Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi11g76 ATGGCAGTGAAGAAGATCACGTGGAGATCGGTTTTCCCGGCATGTTACGGGTCGGAAAAGATGGCGTCCAAGCGGAGGAAGGCGGCAGTGGTGGCGAAGCAGACCTCGTTTCAGAGGATTTCGATATCGGATTTGAGTAATCCGGGGTCGACGCTGTCTGAGGATCTGTCCACCTCTCTGATGGGGTCAAACCTTCATGTGTTCACGCTGACTGAGCTGAAGGTGATCTGCCAGAACTTCTCCTCCAACAACTTCATCGGAGAAGGCGGGTTCGGCCCCGTCCACAAGGGCTTCATTGATGACAAGCTCCGCCCTGGTTTGAAGGCTCAGCCCGTGGCTGTCAAGCTTTTGGATTTGGAAGGCTTGCAGGGCCATCGAGAATGGCTGACAGAAGTGATTTTTCTCGGGCAACTGAGGCACCCGCATCTTGTCAAGCTGATCGGGTATTGTTGCGAGGACGAGCACAGGCTCCTGGTATACGAATACATGCCGCGAGGAAGCTTGGAGAATCAGCTCTTCAGAAGGTACTCTGTTTCTCTTCCATGGTCCACAAGAATGAAAATTGCACTTGGGGCTGCAAAGGGTTTAGCTTTCCTCCATGAAGCGGAGAAACCTGTTATATATCGAGATTTTAAGGCTTCAAACATCTTGTTGGACTCTGATCATACTCCCAAATTATCAGATTTTGGTCTAGCCAAGGACGGCCCTGAAGGTGATGACACACATGTTTCAACCCGAGTAATGGGGACACAAGGGTATGCTGCTCCAGAGTACATTATGACAGGGCATTTGACAGCAATGAGCGATGTTTACAGCTTTGGAGTGGTGCTCTTAGAGCTACTAACTGGGAGAAGATCAGTGGATAAGACCCGGCCTAACAGGGAGCAGAACCTAGCAGAGTGGGCTAGGCCACAACTGAACGATTCCAGGAAGCTTGCCCGCATAATGGATCCAAGACTTGAAGGTCAATACTCAGAAGCAGGGGCTCAGAGCGCTGCTGCATTGGCTTACCAGTGCCTGAGCCACAGGCCAAAGCATAGGCCAACAATGAGCACTGTGGTTAAGACCCTGGAGCCTCTCCAGGACTACAATGAAATTCCAGTTGGGACCTTTGTTTACACTGTCCCAAGCGAAAATGACTTGCCTAAGGAGGAGACGAAGGAAGGAGGAGAAGCACAGAAGGAACCCAAAAAAGAAAGTTCCCATCAAGGCCATAGGCATAGGATGAGATCACCAAAATCCCCAACCATTTATTCAGAAACCGCTCTACGCCAGAACCTCAGAAACAGTCCAAACTCTCCCCTGCATCCCAGGAGCAGGGGAAGTTAG 1329 50.71 MAVKKITWRSVFPACYGSEKMASKRRKAAVVAKQTSFQRISISDLSNPGSTLSEDLSTSLMGSNLHVFTLTELKVICQNFSSNNFIGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLEGLQGHREWLTEVIFLGQLRHPHLVKLIGYCCEDEHRLLVYEYMPRGSLENQLFRRYSVSLPWSTRMKIALGAAKGLAFLHEAEKPVIYRDFKASNILLDSDHTPKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKTRPNREQNLAEWARPQLNDSRKLARIMDPRLEGQYSEAGAQSAAALAYQCLSHRPKHRPTMSTVVKTLEPLQDYNEIPVGTFVYTVPSENDLPKEETKEGGEAQKEPKKESSHQGHRHRMRSPKSPTIYSETALRQNLRNSPNSPLHPRSRGS* 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 867703 869890 - Vvi11g76 Vvi11g76 771517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi11g76 442 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 25 408 - -
Vvi11g76 442 CDD STKc_IRAK 86 360 - -
Vvi11g76 442 MobiDBLite consensus disorder prediction 374 442 - -
Vvi11g76 442 SUPERFAMILY Protein kinase-like (PK-like) 55 358 IPR011009 -
Vvi11g76 442 PANTHER OS01G0588500 PROTEIN-RELATED 25 408 - -
Vvi11g76 442 Pfam Protein tyrosine and serine/threonine kinase 84 357 IPR001245 GO:0004672|GO:0006468
Vvi11g76 442 Gene3D Transferase(Phosphotransferase) domain 1 163 369 - -
Vvi11g76 442 Gene3D Phosphorylase Kinase; domain 1 46 162 - -
Vvi11g76 442 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi11g76 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Vvi11g76 442 MobiDBLite consensus disorder prediction 380 402 - -
Vvi11g76 442 MobiDBLite consensus disorder prediction 414 442 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g173 Vvi11g76 ECH
Vvi9g83 Vvi11g76 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76069 PF07714 PK_Tyr_Ser-Thr 6.50E-47 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi11g76 - - vvi:100257697 863.218