Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe08g0488 ATGGTGATTCAGAGAGAAATGGAATGGAGAAGATCAAGTTATGTGGTTGTTTTTGTGACTCTCCTCTGTGCATTGGCAATTGCGAGTTCGGAGGGGAGAAGGAGGACGGTCGAAATGGTTCTCTCCAATGCCGGCGGCGATTGCCATCACACGTCGTCGGAATTGGAAGCAGATATGGGCGAGCAGGAGTGCATGAAAGAATTGGCATTGAAGGAATATGATGAAGCTGAAGAATTTGTTCCTTGCATCCAAAAAGAGAAGATGGATAAAGCTATAAGAATTCTTCCTCCTGACATGAAACATGACTTGTTGGATTGTTTAAGAAAGAAAACTATGCTTACTCGTGGTTCTGAACCACATTCTACCTTATTTGATTGGCTTGGCAAGACACTTGACTTGATCTTCGGAGCCTCCACCAATATTCACATCACACATCTAATTAGATCATCGCAAGATTCACCAACACCGCAGCCATCTCCATCTCCATCTCCTTCATCAGAAGAATCACCAGAAAATTCTCCATTACCATCTTCGAGTAAAGCTCCAATGCCATCGTCGAGTGATAATCCTGCCACGGCTCCATCACCAAAATCTCCCCGTGTCAAGGCTCCAGTACGGCCATCGCCACCGGACGATACCGATGTTTCGGATTCACCTCCATCTCCTGGAGTTCGCTCACCACCTCGTCCACGTGCTCCTCCCAAGTCTCGCTCTCCAAAGAATCAAGAAGAAAGCGAGACGGCTTCAGAGAATCAAGAAGAAAGCGAGATGGCTTTAGAGAATTATGAAGAAGACGAGACAGTCATAATTGCTTGTATTGTAGGAACTGGTGTGACAGTTATTCTTGTGGTTTTCCTGTTTTTGTTCTGCTGCGGTAGTGATGAGGAAAGTGATCAGGAAAGTGATCCGAAGGCTGGGCAAAAGGTTGAGAAACCTTTTCTCAACATACCTTTGAGCGAATTATCAGCTGGTTCTTCACAGAAGTCTTACAGCATTGGAAATACAGCTACCAAAGAGTTGAATGCTGGTAATGGAAATGGAAATAAACCAACCTCTTATGTTAGCAACTTATCAGTGAAGCCTGAAAATGGTACCTCTGTGGTTGAGTCTCCAACATCTGATGGTATATCACCAGCAATAATGCCACCTCTAAAACCCCCTCCTGGGAGACCAATTGCTCAGCCTCCTCCTCCACCTCCATCTGCATCTCCACCAGAACCAGAACCAGAACCAGAACCAGAACCAGAACCAGAACCAGCACCAGCACCAACACCAGCACCAGCACCAGCACCAGCACCAGCACCAGGGCCTCCTCCTCCTCTGCCACCTTCTCTTAACGCCCCACCGCCGCCACCCATGAAAGGTGTCCGGCCCCCACCTGCCCCACCACCGGCAATCCCGGGTAAATCTCAAGCAGGGCCTGTGGGGCCAAATCGGCGTGGAACCAGTGGCCCAAGTATGGATGCGGCGGATTCAGGAAAGACCAAGTTAAAGCCATTCTTTTGGGATAAGGTTCTTGCCAATCCTGGGCAATCCATGGTCTGGCACGAGATTAGTGATGGATCTTTCCAATTCAATGAGGAGATGATGGAGACTCTATTTGGATATACAGCTACGGATACAAACAAAGGCGAGCGCAAGAAAGATTTGAGTTTGGAACCTTCACTACAGTACATTCACATCATCGATGCTAGGAAAGCTCAAAACCTTTCAATTCTCCTACGAGCACTGAATGTGACAACAGCAGAAGTTGTGGATGCCATTCAAGAAGGCAACTCTCTTTCTCTATCAGAGCTTATACAGACATTGTTGAAGATGGCACCAACATCAGAAGAGGAACTGAAACTTAGATTATTTTCAGGGGATCTTTCTCAGATAGGTCCAGCAGAACGTTTCCTCAAAGTGTTGGTGGAGATTCCTTTTGCTTTTAAAAGATTAGAGTGTCTTCTCTTCATGATCTCAATGACGGAAGAAGTCACTAACATTAAAGAGGCATTCGCAACTCTACAGGTTGCTAGCGATAATCTCAGAAACAGCAGGCTATTTCTCAAGCTATTAGAAGCAGTTCTGAAAACTGGAAATCGAATGAACGTGGGGACGTACCGTGGCGGTGCTCAGGCGTTTAAGCTGGACACGCTCTTGAAACTGGCGGATGTTAAAGGAACCGACGGCAAGACTTCGCTCTTACAATTCGTGGTACAAGAGATTAGTCGTTCGGAGGGCATACGAGCAGCCCGCTCTAACAGAGAAAACCGAAGTTCTTCCAGCATAAGCGGCAGCGTGGATACAAGTTTCGAGGACTTGGGCGAGGATTCGGAGGAGCGTCATCGGCAATTAGGGCTTCAGGTGGTTTCTGGTTTGAGCACGGAGCTTAAGGACATTAAAAGAGCGGCAGCCGTAGATGGGGATGGGCTATCGTCGACGATATCGAAACTGGGGCAGTCTCTGTTAAAAAGCAAAGCATTTATAAACGCGGAGATGAAGAGTTTTGACGAAGACAGCAGATTCCAACAATCTCTGATGAAATTTTTGGAAGAAGCAGACGCGGACATTTCGTGGATTGCAGTGGAAGAAAAGAGGATAATGGCACTGGTGAAGAGCACGGTGGATTACTTCCATGGAAACTCTGTAAAGGACGAAGGATTGCGATTGTTTAGTACCGTACGCGACTTCCTGATTGTGTTGGACAAGACGTGTAAACAGGTTAAAGAAGCAGCTGATGCAGCAGCAAAGCAAGCGAAAGTTTCCAAAAAAGAAACTCGAACATTTTCGGTTCGTCAGCAGAATTCAGATCTACGGAAGCGGCTATTTCCGGCGATTGCAGAACGACGGGTTGACGAGGACTCGAGTTCTTCGGACGAGGAAGAAGACGGCGACGACGGCGATAGTTCTTCATCTTCATCATCCTAG 