Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g672 ATGGAGTTGAAGCTCCTACTCCTACAAAACACAAAAATGTGTTGTGAACCTCCAAGAATTAGAGAAAATATTTCATTATATATAAAGAATGTTACGGAGGAGAAATTGATACATCTATTGGCAATCAGCAGTGAAGATAGAAAACAAACCAGCTTAGCTAGTAGCCAAGAAAGCCAATCATTCTGGTATGTGAGGTTCTTATTCATTCCCTACAGCTTTAAAACAGAAATATCACCCAAAGAGGCCCATTCAATTCCCTTCTCTTCATCCCCAGTTTGCAGAGACACACGGAATATGAAGACATGGAGGTTATCAATAGTTGTACTCGTGAGTTTCCATTTCGCACTTGTTGTAGCAGAAGAGATCAAGCACCAACAAAAGAACACTTACATCGTTCACATGGACAAGTCTAACATGCCAACAACTTTCGATGATCACTTCCAATGGTACGACTCTTCTCTAAAGACGGCATCAAGCTCGGCTGATATGCTTTACACCTACAACAATGTAGTCCACGGTTTCTCCACCAGGTTGACGACGGAGGAAGCTGACGAGGTGATTGTGGGAGTATTAGACACGGGTGTCTGGCCTGAGCTAAAAAGCTTTGACGACACTGGGCTGGGTCCCGTCCCAAGTAGCTGGAAAGGCGAATGTGAGACAGGCAAGACCTTCCCGTTATCAAGCTGCAATCGAAAACTAATTGGGGCAAGGTTTTTCTCAAGAGGGTATGAAGTCGCATTTGGACCAGTTAACGAAACAATAGAGTCAAGATCACCAAGGGATGATGACGGCCATGGAAGTCACACCTCAACTACTGCAGTTGGATCAGCAGTTGAAGGAGCTAGCCTCTTCGGTTTCGCTGCTGGCACAGCCCGTGGAATGGCAACACATGCCAGAGTTGCTGCATACAAGGTTTGCTGGCTTGGTGGATGTTATGGCTCTGACATTACAGTGTTGCCATTGGGGCTTTCAGGGCTATGGAACAAGGAATCCTCGTATCTTGCTCAGCTGGAAATGGTTGACACCAGGAAGGTGAGCTTCAACATCATTTCAGGTACATCCATGTCCTGCCCCCATGTAAGTGGGCTAGCAGCACTACTCAAGGCTGCTCACCCAGAATGGAGACCTGCAGCAATTAAGTCTGCCCTCATGACCACAGCTTACCACACATACAAGGGTGGTGAAACAATACAGGATGTTGCAACTGGAAGGCCAGCAACTCCATTTGATTATGGTGCTGGACATGTAAATCCAGTATCAGCTCTGGACCCCGGCCTTGTCTATGATGCTACTGTTGATGACTATCTAAGTTTCTTTTGTGCCTTAAACTACAAGCAAGATGAGATCAAGCGGTTCACAAACAGAGACTTCACCTGTGATATGAACAAGAAATACAGTGTGGAAGATCTTAATTACCCATCCTTTGCAGTTCCTCTGCAGACGGCCTCAGGCAAAGGAGGTGGTAGTGAAAGTGTCAAATTTCTAATTTAA 1491 45.2 MELKLLLLQNTKMCCEPPRIRENISLYIKNVTEEKLIHLLAISSEDRKQTSLASSQESQSFWYVRFLFIPYSFKTEISPKEAHSIPFSSSPVCRDTRNMKTWRLSIVVLVSFHFALVVAEEIKHQQKNTYIVHMDKSNMPTTFDDHFQWYDSSLKTASSSADMLYTYNNVVHGFSTRLTTEEADEVIVGVLDTGVWPELKSFDDTGLGPVPSSWKGECETGKTFPLSSCNRKLIGARFFSRGYEVAFGPVNETIESRSPRDDDGHGSHTSTTAVGSAVEGASLFGFAAGTARGMATHARVAAYKVCWLGGCYGSDITVLPLGLSGLWNKESSYLAQLEMVDTRKVSFNIISGTSMSCPHVSGLAALLKAAHPEWRPAAIKSALMTTAYHTYKGGETIQDVATGRPATPFDYGAGHVNPVSALDPGLVYDATVDDYLSFFCALNYKQDEIKRFTNRDFTCDMNKKYSVEDLNYPSFAVPLQTASGKGGGSESVKFLI* 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7846236 7853155 + Vvi18g672 Vvi18g672 780375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g672 496 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 115 187 IPR037045 -
Vvi18g672 496 PRINTS Subtilisin serine protease family (S8) signature 183 202 IPR015500 -
Vvi18g672 496 PRINTS Subtilisin serine protease family (S8) signature 351 367 IPR015500 -
Vvi18g672 496 Pfam Peptidase inhibitor I9 129 186 IPR010259 -
Vvi18g672 496 Gene3D Peptidase S8/S53 domain 188 316 IPR036852 GO:0004252|GO:0006508
Vvi18g672 496 Gene3D Peptidase S8/S53 domain 341 435 IPR036852 GO:0004252|GO:0006508
Vvi18g672 496 CDD Peptidases_S8_3 186 388 IPR034197 -
Vvi18g672 496 Gene3D - 439 494 - -
Vvi18g672 496 ProSitePatterns Serine proteases, subtilase family, serine active site. 352 362 IPR023828 -
Vvi18g672 496 SUPERFAMILY Subtilisin-like 180 428 IPR036852 GO:0004252|GO:0006508
Vvi18g672 496 Pfam Subtilase family 185 315 IPR000209 GO:0006508|GO:0008236
Vvi18g672 496 Pfam Subtilase family 341 414 IPR000209 GO:0006508|GO:0008236
Vvi18g672 496 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 118 184 - -
Vvi18g672 496 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 340 488 - -
Vvi18g672 496 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 184 317 - -
Vvi18g672 496 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 184 317 IPR045051 -
Vvi18g672 496 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 340 488 IPR045051 -
Vvi18g672 496 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 118 184 IPR045051 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g963 Vvi18g672 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g672 - - rcu:8288514 333.183