Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch10g0690 ATGATGGTGGAGTTTCATGGAGAAATTCGCCCCCACGATGGAGACAACGAAGAACAGGAAGAAGAGGAAGAAATTAGCTACGATGACCTCAAGAAACGAATGTGGAAAGACAGGCAGAGGCTGAAGAAGATGAAGGAGACGCGTGACAGCGAAGAGCCGGACTCGGCGGCCAGAGAAGAGGCCTCTCGCCGGAAAAAGATGGCCAGAGCCCAAGATTCGATCCTCAAGTATATGGATAAGATAATGGAGGCTTGTAAGGCACAGGGGTTTGTTTATGGGATTGTGCCGGAGAAGGGGAAACCGGTCACCGGCTCCTCCGAGAGCCTCCGCGAGTGGTGGCGGGACGATGTCCGGTTCGAACAAGATGCTCCCATTGCCATAGCTGAATACCTTCCCAAGGTAATCGAAGAAACAGGGCTCGACACGGCGTCGTTTTTGCACCTCCTCCACGATTTACAGGACACCACTTTGGGGTCGATTCTCTCTGCTCTGATGCAGCACTGTATGCCGCCGCAGAGGAAATTCCCGCTGGAGAAGGGATTGGCGCCGCCGTGGTGGCCGACGGGGAAGGAAATTTGGTGGGGGGAACAGGGCGCCGCCGGTGGGCACGGCGTTCCGCCTTACAAAAAGCCCCACGACCTCAAAAAGGCATGGAAAATCAGCCTTCTCGCGGCGGTGATTAAGCACATGTCCCCTGATATGGACAACATGAGGAAACTCGTCCGGCAATCGAAGAATTTGCAGGCGAAAATGACGGCTAAAGAGACGTTAACTTGGACTAAAGTCGTGAACCAAGAAGAAGCCCTCTTGGAATTAACCAAAAAGAGCCTGAAAATCACTGGAGAAGAACATGAAGAAAACAGAGCAGAAGAAGAAGAAACCAGAGCAGAGGAACTCGTTGGAGGGGGAGGGGGAACCACCCATTTTCGAGGGAATGAGAAACGGAAGTGTTTATTCAATCGAGAAACTGCGGGCGACACGGCCCTGTATACTTGCCAGAACAAATGGTGCCCACAGAGCGAGTCCTTGATGGGATTCGTGGACAAGAACGCAAGAACAGAGCACGAGGCGCAGTGCGTATACAGAAACAACGCAGTGGTGGAGGCAGGGCAGTTTTCAGACGAGCATGCGATCGACAATCATCTGAAGAGCGTGGTGGAGTGGATGAACTTGGAGCTGGCGAGGGCAGAGCCGAACAGCAGCGAGGAGGCACGGATGGAGGACAACGGAGATGGGTCCGAGAGCAGGGCGGTGGAGAATTACGGCACCAGGTACTGGAAGGCCGGCGTGGGAGAGGCGACGGTGGACGAGGCGTTTGAGATGCACAGCGAGAGCATGGATTTGAATGTTAGTCCGACGGAAGATGAGGGCTGCCATCAAGATGCCACTTCTATTTGGGATTTGAGATACGAATGGACTGAAGAA 1425 53.68 MMVEFHGEIRPHDGDNEEQEEEEEISYDDLKKRMWKDRQRLKKMKETRDSEEPDSAAREEASRRKKMARAQDSILKYMDKIMEACKAQGFVYGIVPEKGKPVTGSSESLREWWRDDVRFEQDAPIAIAEYLPKVIEETGLDTASFLHLLHDLQDTTLGSILSALMQHCMPPQRKFPLEKGLAPPWWPTGKEIWWGEQGAAGGHGVPPYKKPHDLKKAWKISLLAAVIKHMSPDMDNMRKLVRQSKNLQAKMTAKETLTWTKVVNQEEALLELTKKSLKITGEEHEENRAEEEETRAEELVGGGGGTTHFRGNEKRKCLFNRETAGDTALYTCQNKWCPQSESLMGFVDKNARTEHEAQCVYRNNAVVEAGQFSDEHAIDNHLKSVVEWMNLELARAEPNSSEEARMEDNGDGSESRAVENYGTRYWKAGVGEATVDEAFEMHSESMDLNVSPTEDEGCHQDATSIWDLRYEWTEE 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4728690 4730114 - MC10g0576 Mch10g0690 677783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch10g0690 475 MobiDBLite consensus disorder prediction 26 65 - -
Mch10g0690 475 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 10 416 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Mch10g0690 475 MobiDBLite consensus disorder prediction 397 416 - -
Mch10g0690 475 MobiDBLite consensus disorder prediction 1 65 - -
Mch10g0690 475 FunFam Ethylene insensitive 3-like 1 140 277 - -
Mch10g0690 475 Coils Coil 274 294 - -
Mch10g0690 475 Pfam Ethylene insensitive 3, DNA-binding domain 28 267 IPR047091 GO:0003700(InterPro)
Mch10g0690 475 Coils Coil 27 47 - -
Mch10g0690 475 MobiDBLite consensus disorder prediction 398 414 - -
Mch10g0690 475 Gene3D - 139 276 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Mch10g0690 475 Gene3D - 56 138 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Mch10g0690 475 SUPERFAMILY DNA-binding domain of EIN3-like 146 270 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0690 Mch-Chr10:4728690 Mch6g1072 Mch-Chr6:7712561 3.74E-101 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42455 PF04873 EIN3 2.10E-110 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch10g0690 K14514 - csv:116406094 650.588