Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0129 ATGGCTCTTTTCTCATCCAAAGTCTTAATCTCGTTACTCGTCCAGTTATCTTTTCTATTTAACGGTCTGATCGCCAAACACGGTGACACCACCACCCATAACGACCACCACCACCACCATCGCGCCCGATCACCGACCCCGAACCCGAACCCGAACCCAAGGCTCCATCAAGCATTCCTTGCACTCCAAGCATGGAAAAAAGTAATTTACTCCGACCCAAAAAACCACACCACAAATTGGGTGGGGCCGTCAGTTTGCAACTACTTTGGAATATACTGTGCCCCATCTCTCGACGACCCAAATCTCCAAGTCGTCGCCGGAATCGACTTAAACCACGGCGACATCGCCGGATTCCTCCCTACCGAATTGGGTCTTTTAACAGAGCTTGCTCTGTTCCATCTCAACAGCAACCGTTTCTGCGGCATTTTGCCAAATTCTTTATCCAATTTATCTCTTCTCTTCGAACTCGATTTAAGCAACAACAGATTCGTAGGCCCTTTTCCTTCCGTTGTTCTTCATCTTCCCAAATTAAAATATCTCGATCTTCGATTCAACGAATTCGAAGGCTCAATTCCTCCTGAACTCTTCAACAAATCCCTCGACGCCATTTTTGTCAACAGCAACCGTTTCACCAACATTATCCCTCGAAACATCGGCGGAAAATCAGCCTCTGTGATTGTTTTTGCCAACAACAATTTAAAGGGTTGTCTTCCACCGACGATTGCAAGCTTTGCAAACAGTTTGGAAGAACTTTTGTTGATCAACACTAGTTTATCGGGCTGTTTGCCGCAAGAAATTGGGTTTTTGTACAAATTGAAGGTTTTGGATGTGAGTTTTAACAAATTAGTGGGTCCTTTGCCTTATAGTCTGGCTGGGTTAGCTCAATTGGAGCAATTGAATTTGGCCCACAATTTGTTTAGTGGGAATTTGTTTGAAGGTCTCTGTAACCTTCCGAATTTGGAGAATGTGAGGATTTCTTACAATTTCTTTTGTGAAGAAGAGGGGATTTGCCGGAATTTGACGGCGAAGGGGATTGGATTTGATGATCGTCGGAATTGTTTACCGGAGAAGCCGTTGCAGAGGAGTAAGAAGGAGTGTAGTGCGGTGGTTGAGCGTCCGGTGGATTGTTTTGCGCATCCGTGCGGCGGCGGCGGTGGATATGGTTCTAGTATTGCGGCGGTTCCGGCTTCGACGCCCGTTTCTTCACCTTATTCCGTTGTTGCCCCTGCCTACTTGTGA 1239 46.33 MALFSSKVLISLLVQLSFLFNGLIAKHGDTTTHNDHHHHHRARSPTPNPNPNPRLHQAFLALQAWKKVIYSDPKNHTTNWVGPSVCNYFGIYCAPSLDDPNLQVVAGIDLNHGDIAGFLPTELGLLTELALFHLNSNRFCGILPNSLSNLSLLFELDLSNNRFVGPFPSVVLHLPKLKYLDLRFNEFEGSIPPELFNKSLDAIFVNSNRFTNIIPRNIGGKSASVIVFANNNLKGCLPPTIASFANSLEELLLINTSLSGCLPQEIGFLYKLKVLDVSFNKLVGPLPYSLAGLAQLEQLNLAHNLFSGNLFEGLCNLPNLENVRISYNFFCEEEGICRNLTAKGIGFDDRRNCLPEKPLQRSKKECSAVVERPVDCFAHPCGGGGGYGSSIAAVPASTPVSSPYSVVAPAYL 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1454145 1455673 + Hsped.02g01290.1 Hepe02g0129 561630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0129 412 MobiDBLite consensus disorder prediction 30 53 - -
Hepe02g0129 412 FunFam Leucine-rich repeat extensin-like protein 1 59 220 - -
Hepe02g0129 412 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 28 391 IPR051582 -
Hepe02g0129 412 SUPERFAMILY L domain-like 58 332 - -
Hepe02g0129 412 Pfam Leucine Rich Repeat 176 197 IPR001611 GO:0005515(InterPro)
Hepe02g0129 412 Pfam Leucine Rich Repeat 295 317 IPR001611 GO:0005515(InterPro)
Hepe02g0129 412 Pfam Leucine Rich Repeat 153 171 IPR001611 GO:0005515(InterPro)
Hepe02g0129 412 Pfam Leucine Rich Repeat 271 293 IPR001611 GO:0005515(InterPro)
Hepe02g0129 412 Gene3D Ribonuclease Inhibitor 225 344 IPR032675 -
Hepe02g0129 412 Gene3D Ribonuclease Inhibitor 58 224 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0129 Hepe-Chr2:1454145 Hepe03g0572 Hepe-Chr3:11211999 1.04e-34 dispersed
Hepe02g0129 Hepe-Chr2:1454145 Hepe05g1580 Hepe-Chr5:65390959 1.00e-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0129 - - - 0.0