Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0652 ATGGCCTTCTTTCATTCCCATTCCCACATTCCTATTCTCACAATTCTCATTCTTTCCACCATGACCATTTCCTTATCTTTCCCAGATTCTGGCCCTGTTATTCCCGTTTCCAATCTCGTCAAATTCCTCGAACGTGTCCAAATCCTCGCCCTTAATTCCGCCGGAAAACTTGATTTTGATCTTAAATTCTACGTTGATTTATCACTTAAATTCGATTTGGCTTCCACGGAACGGGCATTTGATGCCTTGCAAAACACTGCTGTTAATGGCTCTGTTTCCTCTCAGGATTTTAAAAACTTTATCCGGAAGTTTTTTGAGAGTGCAGGGAGTGATTTGGTCTACTCCCAACCACTTGATTTTGTTCCTTTTCCTTTGGGATTCTTGCCCAAAGTGGAGAATTCGGAAGTCAGGAATTGGGCTTTGGAAATTCATCGTTTTTGGAAGAATCTTACTCGGAAAGCTTCTCTTGATGTTCATCATCGCCCCGATTTACATACTCTGCTTCCCTTGCCGGATTCTTGTGTCATTCCCGGATCAAGATTCCGGGAAGTTTATTACTGGGATTCGTATTGGGTTATCCGAGGCTTGCTGGCAAGTAAAATGTATGAGACTGCAAAGGGAATTGTAACCAATTTGATTTCGATGATAGATGAATATGGTTTTGTTCTGAATGGTGCCAGGGCTTATTACACTAACAGAAGTCAGCCTCCCCTCTTGAGTTCCATGGTTTATGATATATACCTTAGGACGAACGATATCGAATTCGTAAGGAATGCACTTCCTGCGTTGATCAAAGAGCATAAGTTTTGGAATTCAGGATTCCATTCGGTCAGCATCGAAAAAGTCCATGTTGGTCGAACTCATTATTTAAGTAGGTATTATGCTATGTGGAACGAACCCCGGCCTGAATCTTCAATAATGGATCAGAAACTTGCCTCCAAGTTCTCAAATAACTATGAAAAGCAGCATCTTTACCGAGAAGTGGCTTCAGCAGCTGAGTCAGGCTGGGATTTCAGTACAAGATGGATGAGGGATCCCTCGGATTTATCGACATTGGCAACAACTTCAATCTTGCCGGTTGATCTCAATGCATTTATACTCAAGATGGAACTTGACATCACTAAATTGGCAACAGCTACTGGTGATTTATGCACTGCAAAGCACTTTTTGAAGGCCTCTCTAATTAGAAAGAAAGCAATCAACTCAGTTTTTTGGAGTGCAGAGAAGGGACAGTGGCTTGATTACTGGCTAAACAATACTACTTACAAGGGAGCACAAACATGGGATTCTCAGAACCAGAATCAGAACATATTTGCTTCAAATTTCATTCCTTTGTGGATTGAGTCATTCTACTCAGATAATAGACAATTGAAGAAAGCCCTGAAAAGTTTACAGAACTCAGGCTTGCTTTGTAGTGCTGGGATTGCAACCTCAGTGACTAATTCAGGAGAACAATGGGACTTTCCGAATGGTTGGGCACCAATTCAGCACATGATTGTTGAAGGTCTGGTAAGATCAGGGTTGAGAGAAGCGAGGGAATTGGCGAAAGATATCGCCACGAGGTGGCTACGAACCAACTATGTAGCTTACAAGAAAACAGGTTTTATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTCGGTGGAGGAGGAGAATATGTGCCTCAGACTGGTTTTGGGTGGTCAAATGGAGTTGTTTTGGCATTCCTTGAAGAGTTTGGATGGCCTGAAGATCAAAAGATAGACTGCTATTGA 1758 41.98 MAFFHSHSHIPILTILILSTMTISLSFPDSGPVIPVSNLVKFLERVQILALNSAGKLDFDLKFYVDLSLKFDLASTERAFDALQNTAVNGSVSSQDFKNFIRKFFESAGSDLVYSQPLDFVPFPLGFLPKVENSEVRNWALEIHRFWKNLTRKASLDVHHRPDLHTLLPLPDSCVIPGSRFREVYYWDSYWVIRGLLASKMYETAKGIVTNLISMIDEYGFVLNGARAYYTNRSQPPLLSSMVYDIYLRTNDIEFVRNALPALIKEHKFWNSGFHSVSIEKVHVGRTHYLSRYYAMWNEPRPESSIMDQKLASKFSNNYEKQHLYREVASAAESGWDFSTRWMRDPSDLSTLATTSILPVDLNAFILKMELDITKLATATGDLCTAKHFLKASLIRKKAINSVFWSAEKGQWLDYWLNNTTYKGAQTWDSQNQNQNIFASNFIPLWIESFYSDNRQLKKALKSLQNSGLLCSAGIATSVTNSGEQWDFPNGWAPIQHMIVEGLVRSGLREARELAKDIATRWLRTNYVAYKKTGFMHEKYDVQKCGDFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQKIDCY 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4698133 4701543 - evm.model.ptg000001l.652 HCH5g0652 544804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0652 585 PANTHER TREHALASE 42 584 IPR001661 GO:0004555(PANTHER)|GO:0004555(InterPro)|GO:0005991(InterPro)|GO:0005993(PANTHER)
HCH5g0652 585 Coils Coil 447 467 - -
HCH5g0652 585 Gene3D - 41 583 IPR012341 GO:0005975(InterPro)
HCH5g0652 585 ProSitePatterns Trehalase signature 2. 485 494 IPR018232 GO:0004555(InterPro)|GO:0005991(InterPro)
HCH5g0652 585 PRINTS Glycosyl hydrolase family 37 signature 325 342 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
HCH5g0652 585 PRINTS Glycosyl hydrolase family 37 signature 400 416 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
HCH5g0652 585 PRINTS Glycosyl hydrolase family 37 signature 219 237 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
HCH5g0652 585 PRINTS Glycosyl hydrolase family 37 signature 357 374 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
HCH5g0652 585 PRINTS Glycosyl hydrolase family 37 signature 478 494 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
HCH5g0652 585 PRINTS Glycosyl hydrolase family 37 signature 290 307 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
HCH5g0652 585 PRINTS Glycosyl hydrolase family 37 signature 558 571 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
HCH5g0652 585 SUPERFAMILY Six-hairpin glycosidases 53 577 IPR008928 GO:0005975(InterPro)
HCH5g0652 585 Pfam Trehalase 57 575 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0652 K01194 - csv:101208719 929.858