Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g909 ATGCATGAACACAAAACCTCAACGTGGGCTCATGCCAAATCATGTAATTTCTTAAGAAGGCCAAGGCTATTTGCTACTGATTCCACCAGCACTAGGATGATGACAAGGCTGCTAAGCAGTTTTCCAATTCAAATTTTTATATTAAAGAAACTGCGCATCTCTCCCAAATCTTATCGTTGTCTCTTTAAAATATTTATTTCCTTGAATCTTCCAAATACAATATGCACCACACCAATTGAGGAAGGAAGAGAATCAATGGAGAAGCAAAGTGAAGTGAAGTTGTTTGGGACATGGTCTAGTGGCTACTGCACCAGAATTAAGTTAGCTCTCAAACTCAAGGGCATACCCTACGAGTACGTAGAAGAAGACCTATCTAACAAGAGCGACTTGCTGATTCACCACAATCCTGTCCACAAGAAGGTGCCCGTACTCGTCCACAATGGGAAAGCCATTGCAGAATCGCTTGTCATCCTTGAATACATTGATGAGCACTGGAACCACACTCCCAAATTGTTGCCGGAGGATCCATATGAGAAAGCCAAAGTTAGATTCTGGGCCAACTTTTATGATCAGAAGTTTAAGCCAAGTATCTACAACATCATGACTTCCAAAGGCAAAGAGCAAGAAAAAGCCATAGAGGACTCCCGTGAGGTGCTTAAGGTGTTTGAAGAAGGCAGAGAGAGAGATTTCCCAGCAAAATCTCCATTCTTGAATGGAGGCCCCTTGGGATTCCTCGATATTGTGGTGGGATCAAGTGCTTGCAATTACAAAGCTATGAATGAGGTAGTTGGTGTGGTTGTCGACCCCAAAAAGAACCCTGCATTTTGCTATTGGATGACTGCGATGAAAGACTGCCCACTGATGAAGGAGACCCTCCCACCTCATGATCGCCTGGTTGCCAAGATGAGATCCAAATTCTCTCTGCAGCCACCTAAAACTTGA 942 43.52 MHEHKTSTWAHAKSCNFLRRPRLFATDSTSTRMMTRLLSSFPIQIFILKKLRISPKSYRCLFKIFISLNLPNTICTTPIEEGRESMEKQSEVKLFGTWSSGYCTRIKLALKLKGIPYEYVEEDLSNKSDLLIHHNPVHKKVPVLVHNGKAIAESLVILEYIDEHWNHTPKLLPEDPYEKAKVRFWANFYDQKFKPSIYNIMTSKGKEQEKAIEDSREVLKVFEEGRERDFPAKSPFLNGGPLGFLDIVVGSSACNYKAMNEVVGVVVDPKKNPAFCYWMTAMKDCPLMKETLPPHDRLVAKMRSKFSLQPPKT* 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11949626 11958474 + Vvi1g909 Vvi1g909 770109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g909 313 CDD GST_N_Tau 92 165 - -
Vvi1g909 313 Pfam Glutathione S-transferase, N-terminal domain 91 163 IPR004045 -
Vvi1g909 313 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 86 305 - -
Vvi1g909 313 SUPERFAMILY GST C-terminal domain-like 163 306 IPR036282 -
Vvi1g909 313 CDD GST_C_Tau 176 303 IPR045074 GO:0004364|GO:0006749
Vvi1g909 313 SFLD Main.3: Omega- and Tau-like 88 305 IPR045073 -
Vvi1g909 313 Gene3D Glutaredoxin 86 171 - -
Vvi1g909 313 ProSiteProfiles Glutaredoxin domain profile. 80 179 - -
Vvi1g909 313 SUPERFAMILY Thioredoxin-like 92 194 IPR036249 -
Vvi1g909 313 SFLD Glutathione Transferase (cytosolic) 88 305 IPR040079 -
Vvi1g909 313 Gene3D - 172 312 - -
Vvi1g909 313 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 90 169 IPR004045 -
Vvi1g909 313 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 86 305 IPR045073 -
Vvi1g909 313 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 175 313 IPR010987 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g909 Vvi17g546 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g909 K00799 - vvi:100260235 485.723