Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lsi08g01495 | ATGGTACCACCGTATGCGCTTGATTCTCTTTATTGTTCAGAAGACCACTGGGAGAACGACGACGAAGAAGAAGAAAGGGGTTTTCATGAGCAACCTTATTCTAATTTAACAACCGAATCAAGTTCTCCGATTCTGGCAGTGGCAGAGCAGGATCTGTTTTGGGAAAACGATGAATTAATTTCTCTGTTCTCAAGAGAGAAGCCTAATGAACTGTTTAAAACCATTCAGATTGACCCTTCTCTTGCTGCCGCCCGACGAAGCGCCGTCGAGTGGATGCTGAAGGTTAATGCCCATTATTCTTTCTCTGCTCTCACTGCGGTTCTCGCCGTCGATTATTTGGATCGGTTTCTGTCCTGTTTTCATTTTCAAAGAGACAAGCCATGGATGTCTCAGCTTGCTGCTGTTGCTTGTATCTCTCTTGCTGCCAAAGTAGAGGAGACCCAAGTCCCTCTTTTATTGGACCTACAAGTGGAAGACAGTAGATATCTATTTGAAGCCAAGACAATTAAGAAAATGGAGCTTCTTGTGCTCTCTACGCTTCAATGGCGGATGAATCCTGTTACCCCATTTTCTTTTGTGGATTATATCTCAAGGAGGCTTGGATTCAAGGAACATATCTGCTGGGAAATTCTTTGGCAGTGTGAGCGAACTATTCTCTCTGTTATTTTAGAGTCAGATTTTATGTCCTTTCTTCCTTCTGTAATGGCCACCGCTACAATGCTGCACGTTTTCAAAGCTATGGAAGAACCCAACCTCAGCGTTGAATACGATTCCCAGCTTCTTAACATCCTCGGAATCGACAAGGGGAATGTGGAAGAATGCTGTAAGCTGATCTCAAATGCATCAAGAAGAAACGGCAACCAATTCAAGAAACGTAAAATTGGGTCGATTCCGGGTAGCCCGAACGGCGTGATGGACGTGTCATTCAGCTCCGATAGCTCGAACGACTCGTGGTCAGTGGCCTCGTCAGTTTCATCTTCGCCAGAGCCATTAACGAAGAAGAACAGAGCCAATGGATCAATGTCTGGAGATTGCGAAACATTCAGAACCCTCTCTTAA | 1059 | 44.76 | MVPPYALDSLYCSEDHWENDDEEEERGFHEQPYSNLTTESSSPILAVAEQDLFWENDELISLFSREKPNELFKTIQIDPSLAAARRSAVEWMLKVNAHYSFSALTAVLAVDYLDRFLSCFHFQRDKPWMSQLAAVACISLAAKVEETQVPLLLDLQVEDSRYLFEAKTIKKMELLVLSTLQWRMNPVTPFSFVDYISRRLGFKEHICWEILWQCERTILSVILESDFMSFLPSVMATATMLHVFKAMEEPNLSVEYDSQLLNILGIDKGNVEECCKLISNASRRNGNQFKKRKIGSIPGSPNGVMDVSFSSDSSNDSWSVASSVSSSPEPLTKKNRANGSMSGDCETFRTLS | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 23110265 | 23112386 | + | Lsi08G014950.1 | Lsi08g01495 | 669421 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lsi08g01495 | 352 | Gene3D | - | 70 | 185 | - | - | |
Lsi08g01495 | 352 | Pfam | Cyclin, N-terminal domain | 80 | 185 | IPR006671 | - | |
Lsi08g01495 | 352 | CDD | CYCLIN | 85 | 177 | IPR013763 | - | |
Lsi08g01495 | 352 | ProSitePatterns | Cyclins signature. | 85 | 116 | IPR006671 | - | |
Lsi08g01495 | 352 | PANTHER | CYCLINS | 33 | 336 | IPR039361 | - | |
Lsi08g01495 | 352 | PANTHER | CYCLIN D3.1 PROTEIN | 33 | 336 | - | - | |
Lsi08g01495 | 352 | SMART | Cyclin_C_2 | 187 | 313 | IPR004367 | - | |
Lsi08g01495 | 352 | Pfam | Cyclin, C-terminal domain | 187 | 312 | IPR004367 | - | |
Lsi08g01495 | 352 | SUPERFAMILY | Cyclin-like | 169 | 282 | IPR036915 | - | |
Lsi08g01495 | 352 | MobiDBLite | consensus disorder prediction | 305 | 352 | - | - | |
Lsi08g01495 | 352 | Gene3D | - | 186 | 276 | - | - | |
Lsi08g01495 | 352 | SUPERFAMILY | Cyclin-like | 56 | 185 | IPR036915 | - | |
Lsi08g01495 | 352 | SMART | cyclin_7 | 90 | 178 | IPR013763 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Lsi04g01520 | Lsi08g01495 | CCT | |
Lsi04g01520 | Lsi08g01495 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lsi01g00802 | Lsi-Chr1:6327312 | Lsi08g01495 | Lsi-Chr8:23110265 | 5.00E-50 | dispersed | |
Lsi05g00231 | Lsi-Chr5:3074203 | Lsi08g01495 | Lsi-Chr8:23110265 | 4.12E-97 | dispersed | |
Lsi08g01007 | Lsi-Chr8:18603898 | Lsi08g01495 | Lsi-Chr8:23110265 | 1.51E-52 | dispersed | |
Lsi01g00952 | Lsi-Chr1:7729034 | Lsi08g01495 | Lsi-Chr8:23110265 | 3.52E-82 | wgd | |
Lsi03g00524 | Lsi-Chr3:6105614 | Lsi08g01495 | Lsi-Chr8:23110265 | 9.86E-84 | wgd | |
Lsi04g01520 | Lsi-Chr4:22842315 | Lsi08g01495 | Lsi-Chr8:23110265 | 1.82E-103 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lsi08g01495 | K14505 | - | csv:101205442 | 582.022 |