Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0023 ATGGTGGCTACCAAGGCTAAAGTCTGCCTGGATCCGGGTCTGCCTACTGAGGATAATCGCACCCGTAGGAGTGCAATAGGAAGTTTTAAGGTTTATACGGAGAAAGATAAGATTAAAGCTGATTCCTGTTGCAAGAAACCTGTAACAATAAAAAAGGAGCCTTCAACCGATTGTACTATTCAACCAAAGGGAGGCCTGGAACGCTCAGAGAAGAACACGGAGAAAATTGAAGTTTCTGGAGCCAAAAGCATGAGAAGAAGAGCATTGGCAGATGTGAGTAATGTCCGAGGCAACTTTTCTTGGAGAACAATGCAAGATGGCTCCAAGCATAAGGTTTCAACTGGGACTAGAGCTAGCACTGCTGGCGTCAATGTCTCCTTTAGGAAATCATTGGGAAAAACAGCGAAGAATGCAGGGGAAGCTGTTGGTGACTTGCATGCTTCAGAAAAAGGGCGTGTTAAAGATTCAAAAGGTTGTTCGGTCTATGAAAGAAACAAAACAGATGGCCCCTGCTGTGATTCCAATACTGCCAGGAGAATTAAAAAGATCTCTCTTGTGCAAACAAGGAGATCTTTACCAATGCTAAAGAGGATGAACCAGGCAAATGCTTCGAACCTAAAGGATGTTACTGAGAAGCCAGAAAAGACCAATCGATCTCAAGCATGTTTGACTAAATCTGGCAAGACTGCTATCCAGGCAAAAAATTCCAGAAGTCAGCTAAAGAATAATCGTGTGAGCGATGGCTTCATTATAATGGGTCAAGCCAAGGTGGACTCAAATGCACTGTCGAAAAAGTCTACTAAGCCCATACTAAGGAGCATGAAGAAGGCTTCTGGTACTCAAGAGGCACCAAAACCCAAATATGCATCAGCTGTAATCAAATCAATTTCTAGTACTGCATCATCATCCAAGATTGTGGAACCCCCAGTATCTCTTTGTGAGGACATAACTAATGTGTCCCTTCAAGGGAAGGATGCATCTGAACCTACTTGTAATCCAAGTACGAGTTCAGATTTCACTGTCAAGAAAAAAGTTGGTCGTAGGAGATCATATACATCCTTGTTGGTCGCTGGAGCAAAGTTGCTGGATAAATGTGCTGTAGTTACAGAGATAGCTAACCTACCGAGTATTGACAATGACTACAACCAAATGGAGGTTGCTGAATACGTTGAGGAGATATATCATTATTATTGGGTTACAGAGGTACACTTCAAATTTGACTTGATGCCTGAAACACTATTTCTCTCTGTTACATTGTTTGATCGGTATCTCTCCCAAGTCATAATCAAGAAGAATGAAATGCAGTTGGTTGGCCTTACTGCACTGTTATTGGCATCGAAATATGAAGATTTTTGGCATCCTAGGGTTAAAGATCTAATTAGCATATCAGCTGAGTCCTACTCAAGAGAGCAAATGCTACAAATGGAAGCGCTCATTCTGAAGAAGTTGAAGTTTCGCTTGAACATGCCGACTCCATATGTTTTTATGTTAAGATTTCTCAAGGCTGCTCAGTCTAATGTTCAGCTTGAACACTTATCATTTTACTTGATTGAGCTGGCCTTGGTTGAATATGAAGCTCTTAGTTTTAAGCCGTCGTTGTTATGTGCATCGGCTCTATATGTGGCACGGTGTACATTGCGGATAAGTCCATACTGGACCCCACTACTAAACAAACATACACGCTACGAAGTATCCCAAATAAGAGAATGTGCTGAGATGATCTTGAACTTTCACCAATCTGCTCAATTGGGACAGCTGAAAGTCACGTATGAGAAGTACATGAAACCTGATTTTAATGGTGTTGCGGCTGTAAAGCCACTCGGCAAGCTTCCTCTTTGA 1839 41.92 MVATKAKVCLDPGLPTEDNRTRRSAIGSFKVYTEKDKIKADSCCKKPVTIKKEPSTDCTIQPKGGLERSEKNTEKIEVSGAKSMRRRALADVSNVRGNFSWRTMQDGSKHKVSTGTRASTAGVNVSFRKSLGKTAKNAGEAVGDLHASEKGRVKDSKGCSVYERNKTDGPCCDSNTARRIKKISLVQTRRSLPMLKRMNQANASNLKDVTEKPEKTNRSQACLTKSGKTAIQAKNSRSQLKNNRVSDGFIIMGQAKVDSNALSKKSTKPILRSMKKASGTQEAPKPKYASAVIKSISSTASSSKIVEPPVSLCEDITNVSLQGKDASEPTCNPSTSSDFTVKKKVGRRRSYTSLLVAGAKLLDKCAVVTEIANLPSIDNDYNQMEVAEYVEEIYHYYWVTEVHFKFDLMPETLFLSVTLFDRYLSQVIIKKNEMQLVGLTALLLASKYEDFWHPRVKDLISISAESYSREQMLQMEALILKKLKFRLNMPTPYVFMLRFLKAAQSNVQLEHLSFYLIELALVEYEALSFKPSLLCASALYVARCTLRISPYWTPLLNKHTRYEVSQIRECAEMILNFHQSAQLGQLKVTYEKYMKPDFNGVAAVKPLGKLPL 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 602421 608064 + Tan0014015.1 Tan02g0023 742649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0023 612 Gene3D - 482 610 - -
Tan02g0023 612 PIRSF Cyclin_A_B_D_E 51 235 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Tan02g0023 612 PIRSF Cyclin_A_B_D_E 188 397 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Tan02g0023 612 PIRSF Cyclin_A_B_D_E 398 611 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Tan02g0023 612 FunFam putative cyclin-B3-1 isoform X3 486 611 - -
Tan02g0023 612 SMART Cyclin_C_2 490 607 IPR004367 -
Tan02g0023 612 SMART cyclin_7 494 576 IPR013763 -
Tan02g0023 612 SMART cyclin_7 397 481 IPR013763 -
Tan02g0023 612 SUPERFAMILY Cyclin-like 384 488 IPR036915 -
Tan02g0023 612 SUPERFAMILY Cyclin-like 489 607 IPR036915 -
Tan02g0023 612 PANTHER CYCLINS 397 594 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Tan02g0023 612 Gene3D - 377 481 - -
Tan02g0023 612 FunFam Cyclin N-terminal domain containing 2 380 485 - -
Tan02g0023 612 Pfam Cyclin, N-terminal domain 394 488 IPR006671 -
Tan02g0023 612 Pfam Cyclin, C-terminal domain 490 606 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0023 Tan-Chr2:602421 Tan05g0055 Tan-Chr5:582263 2.70E-53 dispersed
Tan02g0023 Tan-Chr2:602421 Tan01g3680 Tan-Chr1:101634757 2.80E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0023 K21777 - csv:101213908 943.34