2910 47.04 MVIQREMEWRRSSYVVVFVTLLCALAIASSEGRRRTVEMVLSNAGGDCHHTSSELEADMGEQECMKELALKEYDEAEEFVPCIQKEKMDKAIRILPPDMKHDLLDCLRKKTMLTRGSEPHSTLFDWLGKTLDLIFGASTNIHITHLIRSSQDSPTPQPSPSPSPSSEESPENSPLPSSSKAPMPSSSDNPATAPSPKSPRVKAPVRPSPPDDTDVSDSPPSPGVRSPPRPRAPPKSRSPKNQEESETASENQEESEMALENYEEDETVIIACIVGTGVTVILVVFLFLFCCGSDEESDQESDPKAGQKVEKPFLNIPLSELSAGSSQKSYSIGNTATKELNAGNGNGNKPTSYVSNLSVKPENGTSVVESPTSDGISPAIMPPLKPPPGRPIAQPPPPPPSASPPEPEPEPEPEPEPEPAPAPTPAPAPAPAPAPGPPPPLPPSLNAPPPPPMKGVRPPPAPPPAIPGKSQAGPVGPNRRGTSGPSMDAADSGKTKLKPFFWDKVLANPGQSMVWHEISDGSFQFNEEMMETLFGYTATDTNKGERKKDLSLEPSLQYIHIIDARKAQNLSILLRALNVTTAEVVDAIQEGNSLSLSELIQTLLKMAPTSEEELKLRLFSGDLSQIGPAERFLKVLVEIPFAFKRLECLLFMISMTEEVTNIKEAFATLQVASDNLRNSRLFLKLLEAVLKTGNRMNVGTYRGGAQAFKLDTLLKLADVKGTDGKTSLLQFVVQEISRSEGIRAARSNRENRSSSSISGSVDTSFEDLGEDSEERHRQLGLQVVSGLSTELKDIKRAAAVDGDGLSSTISKLGQSLLKSKAFINAEMKSFDEDSRFQQSLMKFLEEADADISWIAVEEKRIMALVKSTVDYFHGNSVKDEGLRLFSTVRDFLIVLDKTCKQVKEAADAAAKQAKVSKKETRTFSVRQQNSDLRKRLFPAIAERRVDEDSSSSDEEEDGDDGDSSSSSSS 969
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4280551 4283924 + Hsped.08g04880.1 Hepe08g0488 576460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe08g0488 969 SMART it6_source 487 928 IPR015425 -
Hepe08g0488 969 Pfam Formin Homology 2 Domain 492 894 IPR015425 -
Hepe08g0488 969 MobiDBLite consensus disorder prediction 337 373 - -
Hepe08g0488 969 SUPERFAMILY Formin homology 2 domain (FH2 domain) 557 914 - -
Hepe08g0488 969 MobiDBLite consensus disorder prediction 213 235 - -
Hepe08g0488 969 MobiDBLite consensus disorder prediction 743 769 - -
Hepe08g0488 969 MobiDBLite consensus disorder prediction 748 765 - -
Hepe08g0488 969 MobiDBLite consensus disorder prediction 380 408 - -
Hepe08g0488 969 MobiDBLite consensus disorder prediction 337 492 - -
Hepe08g0488 969 MobiDBLite consensus disorder prediction 170 194 - -
Hepe08g0488 969 MobiDBLite consensus disorder prediction 942 969 - -
Hepe08g0488 969 ProSiteProfiles Formin homology-2 (FH2) domain profile. 487 921 IPR015425 -
Hepe08g0488 969 Gene3D Formin, FH2 domain 498 935 IPR042201 -
Hepe08g0488 969 Coils Coil 245 265 - -
Hepe08g0488 969 MobiDBLite consensus disorder prediction 416 470 - -
Hepe08g0488 969 PANTHER FORMIN-RELATED 227 954 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Hepe08g0488 969 MobiDBLite consensus disorder prediction 155 169 - -
Hepe08g0488 969 MobiDBLite consensus disorder prediction 147 259 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0488 Hepe-Chr8:4280551 Hepe10g1418 Hepe-Chr10:50844336 3.40e-109 dispersed
Hepe01g1315 Hepe-Chr1:78361316 Hepe08g0488 Hepe-Chr8:4280551 1.20e-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe08g0488 K28090 - csv:101206094 723.005