Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g0753 ATGCAGTCAAAGTCTAAAAGTGTGAATCAACTACAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGGTACAATCCCATCTCCTCATCAGCAGCAGGAGGAAACGTGTCTAATTCACCATCACTGGAATGCCCTAATGGTGCTTCAGAATCAAATGATGGTCAGTCAATGTCAAATGATGATTTGAATGAAGAAGATGATGATGACAACACAAAAGATTCACAAGCTGCAAGTTATGGGCAAGGACAGCAGATTGCTGTTTCTACTGCACCTACAGTGCATGGTGGATGTATCACACAGCCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCGTATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCTATGGGTTATCCTCCTTTCCTTGGGATGCCACATGCAAGAATGGCTTTGCCCCTAGAGGTGACACAGGAGCCAGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCGAGGGGTAGTGGTGGACGTTTTGCCAAGAAAAATGAAGTTAACTCTTCGAGCTCTACTATGAAGAACAAGAAATCTGGTTCTGGTCAAGCTATGTCGTCGCAGTCTGCTAGTTCGTCTGGTTCTGAAGCTGTGCCTGGTGCCTTGGCTGAAACCTGGAATTCCTCCCATGGTCAACAAGAAGCAAGGCCCCAGTTGCATGAGGCATATGAAGCTCGTAGTTATGTGAATAGCAGTAGCCATTTTCATAACTACAGTAGCTTCCAAGCTTCGTCATATGGTTTACGCTCTGGTGAGAGAGGTGAAGATGGAGATTGTTCGGGACAGCAACGAGGAAGTATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGA 1026 45.61 MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQQIAVSTAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFHNYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12108676 12122368 + Tan0001493.1 Tan07g0753 758284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g0753 341 MobiDBLite consensus disorder prediction 1 68 - -
Tan07g0753 341 MobiDBLite consensus disorder prediction 308 341 - -
Tan07g0753 341 Gene3D - 165 227 - -
Tan07g0753 341 PRINTS CCAAT-binding transcription factor subunit B signature 168 190 IPR001289 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0753 341 PRINTS CCAAT-binding transcription factor subunit B signature 199 222 IPR001289 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0753 341 ProSiteProfiles NF-YA/HAP2 family profile. 165 225 IPR001289 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0753 341 MobiDBLite consensus disorder prediction 1 93 - -
Tan07g0753 341 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 19 283 IPR001289 GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Tan07g0753 341 SMART cbf3 164 225 IPR001289 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan07g0753 341 MobiDBLite consensus disorder prediction 203 260 - -
Tan07g0753 341 ProSitePatterns NF-YA/HAP2 subunit signature. 170 190 IPR018362 GO:0003677(InterPro)|GO:0016602(InterPro)
Tan07g0753 341 MobiDBLite consensus disorder prediction 224 259 - -
Tan07g0753 341 MobiDBLite consensus disorder prediction 203 219 - -
Tan07g0753 341 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 167 222 IPR001289 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0753 Tan-Chr7:12108676 Tan08g1611 Tan-Chr8:65552975 4.70E-23 dispersed
Tan03g2781 Tan-Chr3:80816904 Tan07g0753 Tan-Chr7:12108676 1.10E-28 transposed
Tan06g0580 Tan-Chr6:4461910 Tan07g0753 Tan-Chr7:12108676 2.00E-44 wgd
Tan07g0753 Tan-Chr7:12108676 Tan09g0832 Tan-Chr9:59520094 2.60E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27913 PF02045 CBFB_NFYA 1.90E-26 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g0753 K08064 - csv:101212961 542.732