Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g442 ATGGAGTTGTTGAGTTGTCTGCTGTGTTTTCTTGCTGCTTGGACTTCAATTTACATCATGTTTTCAGCCAGAAGAGGAAGAAAGCATGCTGCTCACAAACTTCCTCCAGGACCAGTTCCGCTTCCCATAATAGGAAGCCTCTTAAACCTGGGTAACAGACCCCATGAGTCCCTCGCCAATCTTGCAAAAACTTACGGCCCAATTATGACTCTCAAACTTGGCTATGTAACCACAATAGTCATCTCTTCTGCCCCCATGGCCAAAGAAGTCCTCCAAAAGCAGGATCTCTCCTTCTGCAACCGATCCATCCCTGATGCCATCCGAGCCGCAAAACACAACCAACTGTCGATGGCCTGGCTACCTAAAGTGCAAGAGCTTCTTGCGAATGTTGAACAGAGCTGCCAAGCTGGTGGTCCTGTAGATATAGGCCAAGAAGCTTTTAGAACTAGTCTCAACTTACGGATTGATCCACAAAGTATAAGGCGTCGTTTGACAATTTATTTTGGAAGGATGATTGAGATCTTTGATAGAATGATCAAGCAACGGTTACAGCTAAGAAAAAATCAAGGTTCAATAGCTAGCAGTGATGTGTTAGACGTTCTTCTCAACATCAGTGAAGATAACAGCAGTGAGATTGAAAGAAGTCATATGGAACATTTGTTATTGGACTTATTTGCTGCGGGGACTGACACAACTTCGAGCACATTGGAATGGGCAATGGCAGAGCTGCTACACAACCCTGAAACACTTTTGAAAGCCCGAATGGAACTCCTGCAAACCATCGGCCAAGACAAACAGGTGCTGGTGAACGCATGGGCTATAGGTCGAGACCCGAACACATGGGAGAACCCCAACTCATTTGTGCCAGAGAGGTTCTTGGGGTTGGACATGGACGTGAAGGGCCAGAATTTTGAGCTGATTCCGTTTGGTGCTGGCAGGAGAATCTGTCCTGGGCTGCCATTGGCAATCCGGATGGTTCACTTGATGCTGGCCTCGCTCATTCACTCCTATGATTGGAAACTTGAAGATGGGGTGACACCGGAAAACATGAACATGGAAGAAAGATATGGCATTAGTTTACAAAAGGCTCAGCCCCTGCAAGCTCTACCTGTACGGGTTTGA 1122 46.61 MELLSCLLCFLAAWTSIYIMFSARRGRKHAAHKLPPGPVPLPIIGSLLNLGNRPHESLANLAKTYGPIMTLKLGYVTTIVISSAPMAKEVLQKQDLSFCNRSIPDAIRAAKHNQLSMAWLPKVQELLANVEQSCQAGGPVDIGQEAFRTSLNLRIDPQSIRRRLTIYFGRMIEIFDRMIKQRLQLRKNQGSIASSDVLDVLLNISEDNSSEIERSHMEHLLLDLFAAGTDTTSSTLEWAMAELLHNPETLLKARMELLQTIGQDKQVLVNAWAIGRDPNTWENPNSFVPERFLGLDMDVKGQNFELIPFGAGRRICPGLPLAIRMVHLMLASLIHSYDWKLEDGVTPENMNMEERYGISLQKAQPLQALPVRV* 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4399411 4401227 + Vvi2g442 Vvi2g442 783141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g442 373 Gene3D Cytochrome P450 25 263 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g442 373 Pfam Cytochrome P450 35 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g442 373 Pfam Cytochrome P450 260 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g442 373 Pfam Cytochrome P450 152 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g442 373 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 122 153 - -
Vvi2g442 373 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 154 267 - -
Vvi2g442 373 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 261 372 - -
Vvi2g442 373 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 121 - -
Vvi2g442 373 SUPERFAMILY Cytochrome P450 32 370 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g442 373 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 261 372 - -
Vvi2g442 373 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 154 267 - -
Vvi2g442 373 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 2 121 - -
Vvi2g442 373 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 122 153 - -
Vvi2g442 373 Gene3D Cytochrome P450 264 364 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g442 373 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g442 373 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g442 373 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 309 318 IPR017972 GO:0005506|GO:0016705
Vvi2g442 373 PRINTS P450 superfamily signature 227 244 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g442 373 PRINTS P450 superfamily signature 307 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi2g442 373 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi2g442 Vvi15g522 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g442 - K23810 vvi:100232891 667.537