Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g807 ATGAATCTCACATCTTCACTAGCCGTCCTTCATCTCTTCTTCTTCTTCTTCTTCTTCTCCTCTTTCTTTGCTGTCGCTGTTGCGATTGAAGACGACGTCGTTTGTCTCCAAGGCCTCAAGGACTCTCTTACAGACCCAGATGATAAGATCAGCACTTGGAGGTTCACCAACACCTCTGCCTCCTTTATCTGCAATCTCGTCGGCGTCTCTTGCTGGAACGCGCAGGAGAGCCGCATCATCAGCCTCCAACTTCCTGATATGAACCTCATCGGTACCTTACCCGACTCCCTTCAGCACTGCCGAAGTCTCCAGAGTCTTGGTCTCTCTGGTAATCGTATCTCGGGCTCAAGAAGTTTTCCGTTGCCAACAATGATCTCTCCGGTTCAATACCGTCCGAGTTCGTTGCTATTAGGTTTTGCGCTTTGGTGGTGGTTTTTCGTTAGGCTGAATCGGAAAAAGAGAGGCTACAGTGGTGGTGATAGTGGCAAGATTGGTGGTAGTTGGGCGGAGCGGTTGCGGATGCACAAACTGGTTCAGGTGTCGCTGTTCCAGAAACCCATTGTAAAGATCAAGTTAGCCGATTTGATGGCGGCTACTAATAATTTTGACCCTGAATATCTTCTTTGTTCTACAAGAACAGGGGTTTCCTATAAGGCTGTGTTGCTGGATGGATCTGCTTTGGCTATCAAACGTCTCAGTGCCTGTAAGCTCAGTGACAAGCAGTTTCGGTCTGAAATGAATAGTACTAGTTTTCATTCACAGCACCACTCGATTGATTGGCCTACTAGGCTTAGGATTGGTGTAGGTGCTGCTAGAGGGCTTGCCTGGCTTCACCACGGTTGTCAACCCCCATACATGCACCAGAACATTAGTTCCAGTGTGATTCTTCTTGATGATGATTATGATGCTCGGATAACGGATTTTGGGTTAGCAAGGCTTGTGGCTTCTGCTGACTCTAATGATAGTTCTTTTGTTAATGGGGACCTTGGAGAATTTGGTTATGTGGCTCCAGAGTACTCGAGCACTATGGTCCCTTCACTAAAGGGCGATGTTTATGGTTTTGGGGTTGTGCTTCTTGAGCTGGTGACTGGGCAGAAGCCTCTGGAGGAAAGCTTTGTAAACTTCATTGTTTTATTATGCACTTAA 1146 47.12 MNLTSSLAVLHLFFFFFFFSSFFAVAVAIEDDVVCLQGLKDSLTDPDDKISTWRFTNTSASFICNLVGVSCWNAQESRIISLQLPDMNLIGTLPDSLQHCRSLQSLGLSGNRISGSRSFPLPTMISPVQYRPSSLLLGFALWWWFFVRLNRKKRGYSGGDSGKIGGSWAERLRMHKLVQVSLFQKPIVKIKLADLMAATNNFDPEYLLCSTRTGVSYKAVLLDGSALAIKRLSACKLSDKQFRSEMNSTSFHSQHHSIDWPTRLRIGVGAARGLAWLHHGCQPPYMHQNISSSVILLDDDYDARITDFGLARLVASADSNDSSFVNGDLGEFGYVAPEYSSTMVPSLKGDVYGFGVVLLELVTGQKPLEESFVNFIVLLCT* 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10044522 10046730 + Vvi1g807 Vvi1g807 770007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g807 381 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Vvi1g807 381 SUPERFAMILY Protein kinase-like (PK-like) 178 371 IPR011009 -
Vvi1g807 381 Gene3D Phosphorylase Kinase; domain 1 162 253 - -
Vvi1g807 381 Gene3D Transferase(Phosphotransferase) domain 1 254 377 - -
Vvi1g807 381 ProSiteProfiles Protein kinase domain profile. 150 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g807 381 Gene3D Ribonuclease Inhibitor 28 129 IPR032675 -
Vvi1g807 381 SUPERFAMILY L domain-like 28 117 - -
Vvi1g807 381 PANTHER - 133 248 - -
Vvi1g807 381 PANTHER - 12 116 - -
Vvi1g807 381 PANTHER - 254 369 - -
Vvi1g807 381 Pfam Protein tyrosine and serine/threonine kinase 254 370 IPR001245 GO:0004672|GO:0006468
Vvi1g807 381 PANTHER OS07G0107800 PROTEIN-RELATED 254 369 - -
Vvi1g807 381 PANTHER OS07G0107800 PROTEIN-RELATED 133 248 - -
Vvi1g807 381 PANTHER OS07G0107800 PROTEIN-RELATED 12 116 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g807 Vvi14g1444 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76522 PF07714 PK_Tyr_Ser-Thr 4.50E-16 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g807 - - vvi:100262086 446.817