Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi15g496 ATGTCCATTATAATAATAGGCTTGTTTGCCTTTTATATAGTAATAGTGTGTGGACTTTTTTTTATCAGTCATGACGATACTCTCCTCAGCATTAGCATCATCATGGTGTACAGATTGTCATTGTTGCTGGTGGTTTTCATGGCCGCTGCTATTTCAATTGCTTCAGAAGACAAAGAGATTTATGTAGTTCACATGGACAAGGCCAAGACCACAGCTTTAGACAATATTCTTGGGGATTCCAAGAAATGGTATGAAGTAGTGATGGATTCCATCACAGAATTGTCAGCTGAAGAAGATGGAGTAGAAGAAGCATCAGCCCCTGAGCTCCTTTACACCTATGAAACTGCAATCACTGGCTTCGCTGCAAGGCTTTCCAATAGGCAGTTGGAAACCTTGAACAAAGTTGAGGGGTTTCTGTCAGCTGTTCCTGATGAAATGCTGAGTCTCCAAACCACCTACTCACCTCAGTTTCTTGGCCTGCAATTCGGAAAAGGACTATTGACTTCACGCAACTTGGCGAACGATGTGATAATCGGCTTTGTCGATTCTGGAATCTGGCCTGAACACGCAAGTTTCAAGGATGCGGGCATGAAACGGCCGGTGCCCTCTCGATGGAAGGGTGTTTGCGAGGAAGGCACAAGATTCACAGCTAAAAATTGCAACAGGAAGCTTATAGGCGCAAGAGCCTACTACAAGGGCTACGAGGCCGCAGCTGGGAAAATAGATGAAACGGTGGACTTCCGATCTGCTAGGGACTCCCATGGCCATGGAACTCACACTGCATCAACTGCAGCAGGCCATATGATAGATGGAGCTAGCATTTTCGGTATGGCCAAGGGCGTCGCCGCTGGAATGAGCTGTACAGGAAGAATCGCTGCATACAAAGCTTGCTATGCTCGATCCTCACAGCCTTACTATGCTGATGTCTTGGCTATTGCCTCCTTGGGGGCAGTCCAACATGGAGTTTTCGTTGCTGCCGCTGCTGGAAATTCAGGCCCATCTAGTTCAACTGTCGTCAATGCAGCACCATGGATGATGACCGTTGCTGCAAGCACCATGGATAGAAGCTTCCCTGCCATAGTTAATCTTGTGATGGCATCATTCTCCTCAAGAGGCCCTGCACTTTTAGAACCTTATAGCGACAACAGAAGTGTACTATTTAATGTAATTTCAGGAACATCCATGTCTTGTCCTCACGTTAGTGGCTTAGCTGCAATCATCAAAGGAGCACACCAAGACTGGTCACCTGCGGCCATCAAGTCAGCCCTAATGACAACCGCTTACACTCTAGACAACAAGAAAGCTCCCATCTCAGATACCGGTTCGGAGAGCCCATCAGCCACCCCATTTGCGCATGGTTCAGGCCATGTCGATCCTGAGAAAGCCTCTAACCCAGGACTGATTTATGATATCGGCTATGAGGACTATCTCTACTATCTGTGTAGTCTCAAGTATTCATCTTCTGAGATGGCTACACTATCAAGGGGGAACTTCAGTTGCCCCACAGACACAGATCTTCAAACGGGTGACTTGAACTACCCTTCATTTGCTGTACTTTTCGATGGAGATTCCCACAACAACAGCGCCACATACAAAAGAACCGTAACAAATATTGGGTACCCTACTACTACTTATGTGGCGCAGGCCCATGAGCCTGAAGGAGTATCAGTCATCGTTGAGCCTAAGGTTTTAAAGTTCAACCAGAAGGGCCAGAAACTGAGCTACAAGGTAAGTTTTGTTGATTCGGGAGAGAAATCAAGTTCATCAGATTCATCTTTTGGATCTCTTGTTTGGGTGTCCAGCAGATATTCAGTTAGAAGTCCTATTGCAGTGACTTGGCAGTAG 1845 46.45 MSIIIIGLFAFYIVIVCGLFFISHDDTLLSISIIMVYRLSLLLVVFMAAAISIASEDKEIYVVHMDKAKTTALDNILGDSKKWYEVVMDSITELSAEEDGVEEASAPELLYTYETAITGFAARLSNRQLETLNKVEGFLSAVPDEMLSLQTTYSPQFLGLQFGKGLLTSRNLANDVIIGFVDSGIWPEHASFKDAGMKRPVPSRWKGVCEEGTRFTAKNCNRKLIGARAYYKGYEAAAGKIDETVDFRSARDSHGHGTHTASTAAGHMIDGASIFGMAKGVAAGMSCTGRIAAYKACYARSSQPYYADVLAIASLGAVQHGVFVAAAAGNSGPSSSTVVNAAPWMMTVAASTMDRSFPAIVNLVMASFSSRGPALLEPYSDNRSVLFNVISGTSMSCPHVSGLAAIIKGAHQDWSPAAIKSALMTTAYTLDNKKAPISDTGSESPSATPFAHGSGHVDPEKASNPGLIYDIGYEDYLYYLCSLKYSSSEMATLSRGNFSCPTDTDLQTGDLNYPSFAVLFDGDSHNNSATYKRTVTNIGYPTTTYVAQAHEPEGVSVIVEPKVLKFNQKGQKLSYKVSFVDSGEKSSSSDSSFGSLVWVSSRYSVRSPIAVTWQ* 