Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g617 ATGCTCCTTCAGCTCGGTGTCCCTACCGTCGTAGTCTCCTCTGCGGAAGCTGCAAGGGAATTCTTGAAAACTCATGATATTGATTGTTGCAGTCGACCTCCCTTAGGAGGTACGCAAGATCTGCTTGAGAGGAGTTTCCATGAAATGGACGGCTTCTACCAACAGGTGATCGAAGACCATCTCAACCCAGGAAGGGTGAAAGAGGAGCATGAAGACATCATCGACGTGCTGCTGAGAATAGAGAGGGAACAATCTGAATCCAGTGCCCTACAGTTTACTAAAGATAACGCGAAAGCAATCGTTATGGATTTATTCTTGGCTGGAGTGGACACTGGTGCAATCACCGTATCTTGGGCAATGACCGAGCTTGCTAGGAACCCAAGAATAATGAAAAAAGCCCAGGCTGAAGTTAGAAACTCCATTGGAAATAAAGGAAAAGTCACGGAGGGTGATGTCGATCAGCTTCACTACCTCAAGATGGTGGTCAAAGAAACTTTGAGACTGCATCCTCCCGCCCCACTTCTACTTCCAAGAGAAACCATCAAACACCATCTCATTTCTGTTTATAATTTAGAGATGAAGGCCAACATCTACCTGCCTACCTTGCAATTGATGCTCACAAGTGCTCGCTTACTACTTTTTGCCAGTGTAGTGAATAAATTATGTCCACATAAATTAGCTATAGTAGGGGCCAAGAAAAGTGCATCCTATGAGCCTTATGGTAGCAGCCAAGAGAAAACTGCAACCCTGTATAGCCTATTAATAATTTTTAACTTCTTCTACTGGCAGTTTTATATAAGTGGCTACAGCCATAGGATTTGTCTGCACCCTCTATGGTCTATGACTAAGCTTTGCTCTATTTTATCCCTATCTAAATTTTATATGGGGCAAAAGAAGCCGCTGCCGCCTGGCCCTACTAAGCTTCCCATTATAGGTAATTTGCACCAACTTGGTACGTTGCCTCACTACTCTTGGTGGCAACTATCTAAGAAATATGGCCCCATCATACTCCTTCAGCTCGGTGTCCCTACCGTCGTAGTCTCCTCTGCGGAAGCTGCAAGGGAATTCTTGAAAACTCATGATATTGATTGTTGCAGTCGACCTCCCTTAGTTGGACTTGGAAAATTCTCATACAATCACCAAGACATAGGTTTTGCGCCATACGGCGATTACTGGAGGGAGGTACGCAAGATCTGTGTTCATGAGGTGTTTAGCACAAAAAGGCTGCAGTCGTTTCAGTTCATCAGAGAAGAGGAGGTCGCTTTGCTGATTGATTCAATTGCGGAATCATCTTCTTCTGGAAGTCCTATTGATCTTACCGAGAGGTTAATGTCTCTCACTGCAAATATAATTTGCAGGATTGCATTCGGAAAGAGTTTTCAAGTGAGTGAGTTTGGTGACGGAAGATTTCAAGAAGTGGTTCGTGAAGCCATGGCTTTGTTGGGCGGGTTCACTGCAGCCGATTTCTTTCCGTACGTGGGTCGGATTGTGGATAGACTCACTGGTCTTCATGGAAGGCTTGAGAGGAGTTTCCTTGAAATGGACGGTTTCTACCAACGGGTGATTGAGGACCATCTCAACCCAGGAAGGGTGAAAGAGGAGCATGAAGACATTATCGACGTGCTGCTGAAAATACAGAGGGAACGGTCTGAATCCGGTGCTGTACAGTTTACTAAAGATAGTGCAAAAGCAATCCTCATGGATTTATTCTTGGCTGGAGTGGACACTGGTGCAATCACCCTAACTTGGGCAATGACCGAGCTTGCTAGGAACCCAAGAATAATGAAAAAAGCCCAGGTTGAAGTTAGAAACTCCATTGGAAATAAAGGAAAAGTCACGGAGGGTGATGTCGATCAGCTTCACTACCTCAAGATGGTGGTCAAAGAAACTTTGAGACTACATCCTCCCGTCCCACTTCTACTTCCAAGAGAAACCATAACCCAGAGGAGTTTCTGCCCGAGAGTGGAGCTCGCACTTGCCAATCTTTTATATCGTTTCAATTGGAACTTGCCGAATGGGATGAGGGAGGCAGATATTAACATGGAAGAAGCAGCAGGTCTTACTGTCCGTAAGAAGTTCGCTCTGAACCTTGTGCCAATTCTCCATCACTGTTTCGAGTTTTACCTTAGGGTGAAGTTGAGGTGCATCCCAAGCAAACCTAGGCCTCTTCCGAGGACGCCGATCCATGTGAGTATGAGGAAACTCAGTCACACTTTCCATCTCCATTGGTCGCAATCGGATCGAACCCTAACCCTAACCCTAGTTCTTTCAAAGAGATCGGACACGTTGACGACCATGGTTAGATGCAGGCAAACCGTGGTTGAGTCAACTTTTTTTATATTTTCAAAATGGAATATACGGCACCTAGGGTTAGATGTTCCAAGGGGCAACTCTGTGACCCTGTCATCTATAGGTTTACACAGCGCATCGATGTTGTGCCACGTATCTAATGGGCTCTTTCATCCTCATGAAACAACTTCATTTGCATTTTTTGCCTTAATTTCTTTATCATCTGGTCATATAAAATTGAACAATGCTCTAGCCACTAGAATTGACATCTCAACTCCGGATTTATAA 2577 44.82 