Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe08g0652 | ATGGCGGTCGCTGCAAGAGCATTTCGATCAGTGGTGCGATCGAGCAGGCTCCCTCTTCTATCTCCATCTTCTTATGTGTTTGCTGCGCAGAAATCTCACTCTCACACTCTTCTCATTCGTCAGATGAGCTCGGAGGCTCAGAGTATCGCCGCTCGTCTTCAGAGTTCTGGATTGCTACGAAGCCAAGGCCTCATTGGCGGGAAGTGGATTGATGCTTATGATGGGAAGACCATGAAGGTTCATAATCCAGCCAATGGTGAAGTTATAACCAATGTCCCGCTCATGGGAAAAAGGGAGACCGATGATGCTATTTCTTCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAAGCGCTTACGTAAATGGTATGAGCTCCTAATTGCCCACAAAGAAGAGATTGGACAACTTATAACCTTAGAGCAAGGCAAACCCTTAACAGAAGCTGTGGGCGAGACTAACTATGGAGCCAGCTTCATCGAATACTTTTCTGAGGAAGCAAAACGAGTATATGGTGACATAATCTCACCAACTATAGCCGATCGTCGACTTTTTGTCTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTGTTACCCCTTGGAACTTTCCGTTGGCTATGATTACACGGAAGGTTGGACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAACTTACCCCCTTGACAGCTTTAGCAGCAGCTGAGCTCTCACTTCAAGCTGGAATTCCCCCAGGTGTAGTGAATGTTGTTATGGGAGATGCTCCTGCTATTGGGGATGCTATACTTGCAAGTTCCCAGGTAAGAAAAATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAATTGATGGCAGGAGCTGCTGGGACTGTTAAAAGGGTGTCCTTAGAACTTGGTGGCAATGCACCTTGCATAATCTTTGATGACGCAGATGTGGATGTTGCAGTAAAAGGAGCTATTGCAGCGAAGTTTCGAAATAGTGGACAGACTTGTGTTTGTGCCAATAGAATTCTTGTTCAAGAAGGTATATACGAGAAATTTTCAAAGGCTTTCTCAAAAGCAGTGCAAAATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTAGCTCAGGGTTTGAACGTCTCCATGATATAA | 1158 | 45.77 | MAVAARAFRSVVRSSRLPLLSPSSYVFAAQKSHSHTLLIRQMSSEAQSIAARLQSSGLLRSQGLIGGKWIDAYDGKTMKVHNPANGEVITNVPLMGKRETDDAISSAYDAFKSWSKLTAADRSKRLRKWYELLIAHKEEIGQLITLEQGKPLTEAVGETNYGASFIEYFSEEAKRVYGDIISPTIADRRLFVLKQPVGVVGVVTPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSLELGGNAPCIIFDDADVDVAVKGAIAAKFRNSGQTCVCANRILVQEGIYEKFSKAFSKAVQNLQVGDGFGEGVAQGLNVSMI | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 5803528 | 5811369 | + | Hsped.08g06520.1 | Hepe08g0652 | 576624 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe08g0652 | 385 | SUPERFAMILY | ALDH-like | 43 | 380 | IPR016161 | GO:0016491(InterPro) | |
Hepe08g0652 | 385 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 308 | 380 | IPR016163 | GO:0016620(InterPro) | |
Hepe08g0652 | 385 | Pfam | Aldehyde dehydrogenase family | 69 | 379 | IPR015590 | GO:0016491(InterPro) | |
Hepe08g0652 | 385 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 53 | 379 | IPR050740 | GO:0004777(PANTHER)|GO:0006807(PANTHER)|GO:0009450(PANTHER) | |
Hepe08g0652 | 385 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 304 | 311 | IPR029510 | GO:0016491(InterPro) | |
Hepe08g0652 | 385 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 332 | 343 | IPR016160 | GO:0016491(InterPro) | |
Hepe08g0652 | 385 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 75 | 307 | IPR016162 | GO:0016491(InterPro) | |
Hepe08g0652 | 385 | FunFam | Succinate-semialdehyde dehydrogenase I | 75 | 316 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe08g0652 | Hepe-Chr8:5803528 | Hepe09g0747 | Hepe-Chr9:7167395 | 8.06e-71 | dispersed | |
Hepe08g0652 | Hepe-Chr8:5803528 | Hepe08g0653 | Hepe-Chr8:5813364 | 9.24e-264 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe08g0652 | K17761 | - | csv:101217352 | 629.402 |