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15309082 15326318 - Vvi15g496 Vvi15g496 777188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi15g496 614 Gene3D Peptidase S8/S53 domain 302 353 IPR036852 GO:0004252|GO:0006508
Vvi15g496 614 Gene3D Peptidase S8/S53 domain 380 476 IPR036852 GO:0004252|GO:0006508
Vvi15g496 614 Gene3D Peptidase S8/S53 domain 175 300 IPR036852 GO:0004252|GO:0006508
Vvi15g496 614 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 47 150 IPR037045 -
Vvi15g496 614 Gene3D - 354 363 - -
Vvi15g496 614 PRINTS Subtilisin serine protease family (S8) signature 173 192 IPR015500 -
Vvi15g496 614 PRINTS Subtilisin serine protease family (S8) signature 252 265 IPR015500 -
Vvi15g496 614 PRINTS Subtilisin serine protease family (S8) signature 391 407 IPR015500 -
Vvi15g496 614 MobiDBLite consensus disorder prediction 436 458 - -
Vvi15g496 614 SUPERFAMILY Subtilisin-like 149 467 IPR036852 GO:0004252|GO:0006508
Vvi15g496 614 Gene3D - 480 613 - -
Vvi15g496 614 ProSitePatterns Serine proteases, subtilase family, serine active site. 392 402 IPR023828 -
Vvi15g496 614 ProSiteProfiles Serine proteases, subtilase domain profile. 136 463 - -
Vvi15g496 614 Pfam Fibronectin type-III domain 510 611 IPR041469 -
Vvi15g496 614 Pfam Peptidase inhibitor I9 61 149 IPR010259 -
Vvi15g496 614 Pfam Subtilase family 174 432 IPR000209 GO:0006508|GO:0008236
Vvi15g496 614 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 51 300 IPR045051 -
Vvi15g496 614 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 379 614 IPR045051 -
Vvi15g496 614 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 301 364 IPR045051 -
Vvi15g496 614 CDD Peptidases_S8_3 149 428 IPR034197 -
Vvi15g496 614 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 301 364 - -
Vvi15g496 614 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 379 614 - -
Vvi15g496 614 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 51 300 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g434 Vvi15g496 ECH
Vvi15g496 Vvi16g533 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi15g496 - - cic:CICLE_v10018512mg 626.706