Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g0015 | ATGTTCCATCCGAAGAAAGCGTCGAGTAATATGAATAATTCTCATGAGAGAGCAGCAGCTGGGATGTGCGTTCAAGGCGACTCCGGCCTCGTCCTCACCACCGACCCCAAGCCCCGCCTCCGTTGGACTGTCGAGCTTCATGAGCGCTTCGTCGATGCTGTCACTCAGCTCGGAGGCCCTGATAAGGCCACCCCAAAAACCATCATGAGAGTTATGGGTGTAAAAGGTCTTACTCTTTACCACCTCAAGAGCCATCTCCAGAAATTTAGACTGGGAAAGCAGCCTCACAAGGAATTCAATGATCACTCAATTAAGGATGGTATGAGAGCTTCAGGTCTTGAACTTCATCGAAACACGGCTTCTTCATCCAATATGATCAACCGCACCATGAATGATGGTAACTCACACATGGTTGATGCGATTAGGATGCAAATGGAGGTGCAGCGAAGATTACACGAACAATTAGAGGTACAAAGACACTTGCAGTTGCGGATCGAGGCACAAGGGAAGTATATGCAGAGTATATTAGAGAAGGCTTGTCAAACCCTCGCCGGTGAAAACATGGCAGCTTCCGGCGGGGGATACAAGGCCATGGGTGGCAATATCCCAAATAATAATAACGGACAGGGCGGTGGCATTGGGGACATGGGCGGAGGAGCTGGCATCAAAGATTTTGGATTCCCTTCTTTTCAAGACCTCAACCTCTATGGATCAGGAAGCGACCAGCTCGACCTTCAGCAAAACGTGGACGGATTCATGGCTCACAATGAAAGCTTACTGTGCTTGGGAAAGAAGAAGCCGAGGCCACCGCCGGCAAATTACGGATCGGGAAAAGGTGCGTTGGACTGGGCGGATGATCTCCGGCTGCAAGACATAGGAATGGCGCCGCCGTCGCAAGAAGATGATGATCATTTCAAAGCTGGCATTGGTGCAACGCTGGTGGAAAGAGATCATTTGGAGGAAATGTATGAGGCCAAGCCAGTGGTGTCGGATGACACTGCGCCCTTAAAGCTTCAGAGGCCGTCGCCCAGAAGGACACCCCTTTCGGCGGATAGACCCAATCAGCCTCTTACCAGCGCTCCTCAGCCCACACTTTCACCTTTTGGTTAA | 1110 | 50.9 | MFHPKKASSNMNNSHERAAAGMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASGLELHRNTASSSNMINRTMNDGNSHMVDAIRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAASGGGYKAMGGNIPNNNNGQGGGIGDMGGGAGIKDFGFPSFQDLNLYGSGSDQLDLQQNVDGFMAHNESLLCLGKKKPRPPPANYGSGKGALDWADDLRLQDIGMAPPSQEDDDHFKAGIGATLVERDHLEEMYEAKPVVSDDTAPLKLQRPSPRRTPLSADRPNQPLTSAPQPTLSPFG | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 571209 | 573821 | - | Tan0003439.2 | Tan02g0015 | 742641 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g0015 | 369 | MobiDBLite | consensus disorder prediction | 323 | 369 | - | - | |
Tan02g0015 | 369 | Pfam | Myb-like DNA-binding domain | 39 | 89 | IPR001005 | - | |
Tan02g0015 | 369 | Gene3D | - | 36 | 94 | - | - | |
Tan02g0015 | 369 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 9 | 199 | IPR046955 | GO:0003700(InterPro) | |
Tan02g0015 | 369 | FunFam | Myb family transcription factor | 36 | 94 | - | - | |
Tan02g0015 | 369 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 37 | 92 | IPR006447 | GO:0003677(InterPro) | |
Tan02g0015 | 369 | SUPERFAMILY | Homeodomain-like | 36 | 92 | IPR009057 | - | |
Tan02g0015 | 369 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 34 | 94 | IPR017930 | - | |
Tan02g0015 | 369 | MobiDBLite | consensus disorder prediction | 348 | 369 | - | - | |
Tan02g0015 | 369 | Pfam | MYB-CC type transfactor, LHEQLE motif | 137 | 182 | IPR025756 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0015 | Tan-Chr2:571209 | Tan05g0577 | Tan-Chr5:4195205 | 1.60E-82 | dispersed | |
Tan02g0014 | Tan-Chr2:571209 | Tan02g0015 | Tan-Chr2:571209 | 3.10E-195 | tandem | |
Tan02g0015 | Tan-Chr2:571209 | Tan02g0016 | Tan-Chr2:571209 | 1.00E-153 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26636 | PF00249 | Myb_DNA-binding | 2.00E-06 | CL0123 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g0015 | - | - | - | 0.0 |