Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g861 ATGCCTCCCAATTTCTTCCCAGCTTATTCTGTTTTCTTGATGATCATGCTGATCCCTGTTCCGAGGGTTGTGTGCGAGGACAATCAACAATTCGTCAGCTGCGGCGCACAGTATGAGTGCGGGAATATGGTTATTAGTTATCCTTTCTGGGGAGGGAGTCGCCCTCCTTACTGTGGCCATCCAGGGTTCGAGCTGACTTGTGATGGTGAAGCCCCGGAGTTTACAATGAAGGAGGCGAGTTACCGAATCCTGGATATCAATAACTCATTCCATACTCTCACCGTTGCTAGGGCGGATTACTGGGATAGTTACTGCCCTCCTACATATGTTAACACCACTCTGAATGAATCCATTTTTAGTTATAATGCCACCTATACAGACGTGACCCTCTACTATGATTGTCCCCAACTTACTATCGCGCCTTCCAACCAGTTCAATTGCACCAATATCACTGGTTACTATACAACACTGGATCTTAACCTTAGCGTAAGCCCCGGGAGTTGCGGTGTGTATGTGACGGTTCCCATTTTTCAGTCAGCAGCTACCGCTATAGTGAGCGGTGGAGGTACACTGACTCTTCTTACAGAAGCTCTTAAGGGTGGTTTCGGGTTGGAGTGGAATGCCAGTAATAGTTTGTGTACAGAATGTGTTGAATCCGGTGGGCAGTGCGGCTATACCTCCAACCAATTCACATGCTATTGTCGGAATGGGTATCCTCTCTCCAGTTGCCAAACCACAAGATCAGGCTCAAATGTGCTGAGAAAGATTATTATAGGCATTGTTGCAGGTGTGGCTACGCTCATATTAGTTCTTGCAATGCTTGGTTGCCTTAGAATAATAAAATGCCCATTGGCGTGCAAGACATTGGTCTTCTGGAAGAAGGAATCAGAGGATGATGAAAATGTGGAAGCATTTATAAGGAACTATGGATCATTGGCTCCAAAGAGATACAATTATTCAGATGTTAAGAAAATGACCAACTCATTCACAAGTAAATTAGGTGAAGGAGGATTTGGTTGCGTGTACAAAGGAAAGCTCCCTGATGGTCGCATGATGGCAGTGAAACTTTTGAGTAAGTCAAAGGGTAATGGACAAGACTTTATTAATGAAGTTGCAAGCATCAGTAGAACTTCTCATGTTAATATAGTCACTTTTATGGGATTTTGTTTTGAGAGGAGTAGAAGAGCTCTGATTTATGAATTCATGCCCAATGGATCTCTTGATAAGTTCATCTATAATAGAGGATCCTCTAATGAAAGCCTGAACTTGGAATGGAAGACCATGTACCAAATTGCAGTCGGCATTGCTCGAGGACTAGAATACTTATACCGAGGTTGCAACACAAGGATTTTGCATTTTGACATAAAACCTCACAACATTCTTCTAGACCAAAACTTCATCCCAAAAATTTCTGATTTTGGCCTTGCTAAGCTATGCCAGAAGACAGAAAGCATGGTGTCAATGACGCACGCACGGGGCACCACTGGATACATAGCTCCCGAGGTATTCTGTAGAAACTTTGGAGGAGTCTCTCATAAATCCGATGTCTACAGCTATGGAATGTTGGTTCTTGAAATGGTTGGAGGGAGAAAGAATATTGATGTGCAAGTTTTCCAACTTGGATTTATAAGCAGCTTCAGCCAGGCAAGGATCTTACAGTACTTCGTAGTATCACCAATGAAGAGGAGGAAGAAACAGCGAGGAAGATGGTTTTATTGGTTTCATCACAGGAGGAACTCCATCACATGTGAGTGA 1755 43.42 MPPNFFPAYSVFLMIMLIPVPRVVCEDNQQFVSCGAQYECGNMVISYPFWGGSRPPYCGHPGFELTCDGEAPEFTMKEASYRILDINNSFHTLTVARADYWDSYCPPTYVNTTLNESIFSYNATYTDVTLYYDCPQLTIAPSNQFNCTNITGYYTTLDLNLSVSPGSCGVYVTVPIFQSAATAIVSGGGTLTLLTEALKGGFGLEWNASNSLCTECVESGGQCGYTSNQFTCYCRNGYPLSSCQTTRSGSNVLRKIIIGIVAGVATLILVLAMLGCLRIIKCPLACKTLVFWKKESEDDENVEAFIRNYGSLAPKRYNYSDVKKMTNSFTSKLGEGGFGCVYKGKLPDGRMMAVKLLSKSKGNGQDFINEVASISRTSHVNIVTFMGFCFERSRRALIYEFMPNGSLDKFIYNRGSSNESLNLEWKTMYQIAVGIARGLEYLYRGCNTRILHFDIKPHNILLDQNFIPKISDFGLAKLCQKTESMVSMTHARGTTGYIAPEVFCRNFGGVSHKSDVYSYGMLVLEMVGGRKNIDVQVFQLGFISSFSQARILQYFVVSPMKRRKKQRGRWFYWFHHRRNSITCE* 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 20520288 20527173 + Vvi14g861 Vvi14g861 775928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g861 584 Gene3D Phosphorylase Kinase; domain 1 299 401 - -
Vvi14g861 584 PANTHER RUST RESISTANCE KINASE LR10-RELATED 17 537 IPR045874 GO:0004672
Vvi14g861 584 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Vvi14g861 584 PANTHER - 17 537 - -
Vvi14g861 584 Gene3D Transferase(Phosphotransferase) domain 1 402 567 - -
Vvi14g861 584 Pfam Wall-associated receptor kinase galacturonan-binding 39 97 IPR025287 GO:0030247
Vvi14g861 584 ProSiteProfiles Protein kinase domain profile. 327 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g861 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Vvi14g861 584 Pfam Wall-associated receptor kinase C-terminal 159 236 IPR032872 -
Vvi14g861 584 ProSitePatterns EGF-like domain signature 2. 232 243 IPR000742 -
Vvi14g861 584 Pfam Protein kinase domain 330 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g861 584 SUPERFAMILY Protein kinase-like (PK-like) 308 536 IPR011009 -
Vvi14g861 584 SMART serkin_6 327 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g344 Vvi14g861 ECH
Vvi14g861 Vvi17g290 ECH
Vvi14g861 Vvi17g289 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76232 PF00069 Pkinase 1.20E-44 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g861 - - vvi:100241191 1103.58