Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g45 ATGTTTACGCGTTTGTTCGGGAAACCTAAGCAGGAGGCCAATGCCCTAACAACATTGGACAAGTTAAACGAGACACTTGAAATGCTAGAGAAAAAAGAAGGTGTCCTTTTGAAGAAGGCCGCTGCAGAGGTTGAAAAGGCTAAGGAATTTACTAGAGCAAAGAACAAAAGGGCGGCAATACAATGTTTAAAGAGGAAGAGGCTCTATGAACAGCAAATTGAACAACTTGGAAATTTCCAATTGCGCATTCATGATCAGATGATATTGCTAGAAGGTGCCAAAGCTACAACAGAGACTGTTGATGCATTGAGGACTGGAGCTTCTGCGATGAAGGCAATGCAAAAGGCGACGAATATTGATGATGTTGACAAAACAATGGATGAGATTAATGAGCAGACAGAGAACATGAAACAGATTCAGGAGGCATTAGCCACACCCATTGGTGCAGCAGCTGATTTTGATGAAGATGAATTGGAAGCAGAGCTTGAAGAATTAGAAGGAGCTGAATTGGAGGAACAGCTTCTCCAGCCTGCCACAACTGCCCCAGCAGCACCAATCCCTGCAGGCAGAGTACCAGCCCGCCCAGCTCCTCAGAGGAACACTGCTGAGGATGATGAGCTTGCTGCATTACAGGCAGAGATGGCACTTTAA 651 45.31 MFTRLFGKPKQEANALTTLDKLNETLEMLEKKEGVLLKKAAAEVEKAKEFTRAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPAGRVPARPAPQRNTAEDDELAALQAEMAL* 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 557910 563227 - Vvi4g45 Vvi4g45 784824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g45 216 MobiDBLite consensus disorder prediction 175 216 - -
Vvi4g45 216 Gene3D - 13 91 - -
Vvi4g45 216 PANTHER SNF7 FAMILY-RELATED 1 216 - -
Vvi4g45 216 Gene3D - 117 172 - -
Vvi4g45 216 Coils Coil 122 142 - -
Vvi4g45 216 Coils Coil 12 39 - -
Vvi4g45 216 Coils Coil 151 175 - -
Vvi4g45 216 Pfam Snf7 20 185 IPR005024 GO:0007034
Vvi4g45 216 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 216 IPR005024 GO:0007034
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g45 Vvi9g222 ECH
Vvi4g45 Vvi11g231 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g45 K12194 - vvi:100242412 318.931