Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed07g1685 ATGGAAGCCAATTTGGAGGAGCTGAGACAAAGCTTCAGAGATGGAAGAGCAAGGGGTTTTGAATGGAGGAAAACCCAGCTGGTTTCTTTGATTCAGTTCATCCATGACAAAGAAAACGCCATTTTTGAAGCTCTTCATCAAGATCTTGGAAAGCATCCTGTGGAAGTTTTTCGAGATGAGGTTGGAATTGTTCTGAAATCTGCAAATAATGCTTTGTGCTGTTTAAAGAAATGGATGGCCCCTAAAACGAAATATGTTCCATTACTGTTCTACCCAGCAAAAGGAGAAGTTTTGTCTGAACCATTTGGTTTGGTGCTTATAATTTCTTCTTGGAACTTTCCCCTTTCTTTGACATTGGATCCATTGATTGGAGCAATATCAGCAGGCAACACCGTGGTTCTAAAACCGTCAGAATATGCTCCGGCGTGCTCGTCTTTGCTTGCTGCAACACTCCCTCTTTACCTTGATGATAAATGCATCAAGGTTGTGGAGGGTGGAGCTGATGTTTGTGAACAACTTTTACAGCACAAGTGGGATAAGATCTTCTTCACCGGGAGTCCGAGGGTAGGGAGGGTTGTGATGTCTGCAGCTGCAAAGCATTTAACTCCTGTTACTTTAGAGCTTGGGGGAAAATGTCCAGCAATCTTTGATTACGCCTCTGTTCATTCCAATATGAAGGTAGCAGCCAAGAGAATCGTCGGAGGAAAATGGGGGCCTTGTTCCGGGCAGGCGTGCATCGGGATAGATTATGTGCTTGTGGAAGATAAATTTGCTTCAGAATTGATCGAGTCGTTAAAGCGAATAATGAAGAAGTTTTATGGCGAAAACCCGAAGAACTCGATTAGCTTAGCCCGAATTGTTAACGAGCAACATGTTGAAAGAATTAGCAATCTTCTTAAAGACCCCAAGGTTGCTGCTTCAATTGTTCATGGTGGTTCCACAGACAAACTAAAACTCTTCATTGAGCCAACAATATTGTTGAATCCTCCATTCGATGCCGATATCATGACCGAAGAAATCTTCGGTCCTCTGTTACCAATAATCACTTTGAACAAAATTGAAGAAAGCATTGAGTTCATCAACTCAAGACCAAAACCTCTAGCTTTATATGCCTTCACAGATGACGAAACTCTCAAGAAACGAATTCTATTCGAAACGTCATCGGGAAGTGTCACATTTAATGATACCATGGTTCAGTTCGTGTGCGATTCGCTACCATTCGGTGGTGTTGGTCAGAGCGGTTTTGGTAGTTACCATGGCAAGTATTCTTTTGATGCATTCAGCCATGAAAAAGCAGTGTTGCAGAGAAGCTATTTGCTAGAACTCGAGCCACGATATCCGCCATGGAACGATTTCAAGCTCAAGTTCATCAGATTGGCGTATCGGTTCGACTATTGTGGGCTGATACTGCTTCTTTTGGGGTTAAAAAAGTAG 1434 42.61 MEANLEELRQSFRDGRARGFEWRKTQLVSLIQFIHDKENAIFEALHQDLGKHPVEVFRDEVGIVLKSANNALCCLKKWMAPKTKYVPLLFYPAKGEVLSEPFGLVLIISSWNFPLSLTLDPLIGAISAGNTVVLKPSEYAPACSSLLAATLPLYLDDKCIKVVEGGADVCEQLLQHKWDKIFFTGSPRVGRVVMSAAAKHLTPVTLELGGKCPAIFDYASVHSNMKVAAKRIVGGKWGPCSGQACIGIDYVLVEDKFASELIESLKRIMKKFYGENPKNSISLARIVNEQHVERISNLLKDPKVAASIVHGGSTDKLKLFIEPTILLNPPFDADIMTEEIFGPLLPIITLNKIEESIEFINSRPKPLALYAFTDDETLKKRILFETSSGSVTFNDTMVQFVCDSLPFGGVGQSGFGSYHGKYSFDAFSHEKAVLQRSYLLELEPRYPPWNDFKLKFIRLAYRFDYCGLILLLLGLKK 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15029591 15032454 + Sed0008329.1 Sed07g1685 720549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed07g1685 477 PANTHER ALDEHYDE DEHYDROGENASE 3 475 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(InterPro)|GO:0006081(PANTHER)
Sed07g1685 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 210 413 IPR016163 GO:0016620(InterPro)
Sed07g1685 477 FunFam Aldehyde dehydrogenase 210 413 - -
Sed07g1685 477 Pfam Aldehyde dehydrogenase family 9 433 IPR015590 GO:0016491(InterPro)
Sed07g1685 477 PIRSF ALDH 1 470 IPR012394 GO:0006081(InterPro)
Sed07g1685 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 431 IPR016162 GO:0016491(InterPro)
Sed07g1685 477 FunFam Aldehyde dehydrogenase 9 219 - -
Sed07g1685 477 SUPERFAMILY ALDH-like 2 449 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed05g1143 Sed-Chr5:11860219 Sed07g1685 Sed-Chr7:15029591 7.00E-109 dispersed
Sed06g1004 Sed-Chr6:14802316 Sed07g1685 Sed-Chr7:15029591 1.10E-133 dispersed
Sed07g1685 Sed-Chr7:15029591 Sed12g1865 Sed-Chr12:29840797 1.90E-32 dispersed
Sed07g1685 Sed-Chr7:15029591 Sed05g1142 Sed-Chr5:11860219 1.30E-158 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed07g1685 K00128 - csv:101221321 827.78