Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g222 ATGTTCAGCCGAGTGTTCAGGAAAGGTAAAGAGCAAAGTCAAACAAATGCAGTCGCAACTCTGGACAAGCTAAACGAGACACTTGAAATGCTTGAGAAAAAAGAGAGAGTTCTCATAAAGAAAGCCTCCGCTGAGGTTGAAAAGGCTAAGGAATATACTAAAGCAAAGAACAAAAGGGCTGCTATACAATGTTTGAAGAGGAAGAGGCTGTATGAACAGCAAATTGAGCAGCTTGGAAATTTCCAATTGCGCATTCATGATCAGATGATCCTGCTAGAAGGAGCGAAAGCCACAACTGAGACTGTTGATGCATTGAGAACTGGAGCAGCTGCAATGAAGACCATGCACAAAACAACAAACATTGATGACTTGGACAAGACGATGGATGAAATCAATGAGCAAACTGAAAACATGAAACAGATTCAGGAAGCACTGTCAACTCCTATTGGTTCAGCAGCTGATTTTGATGAGGATGAGTTGGAAGCGGAGCTTGAGGAACTGGAAGGGCTGCTAGGCAGCCAGCACGTCCTGCTCCTCAGAAGAGCACAGCTGAGGATGATGAGCTCGCTGCATTACAGGCAGAATTGGCACTTTAAAGAGGTTCCTTTCATGGAGTAA 618 44.17 MFSRVFRKGKEQSQTNAVATLDKLNETLEMLEKKERVLIKKASAEVEKAKEYTKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKTMHKTTNIDDLDKTMDEINEQTENMKQIQEALSTPIGSAADFDEDELEAELEELEGLLGSQHVLLLRRAQLRMMSSLHYRQNWHFKEVPFME* 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2482868 2486756 - Vvi9g222 Vvi9g222 791933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g222 205 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 172 IPR005024 GO:0007034
Vvi9g222 205 PANTHER SNF7 FAMILY-RELATED 1 172 - -
Vvi9g222 205 Coils Coil 121 144 - -
Vvi9g222 205 Gene3D - 15 93 - -
Vvi9g222 205 Coils Coil 14 41 - -
Vvi9g222 205 Pfam Snf7 22 174 IPR005024 GO:0007034
Vvi9g222 205 Gene3D - 119 171 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g478 Vvi9g222 ECH
Vvi4g45 Vvi9g222 ECH
Vvi9g222 Vvi11g231 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g222 K12194 - vvi:100258281 292.737