Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g83 ATGGGTTTGAAGAAGGGTACGTGGAAATATGCGTTTCCCAGCTGTTTCAGGCATACCGGCTCCAGGAATGTTGCTTTGAAACGAAGGTCGCTGAAGAGGCTGTGTAGTTCTCGCATTGCGACAGACCTTGATGTGTTTACTCTGGCGGAGGTGAGGGCGATTACTCATAACTTCTCTTCGAGTAGTTTTCTGGGTGAAGGTGGGTTCGGACCAGTGTACAAGGGGGTCATTGATGAGAAGGTTAGGCCTGGATTTAAGGCTCAGCAGGTGGCTGTTAAGGTGCTGGATTTGGATGGTCAGCAAGGCCATAGGGAGTGGCTGGCTGAAGTAATCTTTCTTGGGCAATTGAGGCATCCCCATCTGGTGAAATTGATTGGATATTGCAGTGAGAAGGAGCAAAGGGTGCTGATATATGAATACATGGCTAAGGGAAACTTGGAGAACCAGCTCTTCAGAAGATATTCAGCTTCTTTGCCATGGACAACAAGAGTCAAGATTGCTCTAGAGGCTGCAAAGGGCCTTGCTTTCCTCCATGAAGAGGAGAATCCAGTGATATTCCGAGATTTCAAGGCTTCAAACATCTTATTGGACTCGGACTATACTGTTAAGCTCTCTGATTTTGGCCTAGCAAAGGATGGTCCAGAAGGTGATGAAACGCATGTCACGACTCGGGTTATGGGGACAGAAGGCTATGCTGCTCCGGAATATATCATGACTGGTCATTTGACAACAATGAGCGACGTATACAGCTTTGGTGTAGTGCTTTTAGAGCTGCTAACAGGGAGACGGTCCACGGACAAGAGCCGGCCCAGTAGAGAGCAGAACCTGGTGGGGTGGGCATTGCCATTTTTGAAGGATCCCCAGAAGCTCAAGCGAATAATCGACCCCAAGCTCGAAGGGATGTACTCAACAGAAGGAGCCAAGAGGGTAGCCATGCTGGCCAACCAATGCTTGAGCCAAAAGGCCAAGTGCAGACCCAGAATGAGCTCTGTGGTCAAGACTTTAGAATCTCTCATGGACTTGGCAGACACTGGATTTATGCCTTTTGTCTACATTGTCCCAGCAGAAGGCCAAAAGAAAGGTGAAGCACAAATTACCTTAAGGGTGTGTGGGAAAGATGAAGCAGAAGCAGAAGCAGAAGCTAATCACAACAATGGAAAAGAAGCTGGAAAAAAAGACGAAAATAAAGAGATTGGGCTGCTCAAATGTCCTAAAGGCCTTAGACATACGCATAGATTGAGTCAATTCAGGTCAGGTCCTGTATACTCTGATAATAAATTTTGTATCACTCTTCAAACTGGCATGAACTGCACAAATCAGTAG 1323 46.86 MGLKKGTWKYAFPSCFRHTGSRNVALKRRSLKRLCSSRIATDLDVFTLAEVRAITHNFSSSSFLGEGGFGPVYKGVIDEKVRPGFKAQQVAVKVLDLDGQQGHREWLAEVIFLGQLRHPHLVKLIGYCSEKEQRVLIYEYMAKGNLENQLFRRYSASLPWTTRVKIALEAAKGLAFLHEEENPVIFRDFKASNILLDSDYTVKLSDFGLAKDGPEGDETHVTTRVMGTEGYAAPEYIMTGHLTTMSDVYSFGVVLLELLTGRRSTDKSRPSREQNLVGWALPFLKDPQKLKRIIDPKLEGMYSTEGAKRVAMLANQCLSQKAKCRPRMSSVVKTLESLMDLADTGFMPFVYIVPAEGQKKGEAQITLRVCGKDEAEAEAEANHNNGKEAGKKDENKEIGLLKCPKGLRHTHRLSQFRSGPVYSDNKFCITLQTGMNCTNQ* 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 845750 847480 - Vvi9g83 Vvi9g83 791794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g83 440 SUPERFAMILY Protein kinase-like (PK-like) 36 336 IPR011009 -
Vvi9g83 440 ProSiteProfiles Protein kinase domain profile. 58 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g83 440 Gene3D Transferase(Phosphotransferase) domain 1 141 345 - -
Vvi9g83 440 CDD STKc_IRAK 64 338 - -
Vvi9g83 440 Gene3D Phosphorylase Kinase; domain 1 19 140 - -
Vvi9g83 440 Pfam Protein tyrosine and serine/threonine kinase 62 335 IPR001245 GO:0004672|GO:0006468
Vvi9g83 440 PANTHER BNAA02G16030D PROTEIN 30 395 - -
Vvi9g83 440 PANTHER OS01G0588500 PROTEIN-RELATED 30 395 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g173 Vvi9g83 ECH
Vvi9g83 Vvi11g76 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76877 PF07714 PK_Tyr_Ser-Thr 4.60E-50 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g83 - - vvi:100265158 865.529