Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi10g226 ATGGGGGGTAGATGGAACGCTTTTGGATTCCAGTTCTTAATATTTTCAGTTCTGATCATCTTTTTGGGAATTCAAAGGTGTTGGTCGCTTAATTCTGAAGGATTGGCTTTGCTGGAATTCCGGGCAGGAGTGGACTCTGATCCATATGGCGCCTTTTCCAATTGGAATTCCAGTGACAGTGATGGTTGCATGTGGTTGGGTGTTCACTGTTATGACAGTAAAGTGCAAACACTGGATTTGAATGGGCTTTCTTTGGAAGGAATACTGGCTCCTGGGCTTGGGAAACTTAGTCACTTAAGATCCCTTGTACTCCACAAGAACAATTTCTCTGGTACCATTCCTAAAGAGATTGGAGGACTTATAAGGTTGGAGCTATTGGACCTGAGGGATAATAACTTGAGTGGAGTAATTCCAGAAGAAATAGGCTCAATGCCTTCACTGAAACGCTTATTGCTTTGTGACAATAAATTTGAAGGAAGCATTCCTATGGATGCTGGGAAGCTCAATTTGCTCTCTGAATTGCAATTTGATGAAAACCTTACATCTCCTGTTGCCAGTGGAACTGGTTTTGCAAATAGAAAATTTGGACACTGCGTCTGGCAGAGCAGTTTGAAACAACTGAGTAAGGAAGATTCCTTCATAATCCCGATTAAAGGAAGACTTAAACGCTACGTCAATGTCTTGGCACAGTTAAAGTTTGGAAAGGACTCTTCACATGGTCAAGGAGATAATTGCTGTGATACACAACCTAGGGTTCCATCTGAGCTCCACATGGTCCAAGATGTAGAGGATCTAGGTAATTTTGTGAGACGTAGGCTGCTCCAGCAGTCCAGTAACCTTGCAGCTATAGCTGCCAGCGGTGTTGATGGTAGTTCTGGGAATATATGGAAGTATGTTTTCGTGGTTCCAGGTGTGGCACTCTTACTCATTGTTGCTGCAGTCATGCTCTGCATGTGCCGAAGCAGAGGAGTGACAACAATAGGTCCTTGGACGACTGGACTCAGTGGACAGTTGCAGAAAGCATTTGTTACAGGAGTGCCGAAGCTGAATCGAACAGAGCTGGAAACTGCATGCGAGGATTTCAGCAATATTATCAACACTCTGGATGATTGCACTGTGTACAAGGGCACACTGTCAAGTGGAGTAGAGATTGCTGTTGCATCAACTGGAATTTCTTCTTCCAAGGACTGGTCAAAACGCTCAGAAATGGCCTTCCGGAAAAAGATTGATACACTATCACGGGTGAACCACAAGAACTTTGTCAATCTTCTTGGCTACTGTGAGGAGGATGACATTTTCGTAAGAATGATGGTGTTTGAGTATGCTCCAAATGGAAGCCTCTTTGAGCATCTTCACGTTAAGGAAGTGGAACATCTTGATTGGAATGCTAGAACAAGGATAATTATGGGAACTGCTTACTGTCTTCAATACATGCACGAGCTTAATCCGCCTGTAGCACATTCCAATCTGACTTCAGCTGCAATCTATTTGACCGATGATTATGCTGCTAAAATTGCAGAGATCAATATTTGGGCAGACCTTTCATCTAAATCAAAGATCTCAGGCAATGAGGAATCTGAGCATTCTGAATTGCCACCACTTGCTGATCCAGAATCAAATGTCTACTGTTTTGGAATACTGTTGCTGGAAACTATTTCTGGGAAGCTCCCTTACTCTGAAGAACAAGGGCCTCTTGTGAACTGGGCTGCCGAACACTTAAATGACAAAAGAAGCATCAGCTACCTTATTGACCCAACCCTGAAGTCCTTCAAAAACAACGAGCTTGACATCATCTGCGAAGTAATCCAGGATTGCATCCAACCCAATCCAAGGCAGAGGCCGACAATGAGGGAAGTCACTTCAAAACTGAGGGAAGTGATTCCTATTTCACCTGACTCAGCAACACCAAGACTTTCTCCCCTCTGGTGGGCTGAACTTGAGATCCTATCTGTGGAAGCAACCTAA 1965 43.82 MGGRWNAFGFQFLIFSVLIIFLGIQRCWSLNSEGLALLEFRAGVDSDPYGAFSNWNSSDSDGCMWLGVHCYDSKVQTLDLNGLSLEGILAPGLGKLSHLRSLVLHKNNFSGTIPKEIGGLIRLELLDLRDNNLSGVIPEEIGSMPSLKRLLLCDNKFEGSIPMDAGKLNLLSELQFDENLTSPVASGTGFANRKFGHCVWQSSLKQLSKEDSFIIPIKGRLKRYVNVLAQLKFGKDSSHGQGDNCCDTQPRVPSELHMVQDVEDLGNFVRRRLLQQSSNLAAIAASGVDGSSGNIWKYVFVVPGVALLLIVAAVMLCMCRSRGVTTIGPWTTGLSGQLQKAFVTGVPKLNRTELETACEDFSNIINTLDDCTVYKGTLSSGVEIAVASTGISSSKDWSKRSEMAFRKKIDTLSRVNHKNFVNLLGYCEEDDIFVRMMVFEYAPNGSLFEHLHVKEVEHLDWNARTRIIMGTAYCLQYMHELNPPVAHSNLTSAAIYLTDDYAAKIAEINIWADLSSKSKISGNEESEHSELPPLADPESNVYCFGILLLETISGKLPYSEEQGPLVNWAAEHLNDKRSISYLIDPTLKSFKNNELDIICEVIQDCIQPNPRQRPTMREVTSKLREVIPISPDSATPRLSPLWWAELEILSVEAT* 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2776012 2782944 + Vvi10g226 Vvi10g226 770825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi10g226 654 SUPERFAMILY Protein kinase-like (PK-like) 353 623 IPR011009 -
Vvi10g226 654 Gene3D Transferase(Phosphotransferase) domain 1 442 630 - -
Vvi10g226 654 ProSiteProfiles Protein kinase domain profile. 359 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi10g226 654 Gene3D Ribonuclease Inhibitor 29 212 IPR032675 -
Vvi10g226 654 Pfam Protein tyrosine and serine/threonine kinase 372 623 IPR001245 GO:0004672|GO:0006468
Vvi10g226 654 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Vvi10g226 654 PANTHER PROTEIN MALE DISCOVERER 2 1 287 - -
Vvi10g226 654 PANTHER PROTEIN MALE DISCOVERER 2 290 654 - -
Vvi10g226 654 Gene3D Phosphorylase Kinase; domain 1 334 441 - -
Vvi10g226 654 SUPERFAMILY L domain-like 29 184 - -
Vvi10g226 654 PANTHER PROTEIN MALE DISCOVERER 2 1 287 - -
Vvi10g226 654 PANTHER PROTEIN MALE DISCOVERER 2 290 654 - -
Vvi10g226 654 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g226 Vvi12g153 ECH
Vvi10g226 Vvi19g104 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75969 PF07714 PK_Tyr_Ser-Thr 1.20E-21 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi10g226 - - nnu:104611566 858.981