Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g1620 ATGGTGAAGATTTGTTGCATTGGAGCTGGGTATCAGTGTCGTGGCAAGAACCTCTTCTTCAGCACTGATGTGGAGAAACATGTATCAGAGGCTGATATTGTCTTTGTTTCTGTCAACACCCCAACCAAAACGCGGGGGCTTGGAGCAGGAAAAGCTGCGGATCTGACTTACTGGGAGAGTGCAGCCCGCATGATTGCTGATGTGTCAAAGTCTGACAAAATTGTTGTTGAGAAATCTACAGTCCCAGTTAAGACAGCTGAGGCAATAGAAAAGATTCTGACCCACAACAGCAAAGGAATCAAGGAGACCCCAGAAGGTCAGAAGGCAATCCAAGCACTGAAGGATGTTTATGCCCACTGGGTTCCCGAAGACCGAATTTTAACCACCAATCTTTGGTCTGCAGAGCTCTCCAAGCTTGCTGCTAATGCCTTCTTGGCCCAGAGGATTTCATCTGTTAATGCCATGTCAGCTCTCTGTGAGGCTACTGGGGCAGATGTTACACAGGTTTCATATGCGGTAGGCACAGACACAAGGATTGGGCCCAACATATATGATCCACAAGTCACTGAGGACCAGATCCAGAGGGACCTTACTATGAACAATATGGTTTGGGACGCCTACTCGGCAACAAAGGATGCCCACGGCATTTGCATTTTAACTGAGTGGGATGAGTTCAAAACTCTCGACTATAAGAAGATATATGATAACATGCAGAAACCAGCTTTTGTGTTTGATGGTAGGAACATTGTGAATGCAGAAAAGCTGAGGGAGATCGGTTTTATTGTGTACTCTATTGGGAAGCCGCTGGATCCATGGCTGAAGGACATGCCTGCTGTGGCATAA 843 46.74 MVKICCIGAGYQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKETPEGQKAIQALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVTQVSYAVGTDTRIGPNIYDPQVTEDQIQRDLTMNNMVWDAYSATKDAHGICILTEWDEFKTLDYKKIYDNMQKPAFVFDGRNIVNAEKLREIGFIVYSIGKPLDPWLKDMPAVA* 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 30133924 30137019 - Vvi14g1620 Vvi14g1620 776687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g1620 280 PIRSF UDPglc_GDPman_dh 181 267 IPR017476 GO:0016616
Vvi14g1620 280 PIRSF UDPglc_GDPman_dh 98 182 IPR017476 GO:0016616
Vvi14g1620 280 PIRSF UDPglc_GDPman_dh 9 105 IPR017476 GO:0016616
Vvi14g1620 280 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 183 205 IPR028356 GO:0003979
Vvi14g1620 280 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 100 182 IPR028356 GO:0003979
Vvi14g1620 280 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 12 101 IPR028356 GO:0003979
Vvi14g1620 280 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 202 280 IPR028356 GO:0003979
Vvi14g1620 280 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 183 205 - -
Vvi14g1620 280 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 202 280 - -
Vvi14g1620 280 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 100 182 - -
Vvi14g1620 280 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 12 101 - -
Vvi14g1620 280 Gene3D - 11 102 - -
Vvi14g1620 280 PIRSF UDP_ManNAc_DH 103 181 IPR028359 GO:0000271|GO:0016628
Vvi14g1620 280 PIRSF UDP_ManNAc_DH 8 105 IPR028359 GO:0000271|GO:0016628
Vvi14g1620 280 PIRSF UDP_ManNAc_DH 175 268 IPR028359 GO:0000271|GO:0016628
Vvi14g1620 280 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 181 251 IPR014027 GO:0016616|GO:0051287
Vvi14g1620 280 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 13 116 IPR001732 GO:0016616|GO:0051287
Vvi14g1620 280 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 132 188 IPR014026 GO:0016616|GO:0051287
Vvi14g1620 280 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 183 263 IPR036220 -
Vvi14g1620 280 SMART UDPG_MGDP_dh_C_a_2_a 148 252 IPR014027 GO:0016616|GO:0051287
Vvi14g1620 280 Gene3D - 131 162 - -
Vvi14g1620 280 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 136 IPR036291 -
Vvi14g1620 280 Gene3D - 182 276 - -
Vvi14g1620 280 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 132 187 IPR008927 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g1620 Vvi17g626 ECH
Vvi1g58 Vvi14g1620 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g1620 K00012 - vvi:100264653 321.242