Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1210 ATGTACCTAGAATTCCAAAATTCATTTCAGGATGGGAAACAACCTCAATCACTTACTAAGGGAGAAAAATCCAACCCCGCCATCGTGATTTACAGGGTTGAACAAATTTCAGGGGCTTCTCCTGCTGGATCCACTAAGCTTTTTCGCCAAAACATGGGGATATCCGACTTTGCTGTCGATCCACGAAGCGGGTTCTGCGCGGAAACTAGGACTTTTCACAGCCTCAGACCTACTGTTCAACTTCCACCGGAGAATGTTCTTCTCTCGGCCGATGCATATACTTACTCACTCCGAGCCCCTTCGCCCGGCGATGACTCACCCGTTATCATCAACTCAACCACCGGTCAGCGGCTGTCTTACTCCGAATTCGTCCGCCGCTCCAAAACCTTGGCAGCCTATCTCCAATCGATAGTCGGGCTAAACAAAGGCGACGCCGCGTATATACTCTCTAACAATCTCATTCAAGTTCCGGTGCTGTACTTTGCTCTGCTCTCACTCGGGGTAGTCGTCTCTCCGGCCAATCCAATCAATACCAAAGCCGAAGTCGCCCGCCAAACCCAGCTGTGCAGGCCCGTGATCGCCTTTACCATCTCAACCGCTGTTCACAAGATTCCAAAACTCCGGTACGGAACCATTGTCATCGACTCGTTCGAGTTCGAGTTAATGATGACGAGTCCGAGACGTGAAATGGTCGACGTTAAGGTGAGTCAATCAGATCTGGCGGGGATCATGTACTCGTCGGGGACAACCGGTAATGTCAAGGGAGTGATGGTGACTCACCGGAATTTGATTGCGATGACCGGGAGTTATATGCAACGGAAGGCCAATTCGCCGGTAGTGCTACTGCAGATATATGATTTGGAGAAAACGATTGATGCAGTGGAGAAGTACAAGGTGACGGACTTGGCTGTTGCTCCACCAGTGGTGGTGGCCATGTCGAAAAAGGCTGTAACGGAGGGCCGCGATTTGAGTTCTTTGGAAACCGTGGCGTCCGGGGGAGCCCCTCTCGGCAAGGAACTGATCGAAGCATTCACAGCCAAGTTCCCCGGCACAGTGATCAGCCAGGGTTACGGGATGACTGAAGTAATTGGAAGAATCTCCGAAGCATTGGATCGGGAAGAATGTTCCCGCTGGGGCTCATCAGGAAAGTTTCCAGGAATTTGGGAAGCCAAAATTGTTGATCAGGAAACAGGCGCTTCACTGCCTCCACTCAAGCGGGGGGAGCTTTGGGTGAAAGGACCTTCAATTATGAAAGGATATGTTAACGACCCAAAGGCAACTTCTGAAACTTTGACACCGGATGGGTGGCTGAGGACCGGTGACCTTTGTTATATTGATGAGGATGGCTTCCTCTTTATAGTAGATAGACTCAAGGAACTAATCAAATACAAAGGATACCAGGTTGCTCCTGCAGAATTGGAACACTTGCTTCAATCCCATCCCCAGATAGTTGATGCTGCAGTGATACCATACCCTGATGACGAAGCTGGTCAAGTGCCAATGGCGTTTATAGTCAGACGACCCGAGAGTAAACTAGACGAAGCCCAAGTGATGGACTTCATCGCAAAACAGGTTGCACCATACAAGAAAATAAGGCGTGTGTCATTTGTCACTAGCATACCCAAGAATGCATCGGGGAAAATATTGAGGAAAGAGTTGAAGAAGATCAGCCTTCCAGAATCTTTCCCCAAGTTGTGA 1698 49.53 MYLEFQNSFQDGKQPQSLTKGEKSNPAIVIYRVEQISGASPAGSTKLFRQNMGISDFAVDPRSGFCAETRTFHSLRPTVQLPPENVLLSADAYTYSLRAPSPGDDSPVIINSTTGQRLSYSEFVRRSKTLAAYLQSIVGLNKGDAAYILSNNLIQVPVLYFALLSLGVVVSPANPINTKAEVARQTQLCRPVIAFTISTAVHKIPKLRYGTIVIDSFEFELMMTSPRREMVDVKVSQSDLAGIMYSSGTTGNVKGVMVTHRNLIAMTGSYMQRKANSPVVLLQIYDLEKTIDAVEKYKVTDLAVAPPVVVAMSKKAVTEGRDLSSLETVASGGAPLGKELIEAFTAKFPGTVISQGYGMTEVIGRISEALDREECSRWGSSGKFPGIWEAKIVDQETGASLPPLKRGELWVKGPSIMKGYVNDPKATSETLTPDGWLRTGDLCYIDEDGFLFIVDRLKELIKYKGYQVAPAELEHLLQSHPQIVDAAVIPYPDDEAGQVPMAFIVRRPESKLDEAQVMDFIAKQVAPYKKIRRVSFVTSIPKNASGKILRKELKKISLPESFPKL* 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 26123303 26129912 - Vvi14g1210 Vvi14g1210 776277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1210 565 Gene3D - 70 274 IPR042099 -
Vvi14g1210 565 SUPERFAMILY Acetyl-CoA synthetase-like 104 558 - -
Vvi14g1210 565 ProSitePatterns Putative AMP-binding domain signature. 243 254 IPR020845 -
Vvi14g1210 565 Gene3D - 275 367 - -
Vvi14g1210 565 MobiDBLite consensus disorder prediction 1 21 - -
Vvi14g1210 565 CDD 4CL 82 553 - -
Vvi14g1210 565 Pfam AMP-binding enzyme 289 463 IPR000873 -
Vvi14g1210 565 Pfam AMP-binding enzyme 105 272 IPR000873 -
Vvi14g1210 565 Pfam AMP-binding enzyme C-terminal domain 472 547 IPR025110 -
Vvi14g1210 565 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 59 282 - -
Vvi14g1210 565 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 278 558 - -
Vvi14g1210 565 Gene3D Luciferase; Domain 3 385 456 - -
Vvi14g1210 565 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 278 558 - -
Vvi14g1210 565 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 59 282 - -
Vvi14g1210 565 Gene3D - 457 558 IPR045851 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g1169 Vvi14g1210 ECH
Vvi14g1210 Vvi17g149 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1210 - - vvi:100247354 994.571