Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g231 ATGTTTACCCGAATTTTCGGCAAGCCTAAGCAGGAAGCCAATGCTTTAACAACGTTGGACAAATTAAACGAGACACTTGAAATGCTAGAGAAAAAAGAGAAAGTACTTCTAAAGAAAGCTGCTGCTGAGGTTGAAAAGGCCAAGGAATTCACTAGGGCAAAAAATAAAAGAGCTGCTATACAGTGTTTGAAAAGGAAGAGGCTATATGAACAGCAAATTGAACAGCTTGGGAATTTCCAATTGCGCATTCATGATCAGATGATAATGTTAGAAGGTGCAAAAGCAACTACTGAGACAGTGGATGCATTAAGAACTGGAGCTGCTGCAATGAAGGCAATGCAAAAAGCAACGAATATTGATGATGTGGATCAGACAATGGATGAGATCAATGAGCAGACTGAGAACATGAAGCAGATTCAGGAAGCATTGTCAACTCCCATTGGTTCAGCAGCTGATTTTGATGAGGATGAGTTGGAAGCAGAACTTGAGGAACTGGAAGGCTTTGAGTTGGAGGAACAACTTCTTCAGCCTGCAACAACTGCTCCTGCAGCTCCAGTCCATGTCCCAGCTGGCCGCCAACCAGCTCGTGCTGCTCCTCAGAAGCGCACAGCTGAGGAAGACGAACTTGCTGCATTGCAGGCTGAGATGGCACTTTAA 657 44.29 MFTRIFGKPKQEANALTTLDKLNETLEMLEKKEKVLLKKAAAEVEKAKEFTRAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDQTMDEINEQTENMKQIQEALSTPIGSAADFDEDELEAELEELEGFELEEQLLQPATTAPAAPVHVPAGRQPARAAPQKRTAEEDELAALQAEMAL* 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2163308 2168217 + Vvi11g231 Vvi11g231 771672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g231 218 Pfam Snf7 20 186 IPR005024 GO:0007034
Vvi11g231 218 Gene3D - 14 91 - -
Vvi11g231 218 Coils Coil 12 39 - -
Vvi11g231 218 Coils Coil 119 142 - -
Vvi11g231 218 MobiDBLite consensus disorder prediction 179 218 - -
Vvi11g231 218 PANTHER SNF7 FAMILY-RELATED 1 218 - -
Vvi11g231 218 Gene3D - 117 171 - -
Vvi11g231 218 Coils Coil 151 171 - -
Vvi11g231 218 Coils Coil 202 218 - -
Vvi11g231 218 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 218 IPR005024 GO:0007034
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g478 Vvi11g231 ECH
Vvi9g222 Vvi11g231 ECH
Vvi4g45 Vvi11g231 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g231 K12194 - vvi:100242218 280.411