Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g0591 ATGGCGGAATCCGAGCGTCGCGCGAAACGCCCTAGAATTACGAGGGGGGAAGATGATTATATGCCTGGAAGTATTATTGAGATTGAGCTTCATAACTTTATGACCTTTAACCACTTGAAATGTAAACCAGGATCACGTTTGAACCTTGTAATTGGGCCTAATGGATCTGGTAAAAGCTCTATTGTATGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCTCAGCTCCTTGGAAGGGCGACTAGTGTTGGAGCATATGTGAAGCGTGGGGAGGAGTCTGGTTATGTTAGAATAACCTTAAGAGGGAACACTAAAGAGGAGAAGATTATGATTACACGTAAAATGGACACACATAACAAATCTGAGTGGTTGTTCAATGGAAAAGTTGTCCCGAAGAAAGATGTAGCTGCAATCATTCAACAATTTAACATTCAAGTTAATAATTTGACTCAATTTTTACCTCAGGACAGAGTTTGTGAGTTTGCCAAATTAACTCCTGTGCAACTTTTAGAAGAGACTGAAAAGGCAGTTGGCGATCCTCAACTTCCAATCCTACATCGTGCACTTGTTGAGAAAAGCCATGACATAAAAAATATTGAACGAGCTGTTGAGAAAAATGGGGACACCTTACATCAGCTAAAGGCATTAAATGCTGAGCAGGAGAAGGATGTTGAGCGTGTTCGTCAAAGAGATGAACTTTTAAAAAAGGTCGAGTCCATGAAAAAGAAACTGCCATGGCTGAAGTATGACATGAAAAAGGCCGAATACATGGAAGTTAAAGAAAAGGAAAAGGAGGCCAAAAAGAAGTTGGATGAAGCTGCTAACATTTTGAATGAATTAAAGGAGCCAATTGAGAAGCAAAAAAAGGAAAAGGCAAAGTTGGATGCTAAAACTAGAAAGTATAGTTCTCTCATTAATGACAATCACAAGAAAAGGATGGAACTTCAGGAAACTGAAAATCGTTTGGGGGTACAAGTGCAAGGAAAATTGAAAGAAATGGAAGATTTAAGGAAACAAGAAGAATCCCTTCAACAGAGAATCTTACAAGCTAAAGAGGAACTTGAAGCTGCTGAATTGGACCTTCAGAATTTGCGTCCTTACGAACATCCCAAGGAAGAAATTGAAGGGCTCCGTGCTCAAATTTTGGAGCTGGAAGATTCTGCGAGTCAGAAAAGAGTTTTGAAGTCAGAGATTGAAAGAAATATATACCAAAAAAGAAATAGTTTAAGGCAATGCCTGGATAGGTTAAAGGATATGGAGAATACTAATACAAAACTACTACAGGCATTGAGGAATTCTGGAGCAGAGAAGATTTTTGAAGCTTATCACTGGCTTCAAGAACATCGCAATGAGTTCAAGAAGGAGGTGTATGGTCCAGTGTTACTAGAGGTTAATGTATCAAATCGGATTCATGCTGACTACTTAGAAGGTCATATTCCATCCTACGTATGGAAGGCCTTCATAACTCAAGATTCTGATGATCGTGACATCATGGTAAAAAACTTGGGCTCATTTGGTGTTCCTATATTAAACTATGTGGGAGGCGAAAGGCGCACAAATCAGCATTTCGAGGTTTCTGAGGAGGTTCGTGCATTTGGCATATATTCCCGGCTAGACCAAGTTTTTGATGCTCCTGCAGCTGTAAAGGAGGTTTTGACCATGCAGTTTGGTTTGGAACATTCATATATTGGTTCAAAGGTAACTGATCAGAAGGCAGATGAGGTCTCAAAATTGGGAATTTTAGATTTTTGGACTCCAGATAACCATTATCGATGGTCTCGCTCTAGATACGGGGGTCATATGTCTGGAAGTGTGGAACCAGTTGATCGCTCACGTCTTCTTTTGTGCAATTTGGATGCGGGAGAAATTGATGAGCTTCGGTCCAGGAAAAGTGAGCTAGAACAGTCTGTCTCTGCCTTAGAAGATAACTGTAAATCATGTCAGAATGAGCTAAGATTGATAGAGGATGAAGAAGCTAAACTCCGCAAACATCGGGATGACATTTTATTTACTGTGCAACATGAGAAGAGAAAACGCCGTGAAATGGAAAATCGTATTGATCAAAGGAAAAAGAAATTAGAATCTATGGAGAGGGAAGATGACTTGGATACTGTTTTGGCCAAGCTTGTCGACCAAGCTGCAAATTTCAATATTCAAAGGTTCCATTGTGCAATTGAAATTAAGACTTTGCTTGTGAAGGCTGTTTCCTATAGACAGAGCTTGACTAAGAACCATATGTCCTCCATTGAAGCTGAATCAAAGATCAAAGAAGTGGAGGTAAATCTGAAGCAGCATGAAAAGCTTGCTCTGCAAGCATCTGTGCAGTTCGAGTACTGCAAGAAGGAAGTTGAGGACTATCGACAGCAACTTTTAGTTGCTAAGAAGCATGCAGAATCTATTGCTGTGATTACACCTGACCTTGAGAAGGAATTTCTTGAGATGGCTACTACAATTGAGGAATTGGAGGCCGCTATTCAAGATAATATTTCGCAAGCTAATTCCATTCTATTCTTAAACCATAATGTGCTCGAGGAATATGAACATCGTCAGCATCAGATAAATACCATTGCACGAAAACTAGAAGCTGATAAACATGAACTGAGGAAGTTTACGGCTGAAGTTGATGAGCTGAAGGGAAATTGGCTCCCAACATTAAGAAAACTTGTTTCTCAGATAAATGTGACTTTTAGCCGCAATTTTCAAGAGATGGCTGTAGCTGGAGAAGTCTTATTGGATGAGCACGATATGGACTTCGATCAATTTGGGATACTCATTAAAGTAAAATTCAGACAAGCAGGTCAGCTCCAGGTTCTCAGTGCACATCACCAATCTGGAGGGGAACGCTCCGTGTCGACGATTCTGTATCTTGTCTCTCTTCAAGACCTTACTAACTGCCCGTTTAGAGTAGTTGACGAGATAAACCAAGGAATGGATCCCATAAATGAACGGAAGATGTTCCAGCAATTGGTGAGAGCTGCCAGTCAAACGAATACACCACAGTGTTTCCTACTTACTCCAAAGTTACTCCCAGAACTGGAATATAGTGAGGCCTGTAGCATTCTAAATATAATGAATGGTCCATGGATCGAACAGCCCTCTAGAGCATGGAGCAATGGAGATAGCTGGGGAACATTGATGAACTACGTAGGAGAAAGCCGATGTTGA 3162 40.67 MAESERRAKRPRITRGEDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKIMITRKMDTHNKSEWLFNGKVVPKKDVAAIIQQFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRALVEKSHDIKNIERAVEKNGDTLHQLKALNAEQEKDVERVRQRDELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANILNELKEPIEKQKKEKAKLDAKTRKYSSLINDNHKKRMELQETENRLGVQVQGKLKEMEDLRKQEESLQQRILQAKEELEAAELDLQNLRPYEHPKEEIEGLRAQILELEDSASQKRVLKSEIERNIYQKRNSLRQCLDRLKDMENTNTKLLQALRNSGAEKIFEAYHWLQEHRNEFKKEVYGPVLLEVNVSNRIHADYLEGHIPSYVWKAFITQDSDDRDIMVKNLGSFGVPILNYVGGERRTNQHFEVSEEVRAFGIYSRLDQVFDAPAAVKEVLTMQFGLEHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHMSGSVEPVDRSRLLLCNLDAGEIDELRSRKSELEQSVSALEDNCKSCQNELRLIEDEEAKLRKHRDDILFTVQHEKRKRREMENRIDQRKKKLESMEREDDLDTVLAKLVDQAANFNIQRFHCAIEIKTLLVKAVSYRQSLTKNHMSSIEAESKIKEVEVNLKQHEKLALQASVQFEYCKKEVEDYRQQLLVAKKHAESIAVITPDLEKEFLEMATTIEELEAAIQDNISQANSILFLNHNVLEEYEHRQHQINTIARKLEADKHELRKFTAEVDELKGNWLPTLRKLVSQINVTFSRNFQEMAVAGEVLLDEHDMDFDQFGILIKVKFRQAGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSEACSILNIMNGPWIEQPSRAWSNGDSWGTLMNYVGESRC 1053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4494478 4511150 + Sed0026614.1 Sed07g0591 719455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g0591 1053 Coils Coil 408 428 - -
Sed07g0591 1053 Coils Coil 300 320 - -
Sed07g0591 1053 Coils Coil 248 296 - -
Sed07g0591 1053 Pfam RecF/RecN/SMC N terminal domain 25 993 IPR003395 -
Sed07g0591 1053 Gene3D - 847 1022 IPR027417 -
Sed07g0591 1053 Coils Coil 842 879 - -
Sed07g0591 1053 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 1045 IPR027131 GO:0000724(InterPro)|GO:0000724(PANTHER)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006281(InterPro)|GO:0016887(InterPro)|GO:0030915(InterPro)|GO:0030915(PANTHER)
Sed07g0591 1053 Coils Coil 747 774 - -
Sed07g0591 1053 Coils Coil 622 666 - -
Sed07g0591 1053 Coils Coil 209 229 - -
Sed07g0591 1053 Coils Coil 671 698 - -
Sed07g0591 1053 Gene3D - 24 212 IPR027417 -
Sed07g0591 1053 Coils Coil 325 359 - -
Sed07g0591 1053 FunFam Structural maintenance of chromosomes 5 849 1020 - -
Sed07g0591 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 996 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed07g0591 Sed-Chr7:4494478 Sed13g0248 Sed-Chr13:1639361 2.10E-20 dispersed
Sed07g0591 Sed-Chr7:4494478 Sed07g0592 Sed-Chr7:4494478 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g0591 K22803 - csv:101210248 1890.93