Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g00081 ATGAAGACCAAGACGCCATTGAAGCAGCTCAAGCTCTCTGTTCCCGTTCAAGAAACTTCCATCCGTTCTTTCCTGACTGCAAGTGGAACATTTCATGACGGCAATCTACTCCTGAATCAGAAAGGAATGCGGCTTATATCTGAAGAGAAAGAATCGCAGACTACAGATTCTAAGGAGCTTGATGTTGATTTCTCGTTGGAAGATCTAGAGACTGTGAAAGTTATTGGGAAAGGAAGTGGAGGTGTAGTACAACTTGTTCGACACAAATGGGTTGGAAAACTTTTTGCCTTAAAGGTTGTTATACTGGTGGAACAATTCTACACTCTTGCATCTGTTTTTGGTCATTCTACTTTTGCTTTAAGTTATTCACATATTTTGTTCCTTGGCTTTGTTATAATAGTTGAAGAAGCTGCTGCAGGAAGGTAG 426 40.38 MKTKTPLKQLKLSVPVQETSIRSFLTASGTFHDGNLLLNQKGMRLISEEKESQTTDSKELDVDFSLEDLETVKVIGKGSGGVVQLVRHKWVGKLFALKVVILVEQFYTLASVFGHSTFALSYSHILFLGFVIIVEEAAAGR* 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 576984 577935 + CsaV3_2G001800.1 Csa02g00081 518138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g00081 141 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 102 - -
Csa02g00081 141 SUPERFAMILY Protein kinase-like (PK-like) 61 108 IPR011009 -
Csa02g00081 141 Gene3D Phosphorylase Kinase; domain 1 7 102 - -
Csa02g00081 141 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 102 - -
Csa02g00081 141 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00081 Csa-Chr2:576984 Csa01g02954 Csa-Chr1:25913871 1.96E-24 dispersed
Csa02g00081 Csa-Chr2:576984 Csa02g00036 Csa-Chr2:320884 1.18E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g00081 K04368 - csv:101218848 189.119