Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0015 ATGTTCCATCCGAAGAAAGCGTCGAGTAATATGAATAATTCTCATGAGAGAGCAGCAGCTGGGATGTGCGTTCAAGGCGACTCCGGCCTCGTCCTCACCACCGACCCCAAGCCCCGCCTCCGTTGGACTGTCGAGCTTCATGAGCGCTTCGTCGATGCTGTCACTCAGCTCGGAGGCCCTGATAAGGCCACCCCAAAAACCATCATGAGAGTTATGGGTGTAAAAGGTCTTACTCTTTACCACCTCAAGAGCCATCTCCAGAAATTTAGACTGGGAAAGCAGCCTCACAAGGAATTCAATGATCACTCAATTAAGGATGGTATGAGAGCTTCAGGTCTTGAACTTCATCGAAACACGGCTTCTTCATCCAATATGATCAACCGCACCATGAATGATGGTAACTCACACATGGTTGATGCGATTAGGATGCAAATGGAGGTGCAGCGAAGATTACACGAACAATTAGAGGTACAAAGACACTTGCAGTTGCGGATCGAGGCACAAGGGAAGTATATGCAGAGTATATTAGAGAAGGCTTGTCAAACCCTCGCCGGTGAAAACATGGCAGCTTCCGGCGGGGGATACAAGGCCATGGGTGGCAATATCCCAAATAATAATAACGGACAGGGCGGTGGCATTGGGGACATGGGCGGAGGAGCTGGCATCAAAGATTTTGGATTCCCTTCTTTTCAAGACCTCAACCTCTATGGATCAGGAAGCGACCAGCTCGACCTTCAGCAAAACGTGGACGGATTCATGGCTCACAATGAAAGCTTACTGTGCTTGGGAAAGAAGAAGCCGAGGCCACCGCCGGCAAATTACGGATCGGGAAAAGGTGCGTTGGACTGGGCGGATGATCTCCGGCTGCAAGACATAGGAATGGCGCCGCCGTCGCAAGAAGATGATGATCATTTCAAAGCTGGCATTGGTGCAACGCTGGTGGAAAGAGATCATTTGGAGGAAATGTATGAGGCCAAGCCAGTGGTGTCGGATGACACTGCGCCCTTAAAGCTTCAGAGGCCGTCGCCCAGAAGGACACCCCTTTCGGCGGATAGACCCAATCAGCCTCTTACCAGCGCTCCTCAGCCCACACTTTCACCTTTTGGTTAA 1110 50.9 MFHPKKASSNMNNSHERAAAGMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASGLELHRNTASSSNMINRTMNDGNSHMVDAIRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAASGGGYKAMGGNIPNNNNGQGGGIGDMGGGAGIKDFGFPSFQDLNLYGSGSDQLDLQQNVDGFMAHNESLLCLGKKKPRPPPANYGSGKGALDWADDLRLQDIGMAPPSQEDDDHFKAGIGATLVERDHLEEMYEAKPVVSDDTAPLKLQRPSPRRTPLSADRPNQPLTSAPQPTLSPFG 369
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 571209 573821 - Tan0003439.2 Tan02g0015 742641
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0015 369 MobiDBLite consensus disorder prediction 323 369 - -
Tan02g0015 369 Pfam Myb-like DNA-binding domain 39 89 IPR001005 -
Tan02g0015 369 Gene3D - 36 94 - -
Tan02g0015 369 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 199 IPR046955 GO:0003700(InterPro)
Tan02g0015 369 FunFam Myb family transcription factor 36 94 - -
Tan02g0015 369 NCBIfam myb-like DNA-binding domain, SHAQKYF class 37 92 IPR006447 GO:0003677(InterPro)
Tan02g0015 369 SUPERFAMILY Homeodomain-like 36 92 IPR009057 -
Tan02g0015 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 94 IPR017930 -
Tan02g0015 369 MobiDBLite consensus disorder prediction 348 369 - -
Tan02g0015 369 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0015 Tan-Chr2:571209 Tan05g0577 Tan-Chr5:4195205 1.60E-82 dispersed
Tan02g0014 Tan-Chr2:571209 Tan02g0015 Tan-Chr2:571209 3.10E-195 tandem
Tan02g0015 Tan-Chr2:571209 Tan02g0016 Tan-Chr2:571209 1.00E-153 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26636 PF00249 Myb_DNA-binding 2.00E-06 CL0123 Tan TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0015 - - - 0.0