Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1062 ATGGGAAATGAGAAACTTGCTGAGATCGCATTAGTAGACCCCAAGCGTGCCAAAAGAATTCTGGCTAATCGTCAGTCAGCTGCTCGTTCCAAGGAGAGGAAGGTGCGATACATGGCAGAATTGGAACACAAGGTGCACACTCTACAAACAGAGACAACTACGTTATCTCACCTGCTTACTCTCCTACAGAGAGATTCTGCCGAGCTCACTAGTCGGAACAATGAATTGAAACTCCGAATTCAGGCCATGGAACAAGAGGCACAGTTCAGGGATGCTTTGAAGGAGGCATTAACCCTGGAAGTCCATCGTCTACAGCTTCTCGGAACTGCAGAGCCTAGTGGTGGGAAGGTGTTCTTCTCTTCCCTTTGTTTTGTCAGAGACTCTGGACCCAATTAA 396 47.73 MGNEKLAEIALVDPKRAKRILANRQSAARSKERKVRYMAELEHKVHTLQTETTTLSHLLTLLQRDSAELTSRNNELKLRIQAMEQEAQFRDALKEALTLEVHRLQLLGTAEPSGGKVFFSSLCFVRDSGPN* 132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 11745490 11746340 - Vvi18g1062 Vvi18g1062 780765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1062 131 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 112 - -
Vvi18g1062 131 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 13 76 IPR004827 GO:0003700|GO:0006355
Vvi18g1062 131 SMART brlzneu 11 75 IPR004827 GO:0003700|GO:0006355
Vvi18g1062 131 CDD bZIP_plant_RF2 16 49 IPR044759 GO:0003700|GO:0006355
Vvi18g1062 131 Pfam bZIP transcription factor 15 73 IPR004827 GO:0003700|GO:0006355
Vvi18g1062 131 Gene3D - 15 66 - -
Vvi18g1062 131 Coils Coil 59 86 - -
Vvi18g1062 131 SUPERFAMILY Leucine zipper domain 15 66 IPR046347 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g57 Vvi18g1062 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
14265 PF00170 bZIP_1 5.40E-10 CL0018 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1062 - - vvi:100264275 235.343