MLLQLGVPTVVVSSAEAAREFLKTHDIDCCSRPPLGGTQDLLERSFHEMDGFYQQVIEDHLNPGRVKEEHEDIIDVLLRIEREQSESSALQFTKDNAKAIVMDLFLAGVDTGAITVSWAMTELARNPRIMKKAQAEVRNSIGNKGKVTEGDVDQLHYLKMVVKETLRLHPPAPLLLPRETIKHHLISVYNLEMKANIYLPTLQLMLTSARLLLFASVVNKLCPHKLAIVGAKKSASYEPYGSSQEKTATLYSLLIIFNFFYWQFYISGYSHRICLHPLWSMTKLCSILSLSKFYMGQKKPLPPGPTKLPIIGNLHQLGTLPHYSWWQLSKKYGPIILLQLGVPTVVVSSAEAAREFLKTHDIDCCSRPPLVGLGKFSYNHQDIGFAPYGDYWREVRKICVHEVFSTKRLQSFQFIREEEVALLIDSIAESSSSGSPIDLTERLMSLTANIICRIAFGKSFQVSEFGDGRFQEVVREAMALLGGFTAADFFPYVGRIVDRLTGLHGRLERSFLEMDGFYQRVIEDHLNPGRVKEEHEDIIDVLLKIQRERSESGAVQFTKDSAKAILMDLFLAGVDTGAITLTWAMTELARNPRIMKKAQVEVRNSIGNKGKVTEGDVDQLHYLKMVVKETLRLHPPVPLLLPRETITQRSFCPRVELALANLLYRFNWNLPNGMREADINMEEAAGLTVRKKFALNLVPILHHCFEFYLRVKLRCIPSKPRPLPRTPIHVSMRKLSHTFHLHWSQSDRTLTLTLVLSKRSDTLTTMVRCRQTVVESTFFIFSKWNIRHLGLDVPRGNSVTLSSIGLHSASMLCHVSNGLFHPHETTSFAFFALISLSSGHIKLNNALATRIDISTPDL* 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7031054 7050240 - Vvi1g617 Vvi1g617 769817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g617 858 PANTHER CYTOCHROME P450 71B11-RELATED 35 199 - -
Vvi1g617 858 PANTHER CYTOCHROME P450 71B16-RELATED 292 648 - -
Vvi1g617 858 Pfam Cytochrome P450 39 203 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 Pfam Cytochrome P450 302 647 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 Gene3D Cytochrome P450 4 207 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 PRINTS P450 superfamily signature 625 636 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 PRINTS P450 superfamily signature 572 589 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 PANTHER CYTOCHROME P450 71B16-RELATED 655 702 - -
Vvi1g617 858 PANTHER CYTOCHROME P450 71B16-RELATED 1 40 - -
Vvi1g617 858 PANTHER CYTOCHROME P450 71B16-RELATED 35 199 - -
Vvi1g617 858 Gene3D Cytochrome P450 295 652 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 SUPERFAMILY Cytochrome P450 43 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 PANTHER CYTOCHROME P450 71B11-RELATED 655 702 - -
Vvi1g617 858 PANTHER CYTOCHROME P450 71B11-RELATED 1 40 - -
Vvi1g617 858 PANTHER CYTOCHROME P450 71B11-RELATED 292 648 - -
Vvi1g617 858 SUPERFAMILY Cytochrome P450 302 698 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 PRINTS E-class P450 group I signature 352 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 PRINTS E-class P450 group I signature 624 642 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 PRINTS E-class P450 group I signature 581 607 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 PRINTS E-class P450 group I signature 446 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 PRINTS E-class P450 group I signature 329 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g617 858 PRINTS E-class P450 group I signature 561 578 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g617 Vvi17g856 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g617 - - vvi:100250924 684.871