Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g698 ATGTCAGCCAGTCTTTATCTTTATAGCTTTCCCCCAATTCTCCCCATGTGGATCTTAATAGGGGAATTGAAAACTAGAGTATTGAAAGTGGAAATCAAGTCGGCCTTTAATATATTAGCTTTTAATATCATAATGAAGATGCTTACAGGAAACAGGTATTTCGAAGATGATGACCTGAACTCAGATGAAACTAGGCATAGATTGGATGACATTAAGCAGACCTTCAGTCCCTCCAGGCAGGTGGGTCTGGGAGGCTTTCCATTCCTGAGGTGGTCAATAATCATAGATACTATGTTATCTCTGCAAGAATTGGAACCTGAATTCTACACTGACGATATCATCAAGGGAATGATAATGTATCACATCCTGATCCATTGTGTTATGAATGAAACACTAAGATTAGGTCCTGTGGGGCAATTCATACCTCCCCGGGACGCATCAGATGATTGTGTAATAGAGGTTTCGACATCCCACGAGGAACGATGTTGTTGGTGGATTCTTGGGCCTTGCACAAGGACCCCCAGCTGTGGGAAGATCCCACAATGTTCGAGCCAGAAAGATTTGAAGGGCCCCAATCTGAGAAGGGCGGGAGAAAAATACATGATCATGAAGGAAACCTGGTTCCGTTTCCTTTCTGTTTCCTCCTCTCTCTTTCTCATTGTCCTCTCAAAGCTGTTTTACCATAAGCAATCACGAGGAAGAAAGCTCCCACCCAGCCCGCCTTCATTTCCCATCATAGGACACCTCCATCTTTTGAAAGAACCAGTCCACCGATCCTTGCAACATCTTTCAGACCAGTATGGTCCAGTTCTTACCCTCCAATTTGGATTCCGAACTGTGCTTCTTCTATCATCCCCATCTGCGGTTGAAGAATGCTTCACTAAGCATGATCAGGTCTTTGCAAATAGGCCACGCCTTCTTGCTGGGAAGCACCTCCACTATGACTATACCACGCTGGGGGTAGCCCCTTATGGCCAGCACTGGCGCAATCTTCGCCGCCTTACCACACTTGAAATCTTCTCTACGAACCGCCTCAACATGTTTCTAGGTATTCGACAGGATGAAGTCAAATTCTTACTTAGAAATCTATTTCAGAGATCGGGCCAAGGTTTTGCAAGAGAGGCCAGCCGCTTTAGAGATATTATAAAGGAGATTTTGGAAACGTCCGGGGCATCAAATGCTGGGGATTTCTTGCCATTTTTACAATGGCAGGAACGAGGAAAGACTAAAACCTTCGTTGACTCTATGCTGGCTTTACAGAACTCAGAACCTGAATACTACGCCGATCACATTATCAAAGGCATGATATTGACATTGCTGACTGCGGGCACAGACACCTCCGCAGTGACGATGGAGTGGGCTATGTCACTTCTGCTCAACCATCCTACGGTGTTAGACAAAGTTAAAACGGAGTTGGACTGTAAAATTGGTCATCAACGTCTAGTTGAGGAACCAGACCTCTCCGACCTGCCCTACCTCCGAGCTATCGTGAACGAGACCCTTCGGTTGTTCCCTGCAGCACCACTCCTTGTTGCACATGAATCTTCAGATGACTGTAGCATTGGAGGGTATGATGTACGAGGTGGTACGATGTTGTTGGTGAATGCATGGGCCATTCACAGGGATGCTAAGGTATGGGAGGACCCCACAACATTGGTGCAGTGCTTTGAGTGGCAGAGGGTGGGCGAAGTGGAAGTGGACATGTCTGAAGGGAAAGGGCTCACTATGCCTAAGGCTCAACCATTAGAGGCTATGTGCAGAGCACGAAACTCCATGATTAAGGTCCTTTCAGAGCTGTGA 1800 46.44 MSASLYLYSFPPILPMWILIGELKTRVLKVEIKSAFNILAFNIIMKMLTGNRYFEDDDLNSDETRHRLDDIKQTFSPSRQVGLGGFPFLRWSIIIDTMLSLQELEPEFYTDDIIKGMIMYHILIHCVMNETLRLGPVGQFIPPRDASDDCVIEVSTSHEERCCWWILGPCTRTPSCGKIPQCSSQKDLKGPNLRRAGEKYMIMKETWFRFLSVSSSLFLIVLSKLFYHKQSRGRKLPPSPPSFPIIGHLHLLKEPVHRSLQHLSDQYGPVLTLQFGFRTVLLLSSPSAVEECFTKHDQVFANRPRLLAGKHLHYDYTTLGVAPYGQHWRNLRRLTTLEIFSTNRLNMFLGIRQDEVKFLLRNLFQRSGQGFAREASRFRDIIKEILETSGASNAGDFLPFLQWQERGKTKTFVDSMLALQNSEPEYYADHIIKGMILTLLTAGTDTSAVTMEWAMSLLLNHPTVLDKVKTELDCKIGHQRLVEEPDLSDLPYLRAIVNETLRLFPAAPLLVAHESSDDCSIGGYDVRGGTMLLVNAWAIHRDAKVWEDPTTLVQCFEWQRVGEVEVDMSEGKGLTMPKAQPLEAMCRARNSMIKVLSEL* 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8050119 8054991 + Vvi18g698 Vvi18g698 780401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g698 599 Gene3D Cytochrome P450 222 594 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 PRINTS P450 superfamily signature 442 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 PRINTS P450 superfamily signature 495 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 PANTHER CYTOCHROME P450 82C3-RELATED 373 404 - -
Vvi18g698 599 PANTHER CYTOCHROME P450 82C3-RELATED 27 91 - -
Vvi18g698 599 PANTHER CYTOCHROME P450 82C3-RELATED 406 551 - -
Vvi18g698 599 PANTHER CYTOCHROME P450 82C3-RELATED 551 598 - -
Vvi18g698 599 PANTHER CYTOCHROME P450 82C3-RELATED 229 373 - -
Vvi18g698 599 SUPERFAMILY Cytochrome P450 237 589 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 SUPERFAMILY Cytochrome P450 29 152 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 Pfam Cytochrome P450 363 550 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 Pfam Cytochrome P450 237 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 PRINTS E-class P450 group I signature 264 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 PRINTS E-class P450 group I signature 288 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 PRINTS E-class P450 group I signature 494 512 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 PRINTS E-class P450 group I signature 535 559 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g698 599 PANTHER - 229 373 - -
Vvi18g698 599 PANTHER - 551 598 - -
Vvi18g698 599 PANTHER - 406 551 - -
Vvi18g698 599 PANTHER - 373 404 - -
Vvi18g698 599 PANTHER - 27 91 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g992 Vvi18g698 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g698 - K13260 vvi:100260801 742.651