Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g0930 ATGATGATGATGTTCAATGAGATGGGATTTTGTGATGATATGGATTTCCTTTCCGCTCCAATTGTAGAAGGAGATGCCGTAGCTCCACCAGCCGATCCTGAAGTCGTGGTGGAAGATGATTATTCTGATGAAGATATCGATCTCGATGAGCTCGAGAGGAGGATGTGGAGGGATAAGATGCGTCTCAAACGCCTTAAAGAGCAGAGCAAAGTTAAGGAAGGGATCGATATTGCGAAGCAGCGACAATCTCAAGATCAGGCTAGGAGGAAGAAGATGTCGAGGGCACATGACGGGATCTTGAAGTACATGTTGAAGATTATGGAAGTATGTAATGCTCAAGGTTTTGTATATGGAATAATTCCAGAGAAGGGAAAACCAGTTACCGGGGCATCAGATAATCTGCGAGAATGGTGGAAAGACAAGGTCAGATTTGATAGAAACGGACCGGCTGCCATAGCCAAGTACCAGGCAGATAATGCAATTCCCGGACGAAACGATGGGTGTAATTCAATCGGACCAACTCCACACACCTTGCAGGAACTTCAGGATACAACCCTTGGATCTCTTTTATCAGCTCTGATGCAGCACTGTGACCCTCCTCAAAGAAGATTTCCATTGGAGAAAGGTGTTCCTCCACCATGGTGGCCTACTGGAGTCGAGGAATGGTGGCCTCAGCTCGGGTTGCCGAAGGACCAAGGTCCTCCACCTTACAAGAAGCCTCACGACTTGAAGAAAGCATGGAAAGTCGGTGTTTTGACTGCGGTCATCAAACATATGTCCCCTGATATAGCCAAGATCCGCAAGCTTGTTAGGCAGTCTAAATGTTTGCAGGACAAGATGACTGCTAAGGAGAGTGCTACATGGCTTGCTATTATCAACCAAGAGGAGGTCTTGGCTCGGGAGCTCTATCCTGACTCTTGCCCGCCATTATCATCTGGTGGGGGAAGTGGATCGATGGTCATAAACGATTGCAGTGAGTATGATGTAGAAGGTGCTGAGGAGGAACCAAACTTTGATGTTCAAGATCGTAAACCTGATAACCATAGCTCATTCAACTTGGGAATGGAGAGAATTAGAGAACGGGTGCCCCTTAGACAACCACCTTACACAATCAAAGGAGAGGTTGCCACAAACTTGGATTTTATGCGAAAGAGGAAACCGACCAGCGATCTGAACATGATGATGGATCAGAAAATCTATACTTGTGAGTTCCTCCAGTGTCCTTATAGCGAACTCCGTCTCGGGTTTAATGACAGGACGTCCAGAGACAATCATCAGTTGACTTGCCCGTACAGAACTTCTTCAGAGTTCAGTGGTTCAAATTTTCATGTCAATGAGGTCAAACCAGTTATCTTCCCTCAATCGTTCGCCCCACCCAAGCCAGCTCCACCCCCAGTCAGCTCGGTTCCATCCTCTTTTGACTTGTCCAGCTTAGGAGTTCCAGAAGATGGCCAAAAGCTCATCAGTGATCTCATGTCGATCTATGACACCAACATCCAAGGCAACAAGAACAATGTAAACTCTGGTAACGGTGCCATCACAGAGAACCAAAATCTTTCTCAGTTGAAGATCCAATCTCAACAAGACGAATACTTCCGAAATCAAGGAATAATGATCGAGGGAAACTTCTTCGAAGGATCGAACGTTTCGAGCAGCCATCAAATGTTCACAAGAGATGAAGGCCAATTCGACCGGTTTAAGCCAATGAATTCACCTTTTGAAAACAACCACCACCACCATCACCACAACAATAACAACAACAACTTCCACTTGATGTTTGGCTCTCCATTTGATTTGTCGACTTTCGATTACAAAGAAGAAGTACCCGGAGCAGCAGCCATCGATACACTGTCAAAACAGCAGGATATTCCCTTGTGGTATCAGTAA 1887 45.84 MMMMFNEMGFCDDMDFLSAPIVEGDAVAPPADPEVVVEDDYSDEDIDLDELERRMWRDKMRLKRLKEQSKVKEGIDIAKQRQSQDQARRKKMSRAHDGILKYMLKIMEVCNAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGVEEWWPQLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEVLARELYPDSCPPLSSGGGSGSMVINDCSEYDVEGAEEEPNFDVQDRKPDNHSSFNLGMERIRERVPLRQPPYTIKGEVATNLDFMRKRKPTSDLNMMMDQKIYTCEFLQCPYSELRLGFNDRTSRDNHQLTCPYRTSSEFSGSNFHVNEVKPVIFPQSFAPPKPAPPPVSSVPSSFDLSSLGVPEDGQKLISDLMSIYDTNIQGNKNNVNSGNGAITENQNLSQLKIQSQQDEYFRNQGIMIEGNFFEGSNVSSSHQMFTRDEGQFDRFKPMNSPFENNHHHHHHNNNNNNFHLMFGSPFDLSTFDYKEEVPGAAAIDTLSKQQDIPLWYQ 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 61316748 61320408 + Tan0006541.1 Tan09g0930 763273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g0930 628 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Tan09g0930 628 Coils Coil 48 68 - -
Tan09g0930 628 FunFam Ethylene insensitive 3-like 1 81 159 - -
Tan09g0930 628 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 3 611 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Tan09g0930 628 Pfam Ethylene insensitive 3, DNA-binding domain 49 296 IPR047091 GO:0003700(InterPro)
Tan09g0930 628 FunFam Ethylene insensitive 3-like 1 169 306 - -
Tan09g0930 628 Gene3D - 173 306 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Tan09g0930 628 Gene3D - 81 158 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1371 Tan-Chr1:13632238 Tan09g0930 Tan-Chr9:61316748 2.20E-26 dispersed
Tan09g0930 Tan-Chr9:61316748 Tan11g1054 Tan-Chr11:8290917 9.90E-205 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28312 PF04873 EIN3 2.50E-129 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g0930 K14514 - csv:101206055 1125.92