Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g651 ATGAAGATGAAGCAAGCCAACCCATCAGCCCCTTCCCCTTCTCTTCTCTTCTTTTTTATCCTAACTCTATCGGTGATAGAACTATCCGCCGGAGACCCCAGATCACGAACGATCCAAATGATGTGCGGGAACCAGCGTGAGCACAATTCAACCATCTTCGTCATCAACTTTGTGGCTATGATGGAAAATATCAGTAATCAAATGCGCACTTCTGGTTTTGGCGTGGCTGTTCTTGGCTCTGCACCTGATGCTACCTATGGTCTTGCCCAATGCTATGGAGATCTGTCTTTGCTTGATTGTGTATTATGCTACGCTGAGGCGCGAACATTTCTTCCCCAGTGCTTTCCTTTCACTACGGGTCGCATTTACCTTGATGGTTGCTTTATGCGAGCTCAAAATTACAGCTTCATTGAGGAGTATACAGGACCAAGTGACCATGCTTTGTGTGGAAACGAAACCCGAAAGAACTCCACGTTCCAGGAGTCTGCAAGGCAGGCTATAAAGCAAGCAGTTGCTGATGCACCAAACAATAATGGGTATGCAAGGAGTAAGGTGATGGTGCCGGGAACAGCAAATGAGTCGGCCTATGTGCTGGCTAATTGCTGGAGGACTTTGAATGCAATATCATGTAGGGCGTGTCTGGAGAATGCATCGTCATCGATATTGGGATGCTTGCCTTGGTCTGAAGGGCGGGCACTGAACACAGGGTGCTTCATGAGATACTCAGATACAGATTTCCTCAACAAAGAACCAGATAATGGAAGTTCAAGGGGGACCATAATAATAATAGTAGTATCTGCTGTAAGTGCTGTGATTGTTCTTCTAGTAGGGGGAGCGATTGGAGTTTATATCTTGAAGCAAAGAAAGATCCAAAAGAAAAGGAGAGGTTCCAACGATGCTATAAAATTAGTTAAGACCCTCCATGACAGTAGCTTGAACTTCAAATATGCTACACTTGAGAAGGCCACAGGATCTTTTGACAATGCCAACAAGCTTGGACAAGGAGGATTTGGAACTGTTTATAAGGGAGTTCTGGCTGATGGAAGAGAGATTGCTGTGAAGAGGCTTTTCTTTAACAACAGACACAGAGCAGCAGATTTCTATAATGAAGTTAACATAATAAGCAGTGTTGAGCACAAAAATCTAGTCAGGCTGTTGGGATGCAGTTGCTCAGGGCCTGAAAGCCTTCTCATCTATGAATTTCTGCCAAATAAGAGTCTTGATCGCTTCATCTTCGATACAAACAGAGGTAAAGCACTGAACTGGGAAAAGAGATGTGAGATAATCACTGGGACAGCAGAAGGTCTGGTCTACCTTCATGAAAATTCGAAGATCAGAATTATCCACAGAGATATAAAAGCCAGTAATATTTTGTTGGATTCAAAGATGCGTGCTAAAATAGCTGATTTTGGGTTGGCCAGGTCTTTCCAAGAAGATAAGAGTCACATAAGCACTGCTATTGCAGGAACACTAGGATATATGGCTCCAGAGTACCTGGCCCATGGCCAGTTAACAGAAAAGGCAGATGTCTACAGCTTTGGTGTGCTCTTGTTGGAGATTGCCACAGGAAGGCAGAACAACAGGAGCAAAACTGCAGAATACTCAGACAGCCTAGTCACCATCGCATGGAAGCATTTCCAGCTAGGGACCTTGGAGGAACTTTTTGATCCAAATTTAATGCTGCATAACCACGACAATGGCAACATTAAGAATGAAGTTTTGAGAGTGATGCAGATAGGACTTCTTTGCACCCAAGAGGTTCCATCGTTACGACCATCAATGTCAAAGGCCCTGCAGATGCTGACAAAGAAGGATGAACATCTTCCTACGCCCACTAGTCCCCCATTTATAGATGAAAGGACCATGGAACTTAATGAGGCATGTGAGAACCCATCTTACCCCCTCAATGCTGCCATTTCTGGTTCAGATGCCAGTATCTCCCACAGTTCTTTCTACCCCAGATGA 1965 44.48 MKMKQANPSAPSPSLLFFFILTLSVIELSAGDPRSRTIQMMCGNQREHNSTIFVINFVAMMENISNQMRTSGFGVAVLGSAPDATYGLAQCYGDLSLLDCVLCYAEARTFLPQCFPFTTGRIYLDGCFMRAQNYSFIEEYTGPSDHALCGNETRKNSTFQESARQAIKQAVADAPNNNGYARSKVMVPGTANESAYVLANCWRTLNAISCRACLENASSSILGCLPWSEGRALNTGCFMRYSDTDFLNKEPDNGSSRGTIIIIVVSAVSAVIVLLVGGAIGVYILKQRKIQKKRRGSNDAIKLVKTLHDSSLNFKYATLEKATGSFDNANKLGQGGFGTVYKGVLADGREIAVKRLFFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLIYEFLPNKSLDRFIFDTNRGKALNWEKRCEIITGTAEGLVYLHENSKIRIIHRDIKASNILLDSKMRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIATGRQNNRSKTAEYSDSLVTIAWKHFQLGTLEELFDPNLMLHNHDNGNIKNEVLRVMQIGLLCTQEVPSLRPSMSKALQMLTKKDEHLPTPTSPPFIDERTMELNEACENPSYPLNAAISGSDASISHSSFYPR* 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7490193 7493506 + Vvi1g651 Vvi1g651 769851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g651 654 Gene3D - 34 136 IPR038408 -
Vvi1g651 654 Gene3D - 145 246 IPR038408 -
Vvi1g651 654 Pfam Protein kinase domain 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g651 654 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Vvi1g651 654 ProSiteProfiles Gnk2-homologous domain profile. 35 136 IPR002902 -
Vvi1g651 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 16 633 - -
Vvi1g651 654 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Vvi1g651 654 SUPERFAMILY Protein kinase-like (PK-like) 310 623 IPR011009 -
Vvi1g651 654 Gene3D Phosphorylase Kinase; domain 1 286 401 - -
Vvi1g651 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Vvi1g651 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 16 633 - -
Vvi1g651 654 Pfam Salt stress response/antifungal 48 134 IPR002902 -
Vvi1g651 654 Pfam Salt stress response/antifungal 152 243 IPR002902 -
Vvi1g651 654 ProSiteProfiles Protein kinase domain profile. 326 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g651 654 SMART serkin_6 326 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g651 654 Gene3D Transferase(Phosphotransferase) domain 1 402 611 - -
Vvi1g651 654 CDD STKc_IRAK 332 603 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g651 Vvi17g778 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76514 PF00069 Pkinase 6.70E-47 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g651 - - vvi:100241439 1277.31