Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g858 ATGGAGTTCCATCTTCCATTTTCAATTACCACGGCCAGCATGTTTATCTTTCTACTCTCTTTCTATTATTTGTTAAAGATGCTAAGGCGTTCTGAGAGGAAAAGAACTGCCCCGGAAGCCGCCGGGGCATGGCCTGTGATTGGTCACCTCCATCTGTTAGGAGGCTCTGAGCTGCCCCACAAAACCTTGGGGGCTATGGCCGACAAGTACGGGCCGATCTTCTTTATCAAGCTTGGTGCGCGACCAGTATTGGTGGTGAGTAATTGGGAGATTGCTAAGGAGTGCTTTACTACCAACGACAAAGCTTTCGCCAATCGTCCCAAATTAATAGCGGTGGAGGTTATGGGCTACAACAACGCCATGTTCGGCTTTAGCCCATATGGCTCCTACTGGCGCCAGATGCGCAAGATAGTCACTACACATCTTCTCTCAAACAGAAGCCTGGAGATGCTGAAACTGGTACGTATATCGGAGGTGAAGGCAACGATAAAAGAGCTACATGAGTTATGGGTCTCTAAGAAAAGTGATTCAAACATGGTATCAGTGGAGATGAGGCGATGGTTTGGAGATCTAGCCCTAAATTTGGCTGTAAGGATGACTGCCGGGAAGAGATTTTCTAGTGACAAGGAAGGAGTGGAGTACCACAAAGCAATAAGATGTTTTTTTGAGTTGACGGGGAAGTTTATGGTGTCGGATGCTCTCCCTTTTCTAAGGTGGTTTGACTTGGGAGGCTATGAGAAGGCCATGAAGAAGACTGCAAAAAGTCTAGACCATCTACTTGAAGACTGGTTACAGGAACATAAAAGAAAGAGAGTTTCTGGGCAGCCCACTGGGGACCAAGATTTTATGGATGTGATGCTGTCCATTTTAGATGATGAGACCAGGGCCCAAGATATAAAGAGTTCCGATGCCGATATCATTAACAAAGCTACATGCCTGAATGTCTTAATAGCGACCACCGATACTGTTACAGTTAGCCTAACATGGGCTCTGTCGTTACTGTTAAACAACCGACACGTATTGAACAAAGCCAAAGAGGAGCTAGATTTGCATGTGGGAAGGGAAAGGCGAGTCGAGGAACGGGACATGAGCAACCTGGTCTACCTCGATGCTATCATCAAGGAAACTCTGCGTTTATATTCAGCTGTTCAAGTTCTAGCTGCACATGAGTCCACGGAGGAATGCGTTGTAGGTGGCTGCTACATACCCGCTGGGACGCGCCTGATAATTAATCTTTGGAAGATTCACCACGATCCAAGTGTATGGTCGGATCCTGATCAGTTCATGCCTGAGAGATTTCTCACTACGCATAAGGATGTTGATGTTAGAGGTATGCATTTTGAATTGATTCCATTTGGAAGTGGAAGAAGAATTTGCCCTGGAGTGTCCTTAGCTCTACAATTTCTGCAATTCACCCTAGCCAGCTTAATTCAAGGATTTGAGTTTGCAACGGCATCCGATGGACCGGTTGATATGACTGAAAGCATTGGGTTAACCAACCTCAAGGCCACCCCGCTTGACGTTCTCCTCACTCCTCGCCTCTCTTCTAATCTCTATGAGAACATGGCTCAAAGAAAACCTACGAAAGCTAGAACCTTTCAATATGGAACCATATGTCTAAACGAAGTGTTGAATCCAAACCTAAGGTTTAACTCTTTATTTTCTCAAAACCTTTTTGAAGAACATAAGGTTATTGTAGATAATTTTTGGTCTTTAAAACCACAAAGTTTTCCGAACCAAAATTTAGAATACGCTTATGGAAAAACAGTGTCAGCTTTAGCCCAACATTTACAAAACCTTCAAAACCAACTGATTGCTTTAGAAACCCAAAAATTCCAAAACCTCAAAATCCAAGAAAATCAAGAAAAACTGATAGAAGATTTGAAAACCAGTACAGTGTCAACCAATCAAACCAGCTGTTTAAACAGTCAACCTGAAGTAATTAGTTTAATTAAGAAATCAGCTCTTCTGACTGAACAATATGAAAGGCTTGTTGTTAAAAACATAATTGGAGTTGATAACTACTCTTTCGTCAAAACCTTTTTTCTACAAAACCAATATAACAAAGTGTTTAAAAATCAAGAACTTTTGTATAAACATTTTAGAACTAAAAATGTCGGGATAAAAACAGGGTATATGGCATATCACGACCCTGAATTTTTCTTTGTTATATATTTAGCTTATGTAAATATGTCTGTTGTAAATAAAGAAAATTTTGATTTGGTACCGCAACTTATGGATCAGGGAATTTTAAAAAATGTTTTTATGAACCATATATCTCAAATCCCTGAAAATTTCCCAGAAAAATTGAAAGATATTTTAACTTATCTTTTTAAAGCCGAAAAATATATAGATATTTCTTTTGAAACCATTCCACCTTTATTTCAACCCGATGGATCAGTAGTACCAGCCTATCATCATGTATATATAAAACATAATAAAGAACCACTCATCCCTCAACAAGAACCAGAATGGGAAATGACCCGTTCAAATGAATTTCCAGAATTTTTTACTCGCTTTAGAGCTTTTCAAATCTATGATCTTATACCAACCCGGAATAAATTATTTCATCTCATTGGCGAAACAAAAACCATGTCTATATGGAGAATAAAACCTTTAGAACACATCATTGTTCCAAACCCTTTTATTACTTCTGAAGAACAGGATTTTATAACCGAACTCAGTGTAGATATACCGGAACCATCTTCCTACCTCAGCGATGACGCATTATTTTGGGACAACCTGGACGATGAAAGTTATCATAATCTACAAAATGCAATGGAAGGATGA 2790 39.96 MEFHLPFSITTASMFIFLLSFYYLLKMLRRSERKRTAPEAAGAWPVIGHLHLLGGSELPHKTLGAMADKYGPIFFIKLGARPVLVVSNWEIAKECFTTNDKAFANRPKLIAVEVMGYNNAMFGFSPYGSYWRQMRKIVTTHLLSNRSLEMLKLVRISEVKATIKELHELWVSKKSDSNMVSVEMRRWFGDLALNLAVRMTAGKRFSSDKEGVEYHKAIRCFFELTGKFMVSDALPFLRWFDLGGYEKAMKKTAKSLDHLLEDWLQEHKRKRVSGQPTGDQDFMDVMLSILDDETRAQDIKSSDADIINKATCLNVLIATTDTVTVSLTWALSLLLNNRHVLNKAKEELDLHVGRERRVEERDMSNLVYLDAIIKETLRLYSAVQVLAAHESTEECVVGGCYIPAGTRLIINLWKIHHDPSVWSDPDQFMPERFLTTHKDVDVRGMHFELIPFGSGRRICPGVSLALQFLQFTLASLIQGFEFATASDGPVDMTESIGLTNLKATPLDVLLTPRLSSNLYENMAQRKPTKARTFQYGTICLNEVLNPNLRFNSLFSQNLFEEHKVIVDNFWSLKPQSFPNQNLEYAYGKTVSALAQHLQNLQNQLIALETQKFQNLKIQENQEKLIEDLKTSTVSTNQTSCLNSQPEVISLIKKSALLTEQYERLVVKNIIGVDNYSFVKTFFLQNQYNKVFKNQELLYKHFRTKNVGIKTGYMAYHDPEFFFVIYLAYVNMSVVNKENFDLVPQLMDQGILKNVFMNHISQIPENFPEKLKDILTYLFKAEKYIDISFETIPPLFQPDGSVVPAYHHVYIKHNKEPLIPQQEPEWEMTRSNEFPEFFTRFRAFQIYDLIPTRNKLFHLIGETKTMSIWRIKPLEHIIVPNPFITSEEQDFITELSVDIPEPSSYLSDDALFWDNLDDESYHNLQNAMEG* 930
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9846631 9858576 + Vvi18g858 Vvi18g858 780561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g858 929 Gene3D Cytochrome P450 23 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 SUPERFAMILY Cytochrome P450 43 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 Coils Coil 590 610 - -
Vvi18g858 929 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vvi18g858 929 Pfam Cytochrome P450 42 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g858 929 PANTHER CYTOCHROME P450 82C3-RELATED 34 520 - -
Vvi18g858 929 PANTHER CYTOCHROME P450 34 520 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g513 Vvi18g858 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g858 - K23136 vvi:100248962 1043.49