Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g1330 ATGGACTCGAGTGCCTCAACTATTCTCATGCCTCCTCCACTGGAGCTTAAGGATGAGAGGAAAAAAGGAAGTGTGGTTTTTGACTCATCTAAGATGCAAAAACAAGAGAAGTTGCCAACAGAATTCATTTGGCCTGATGCGGATTTAGTTCGGGCCCAACAAGAGCTTAACGAACCCTTGATAGACTTGGATGGATTCTTCAAAGGTGATGAGGCTGCAACTGCCCATGCCGCTGAGCTTATCAGGATGGCTTGCTTGAACCATGGCTTCTTCCAAGTTACCAACCATGGCGTCGACCTAGATCTTATCCGTGCTGCACAGGAAGACATGGGCGCTTTCTTCAAGCTGCCATTGAGCAGGAAGCTCAGTGTCAAGAAGAAGCCTGGCGAATTGTCAGGTTATTCGGGTGCCCATGCGGATCGGTACACTTCTAAGCTGCCGTGGAAGGAGACACTTTCTTTTGTCTATTGTTATGATAGTGGTTCCAAGCCCATGGTAGCTGATTATTTCAAAACTGCCTTAGGTGAAGACTTTGAACAGATAGGGTGGATTTATCAGAAATACTGTGACGCATTGAAGGAGCTGTCTCTAGGGATTATGCAACTCTTGGCAATTAGCTTGGATGTGGATAGTTCCTACTACAGGAAATTATTTGAAGATGGTTACTCAATTATGAGGTGCAACTCCTATCCACCTTGCAAAGAAGCTGGCCTTGTGATGGGCACCGGCCCTCACTGCGACCCAGTGGCTCTAACAATTCTTCATCAAGACCAAGTTAAAGGCCTAGAAGTTTTTGTGGATAACAAATGGCAATCTGTCAAACCTCGACCCGGTGCCCTGGTGGTTAACATTGGTGACACTTTCATGGCACTATCCAATGGAAAATACAAGAGCTGTATACATAGGGCTGTGGTGAACATGGACAAAGAGAGAAGATCATTGACCTTCTTTATGAGCCCGAAAGACGACAAGGTGGTGAGTCCGCCACAGGAGCTTATTGTCAGAGAAGGGCCAAGGAAGTACCCGGACTTCAAATGGTCAGAATTGTTGGAGTTCACTCAGAAGCACTATAGACCCAATAATGATACTCTCCAGAGCTTTGTGGAATGGCGTCTCTCATCTCAAACCAAATAA 1134 46.03 MDSSASTILMPPPLELKDERKKGSVVFDSSKMQKQEKLPTEFIWPDADLVRAQQELNEPLIDLDGFFKGDEAATAHAAELIRMACLNHGFFQVTNHGVDLDLIRAAQEDMGAFFKLPLSRKLSVKKKPGELSGYSGAHADRYTSKLPWKETLSFVYCYDSGSKPMVADYFKTALGEDFEQIGWIYQKYCDALKELSLGIMQLLAISLDVDSSYYRKLFEDGYSIMRCNSYPPCKEAGLVMGTGPHCDPVALTILHQDQVKGLEVFVDNKWQSVKPRPGALVVNIGDTFMALSNGKYKSCIHRAVVNMDKERRSLTFFMSPKDDKVVSPPQELIVREGPRKYPDFKWSELLEFTQKHYRPNNDTLQSFVEWRLSSQTK* 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23382367 23384135 - Vvi4g1330 Vvi4g1330 786109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g1330 377 Pfam 2OG-Fe(II) oxygenase superfamily 224 320 IPR044861 -
Vvi4g1330 377 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 157 IPR026992 -
Vvi4g1330 377 Gene3D - 29 358 IPR027443 -
Vvi4g1330 377 PRINTS Isopenicillin N synthase signature 81 98 - -
Vvi4g1330 377 PRINTS Isopenicillin N synthase signature 245 266 - -
Vvi4g1330 377 PRINTS Isopenicillin N synthase signature 308 326 - -
Vvi4g1330 377 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 18 373 - -
Vvi4g1330 377 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 18 373 - -
Vvi4g1330 377 SUPERFAMILY Clavaminate synthase-like 32 359 - -
Vvi4g1330 377 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 221 320 IPR005123 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g1330 Vvi18g1101 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g1330 K05282 - vvi:100255041 773.467