Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g0930 | ATGATGATGATGTTCAATGAGATGGGATTTTGTGATGATATGGATTTCCTTTCCGCTCCAATTGTAGAAGGAGATGCCGTAGCTCCACCAGCCGATCCTGAAGTCGTGGTGGAAGATGATTATTCTGATGAAGATATCGATCTCGATGAGCTCGAGAGGAGGATGTGGAGGGATAAGATGCGTCTCAAACGCCTTAAAGAGCAGAGCAAAGTTAAGGAAGGGATCGATATTGCGAAGCAGCGACAATCTCAAGATCAGGCTAGGAGGAAGAAGATGTCGAGGGCACATGACGGGATCTTGAAGTACATGTTGAAGATTATGGAAGTATGTAATGCTCAAGGTTTTGTATATGGAATAATTCCAGAGAAGGGAAAACCAGTTACCGGGGCATCAGATAATCTGCGAGAATGGTGGAAAGACAAGGTCAGATTTGATAGAAACGGACCGGCTGCCATAGCCAAGTACCAGGCAGATAATGCAATTCCCGGACGAAACGATGGGTGTAATTCAATCGGACCAACTCCACACACCTTGCAGGAACTTCAGGATACAACCCTTGGATCTCTTTTATCAGCTCTGATGCAGCACTGTGACCCTCCTCAAAGAAGATTTCCATTGGAGAAAGGTGTTCCTCCACCATGGTGGCCTACTGGAGTCGAGGAATGGTGGCCTCAGCTCGGGTTGCCGAAGGACCAAGGTCCTCCACCTTACAAGAAGCCTCACGACTTGAAGAAAGCATGGAAAGTCGGTGTTTTGACTGCGGTCATCAAACATATGTCCCCTGATATAGCCAAGATCCGCAAGCTTGTTAGGCAGTCTAAATGTTTGCAGGACAAGATGACTGCTAAGGAGAGTGCTACATGGCTTGCTATTATCAACCAAGAGGAGGTCTTGGCTCGGGAGCTCTATCCTGACTCTTGCCCGCCATTATCATCTGGTGGGGGAAGTGGATCGATGGTCATAAACGATTGCAGTGAGTATGATGTAGAAGGTGCTGAGGAGGAACCAAACTTTGATGTTCAAGATCGTAAACCTGATAACCATAGCTCATTCAACTTGGGAATGGAGAGAATTAGAGAACGGGTGCCCCTTAGACAACCACCTTACACAATCAAAGGAGAGGTTGCCACAAACTTGGATTTTATGCGAAAGAGGAAACCGACCAGCGATCTGAACATGATGATGGATCAGAAAATCTATACTTGTGAGTTCCTCCAGTGTCCTTATAGCGAACTCCGTCTCGGGTTTAATGACAGGACGTCCAGAGACAATCATCAGTTGACTTGCCCGTACAGAACTTCTTCAGAGTTCAGTGGTTCAAATTTTCATGTCAATGAGGTCAAACCAGTTATCTTCCCTCAATCGTTCGCCCCACCCAAGCCAGCTCCACCCCCAGTCAGCTCGGTTCCATCCTCTTTTGACTTGTCCAGCTTAGGAGTTCCAGAAGATGGCCAAAAGCTCATCAGTGATCTCATGTCGATCTATGACACCAACATCCAAGGCAACAAGAACAATGTAAACTCTGGTAACGGTGCCATCACAGAGAACCAAAATCTTTCTCAGTTGAAGATCCAATCTCAACAAGACGAATACTTCCGAAATCAAGGAATAATGATCGAGGGAAACTTCTTCGAAGGATCGAACGTTTCGAGCAGCCATCAAATGTTCACAAGAGATGAAGGCCAATTCGACCGGTTTAAGCCAATGAATTCACCTTTTGAAAACAACCACCACCACCATCACCACAACAATAACAACAACAACTTCCACTTGATGTTTGGCTCTCCATTTGATTTGTCGACTTTCGATTACAAAGAAGAAGTACCCGGAGCAGCAGCCATCGATACACTGTCAAAACAGCAGGATATTCCCTTGTGGTATCAGTAA | 1887 | 45.84 | MMMMFNEMGFCDDMDFLSAPIVEGDAVAPPADPEVVVEDDYSDEDIDLDELERRMWRDKMRLKRLKEQSKVKEGIDIAKQRQSQDQARRKKMSRAHDGILKYMLKIMEVCNAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGVEEWWPQLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVLARELYPDSCPPLSSGGGSGSMVINDCSEYDVEGAEEEPNFDVQDRKPDNHSSFNLGMERIRERVPLRQPPYTIKGEVATNLDFMRKRKPTSDLNMMMDQKIYTCEFLQCPYSELRLGFNDRTSRDNHQLTCPYRTSSEFSGSNFHVNEVKPVIFPQSFAPPKPAPPPVSSVPSSFDLSSLGVPEDGQKLISDLMSIYDTNIQGNKNNVNSGNGAITENQNLSQLKIQSQQDEYFRNQGIMIEGNFFEGSNVSSSHQMFTRDEGQFDRFKPMNSPFENNHHHHHHNNNNNNFHLMFGSPFDLSTFDYKEEVPGAAAIDTLSKQQDIPLWYQ | 628 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 61316748 | 61320408 | + | Tan0006541.1 | Tan09g0930 | 763273 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g0930 | 628 | SUPERFAMILY | DNA-binding domain of EIN3-like | 175 | 299 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Tan09g0930 | 628 | Coils | Coil | 48 | 68 | - | - | |
Tan09g0930 | 628 | FunFam | Ethylene insensitive 3-like 1 | 81 | 159 | - | - | |
Tan09g0930 | 628 | PANTHER | ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN | 3 | 611 | IPR006957 | GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro) | |
Tan09g0930 | 628 | Pfam | Ethylene insensitive 3, DNA-binding domain | 49 | 296 | IPR047091 | GO:0003700(InterPro) | |
Tan09g0930 | 628 | FunFam | Ethylene insensitive 3-like 1 | 169 | 306 | - | - | |
Tan09g0930 | 628 | Gene3D | - | 173 | 306 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) | |
Tan09g0930 | 628 | Gene3D | - | 81 | 158 | IPR023278 | GO:0003700(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1371 | Tan-Chr1:13632238 | Tan09g0930 | Tan-Chr9:61316748 | 2.20E-26 | dispersed | |
Tan09g0930 | Tan-Chr9:61316748 | Tan11g1054 | Tan-Chr11:8290917 | 9.90E-205 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28312 | PF04873 | EIN3 | 2.50E-129 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g0930 | K14514 | - | csv:101206055 | 1125.92 |