Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1444 ATGTACCAAACAAAGTCAATGGTCGTCTCCAGACTGCTCTTCTCACCATTAGGCCATATCCAAGGGTGTAGCTTGGTTCTGTTAACCATAGTAATATTGTGTTGTGTTGCTCTGTTCTCAGCAGCAGTTGCCGAAGACGATGTCAAGTGTTTGCGGGGTGTGAAGGAATCTCTCAGCGACCCTCAAGGTAAGCTCAGCTCATGGTCTTTTTCAAACATTTCAGTAGGGTCTTTATGCAAATTTGTGGGGGTTGCATGCTGGAATGACCGTGAGAATCGTATATTCGGCCTCGAACTACCTGACATGAAACTATCTGGGGAGATCCCTAAACCCTTGGAGTACTGTCAGAGTATGCAAACTTTGGATCTATCAGGTAACCGTCTCTATGGTAACATCCCTTCTCAAATTTGTACATGGCTACCTTATTTAGTAACCCTGGATCTGTCTAATAATGATCTTTCCGGCACGATCCCACCCGACCTTGCAAATTGCTCTTTCTTGAATAGTCTTTTACTGGCGGATAATCAATTGTCTGGTATAATTCCGTCCCAATTATCAAGTTTGGGTCGCCTGAAGAAGTTTTCTGTGGCAAATAATCGTCTCACTGGTACAATTCCTTCAGCTTTTGGGAAATTTGATAAGGCGGGTTTTGATGGGAACAGTGGACTTTGGGGCAGAGAAAGAGGAGATATGGAATTGGAAGAGATGATCATAGCAGCTGGACTGAGAGCTACCAACAATTTCCACCCTGAGAATATCATTAACTCAACCAGGACAGGGACTAGTTACAAGGCAATTCTTCCTGATGGATCTGCACTGGCAATCAAGAGGCTCAACACCTGCAATCTGGGTGAGAAGCAGTTTCGATCCGAGATGAATCGATTAGGGCAGTTCAGGCACCCGAATTTGGCACCCCTTTTGGGATTTTGTGCTGTGGAAGAAGAGAAGCTTTTGGTTTATAAGTACATGTCTAACGGGACTCTGTATTCTCTGTTGCATGGAAATGGTACCCCAATGGATTGGGCAACTAGATTCAGGATTGGTTTGGGGGCTGCCAGAGGTCTTGCTTGGCTTCACCATGGCTGCCAACCACCACTCCTGCATGAAAACATAAGCTCGAATGTGATTCTCATTGATGATGACTTTGATGCTAGGATAGTGGATTTTGGATTGGCCAGGCTCATGGCAACTTCTGACTCCAATGGGAGTAGTTTTGTCAATGGAGGATTGGGAGAATTTGTCACTAATGCTGAAGAAGGATTCAAGGGCAATTTAGTGGAGTGGGTAAATCAGCTCTGTGGCTCTGGCCGAAACAAGGATGTAATCGATGAGGCTCTCTGCGGAAAGGGCCACGACGAAGAAATTCTGCAGTTTCTGAAAATTGCATGCAACTGTCTGGGTCCTAGGCCGAAGGACAGGTTGTCCATGTACCAGGCTTTTGAATCATTGAAGAGCATGGGAGACCACCATGGTTTCTCTGAACACTATGATGAATTTCCTCTGATTTTTGGGAAGCAAGATCATGATAATCAAGCAAATTTTGCATTTAAGCACTACCACAGAAGCAGTGGGTGTTGTGTTATTATATTTTGCTTCTGCTCTGCAAAATGTGGTGATCTTCCACTTTGGGCCCACTGGCTTCCATGTTTCAGCACGCTCACCATTCTTAATGCTGCTACTGCTGCTGTTGATGGTGCCACCATTGACTGCAACCCCTTTGTGATGATGAGTATATGA 1737 45.02 MYQTKSMVVSRLLFSPLGHIQGCSLVLLTIVILCCVALFSAAVAEDDVKCLRGVKESLSDPQGKLSSWSFSNISVGSLCKFVGVACWNDRENRIFGLELPDMKLSGEIPKPLEYCQSMQTLDLSGNRLYGNIPSQICTWLPYLVTLDLSNNDLSGTIPPDLANCSFLNSLLLADNQLSGIIPSQLSSLGRLKKFSVANNRLTGTIPSAFGKFDKAGFDGNSGLWGRERGDMELEEMIIAAGLRATNNFHPENIINSTRTGTSYKAILPDGSALAIKRLNTCNLGEKQFRSEMNRLGQFRHPNLAPLLGFCAVEEEKLLVYKYMSNGTLYSLLHGNGTPMDWATRFRIGLGAARGLAWLHHGCQPPLLHENISSNVILIDDDFDARIVDFGLARLMATSDSNGSSFVNGGLGEFVTNAEEGFKGNLVEWVNQLCGSGRNKDVIDEALCGKGHDEEILQFLKIACNCLGPRPKDRLSMYQAFESLKSMGDHHGFSEHYDEFPLIFGKQDHDNQANFAFKHYHRSSGCCVIIFCFCSAKCGDLPLWAHWLPCFSTLTILNAATAAVDGATIDCNPFVMMSI* 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 28466126 28468608 - Vvi14g1444 Vvi14g1444 776511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1444 578 SUPERFAMILY Protein kinase-like (PK-like) 237 483 IPR011009 -
Vvi14g1444 578 Pfam Protein tyrosine and serine/threonine kinase 271 399 IPR001245 GO:0004672|GO:0006468
Vvi14g1444 578 Pfam Leucine rich repeat N-terminal domain 44 87 IPR013210 -
Vvi14g1444 578 PANTHER - 416 505 - -
Vvi14g1444 578 PANTHER - 242 410 - -
Vvi14g1444 578 PANTHER - 25 228 - -
Vvi14g1444 578 PANTHER OS07G0107800 PROTEIN-RELATED 416 505 - -
Vvi14g1444 578 PANTHER OS07G0107800 PROTEIN-RELATED 242 410 - -
Vvi14g1444 578 PANTHER OS07G0107800 PROTEIN-RELATED 25 228 - -
Vvi14g1444 578 Gene3D Ribonuclease Inhibitor 44 229 IPR032675 -
Vvi14g1444 578 Pfam Leucine Rich Repeat 143 164 IPR001611 GO:0005515
Vvi14g1444 578 Gene3D Phosphorylase Kinase; domain 1 230 322 - -
Vvi14g1444 578 ProSiteProfiles Protein kinase domain profile. 248 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g1444 578 Gene3D Transferase(Phosphotransferase) domain 1 323 413 - -
Vvi14g1444 578 Gene3D Transferase(Phosphotransferase) domain 1 414 499 - -
Vvi14g1444 578 SUPERFAMILY L domain-like 44 215 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g807 Vvi14g1444 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76204 PF07714 PK_Tyr_Ser-Thr 4.60E-18 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1444 - - cpap:110820275 659.448