Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g104 ATGGTAAATATTGCACGTCGTCGGAGACTGCTTCAGTCATCTTATAATCTCCCTGCTGCACCTGTGAGTAGCACTGAGCTCTCGCAACTAACAACACCTTTTACTCTAAGCAGTGGAGCTTTCCCTGCAGTTAACAAACACTCTCCTCTACCATCAAACCCGTCTCTTCCTTCACCGCCTGACCTGTCTCTTAGTGCTCCTAATCCTAATACCAAGTCTCCCCAAAAGCCAGTTCACCAACCTTCAGCTCATCATTCTCCTGAAAGGAACTATTTTCACGCAATTCCTGGAGTGGTCTTTTTGTTTGTTCTTTGTGCAGTAATGCTCTACATTTGTCGGAAAAAAGCAGCAAAAGCAATAGCTCCTTGGAAGACTGGTATAAGTGGCCAGTTGCAGAAGGCACTTGTCACAGGTGTTTCCAAGCTGAACAGGGCAGAGCTAGAAGCTGCTTGTGAGGATTTCAGCAATATTCTTGATACTTTTCCTGGCTGTAAAGTATACAAGGGGACGCTTTCAAGTGGTGTTGAGATTGCTGTGGCCTCAACTACTATTGCATCTTTCAAAGAATGGTCAAGACATGCAGAAGTGGCATTTAAGAAAAGGATAGAGAAACTATCAAGAATAAACCACAGGAACTTCGTAAATATACTAGGCTACTGTCAAGAGGACGAGCCTTTCACGAGGATGATGGTGTTTGAGTATGCCCCCAATGGAAACCTCTATGAGCATCTACATGTAAAAGAAGTTGAACATCTTGACTGGAATGCTAGGGTGAGAATTATAATGGGAGTGGCCTATTGTCTTGAACACATGCACCATGTGCTGAACCCTCCTTTAGTTCATCCCCATCTGCATTCAAGTTCTATTCTTTTGACAGAAGATTGTGCTGCAAAGATTGCAGAAATAAGTTTCTGGATGGATCTGGCAACCAAATCAAAGATAGCAGATGAAGAACAATCAGAGCATTCCCTGTTGCACCCAGAAGCTGACCCTGAATCAAATGTCTACAGCTTTGGAATAATGCTGCTAGAGATCATTTCTGGGAAGGTCCCTTACAATGAAGAACAAGGATCCCTTGTGAACTGGGCTACTGAATACTTAAATGGTCAGAAGAGGATCAGCTACATGATAGATCCCTCACTCAAGTCTTTCAAGAATACTGAGCTTGATGTTATATGTGAGATAATCCAGGAATGCATAAATGAAGAACCAAAGCATAGGCCAACAATGAAAGACATAGTCTCAAGCCTAAGGAATGTGATTGCAGTCTCCCCAGATCAAGCAACTCCAAAACTCTCTCCCCTATGGTGGGCAGAACTTCAAATCCTTTCAGTTGAGGCCAGTTAA 1347 43.13 MVNIARRRRLLQSSYNLPAAPVSSTELSQLTTPFTLSSGAFPAVNKHSPLPSNPSLPSPPDLSLSAPNPNTKSPQKPVHQPSAHHSPERNYFHAIPGVVFLFVLCAVMLYICRKKAAKAIAPWKTGISGQLQKALVTGVSKLNRAELEAACEDFSNILDTFPGCKVYKGTLSSGVEIAVASTTIASFKEWSRHAEVAFKKRIEKLSRINHRNFVNILGYCQEDEPFTRMMVFEYAPNGNLYEHLHVKEVEHLDWNARVRIIMGVAYCLEHMHHVLNPPLVHPHLHSSSILLTEDCAAKIAEISFWMDLATKSKIADEEQSEHSLLHPEADPESNVYSFGIMLLEIISGKVPYNEEQGSLVNWATEYLNGQKRISYMIDPSLKSFKNTELDVICEIIQECINEEPKHRPTMKDIVSSLRNVIAVSPDQATPKLSPLWWAELQILSVEAS* 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1346881 1349339 - Vvi19g104 Vvi19g104 781603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g104 448 MobiDBLite consensus disorder prediction 47 86 - -
Vvi19g104 448 ProSiteProfiles Protein kinase domain profile. 152 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi19g104 448 SUPERFAMILY Protein kinase-like (PK-like) 164 417 IPR011009 -
Vvi19g104 448 MobiDBLite consensus disorder prediction 65 80 - -
Vvi19g104 448 Gene3D Transferase(Phosphotransferase) domain 1 235 429 - -
Vvi19g104 448 PANTHER PROTEIN MALE DISCOVERER 2 4 447 - -
Vvi19g104 448 PANTHER PROTEIN MALE DISCOVERER 2 4 447 - -
Vvi19g104 448 Gene3D Phosphorylase Kinase; domain 1 123 234 - -
Vvi19g104 448 Pfam Protein tyrosine and serine/threonine kinase 165 417 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi10g226 Vvi19g104 ECH
Vvi12g153 Vvi19g104 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76410 PF07714 PK_Tyr_Ser-Thr 1.20E-27 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g104 - - vvi:100854079 837.025