Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g435 ATGGAAGAGAAGGATGGGTTTGTTTCAGCTCGACCGCAAAGAATATTGCCCTTGCATACAACTCATAGCCCTAGTTTCTTGGGGTTGCACCAAGAGTTAGGTTTCTGGAAAGGATCAAACTACGGCAAGGGGGTTATTATTGGAGTTCTGGACACAGGACTATTCCCTGACCATCCTTCATTTAGCGATGAAGGACTACCACCTCCACCAGCTAAATGGAAAGGAAAGTGTGACTTCAATTGGACGTCCTGCAATAACAAAATCATCGGAGCAAGAAATTTTGATAGCGGAGCAGAGGCTGTTCCACCCATTGATGAAGAAGGCCACGGCACCCACACCGCAAGCACAGCTGCAGGGAATTTTGTGCCAAACGCGGATGCGCTCGGGAATGCCAATGGCACGGCTGTTGGCATGGCACCGTTTGCTCACTTGGCAATTTATAAAGTATGTTCCGAATTTGGTTGCGCGGACACTGACATATTAGCAGCACTTGACACTGCCATAGAGGATGGTGTTGATGTACTTTCCCTCTCCCTGGGTGGAGGCTCTGCTCCCTTTTTCGCAGATTCAATTGCACTAGGTGCTTTTTCTGCTATTCAAAAAGGGATATTTGTAAGCTGTTCCGCTGGTAATTCAGGCCCACTCAATGGATCTTTATCAAACGAGGCACCCTGGATACTTACCGTGGGTGCAAGCACCATAGACAGAAAGATAATGGCTACAGCGACGCTTGGAAATGGGGAAGAATTTGATGGCGAATCGCTTTTCCAGCCAAGTGATTTCCCTTCAACATTACTACCTCTCGTGTACGCGGGCGCAAATGGTAATGCCTCCTTGGAAAGCCCTGGTATCTTGAAACCAGACATTATAGGCCCTGCGGCATTGCGGCTTTGA 894 48.21 MEEKDGFVSARPQRILPLHTTHSPSFLGLHQELGFWKGSNYGKGVIIGVLDTGLFPDHPSFSDEGLPPPPAKWKGKCDFNWTSCNNKIIGARNFDSGAEAVPPIDEEGHGTHTASTAAGNFVPNADALGNANGTAVGMAPFAHLAIYKVCSEFGCADTDILAALDTAIEDGVDVLSLSLGGGSAPFFADSIALGAFSAIQKGIFVSCSAGNSGPLNGSLSNEAPWILTVGASTIDRKIMATATLGNGEEFDGESLFQPSDFPSTLLPLVYAGANGNASLESPGILKPDIIGPAALRL* 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4333157 4334766 - Vvi2g435 Vvi2g435 783134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g435 297 Pfam Subtilase family 42 245 IPR000209 GO:0006508|GO:0008236
Vvi2g435 297 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 275 IPR045051 -
Vvi2g435 297 SUPERFAMILY Subtilisin-like 18 294 IPR036852 GO:0004252|GO:0006508
Vvi2g435 297 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 47 58 IPR023827 -
Vvi2g435 297 Gene3D Peptidase S8/S53 domain 44 234 IPR036852 GO:0004252|GO:0006508
Vvi2g435 297 Gene3D - 235 278 - -
Vvi2g435 297 ProSiteProfiles Serine proteases, subtilase domain profile. 26 297 - -
Vvi2g435 297 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 1 275 - -
Vvi2g435 297 PRINTS Subtilisin serine protease family (S8) signature 42 61 IPR015500 -
Vvi2g435 297 PRINTS Subtilisin serine protease family (S8) signature 105 118 IPR015500 -
Vvi2g435 297 CDD Peptidases_S8_3 18 240 IPR034197 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g435 Vvi15g498 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g435 - - vvi:100242816 552.362