Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe02g01619 CTTTTCACTTCAAGCAATCAGACCGAAGGGATGGATTTGAAGAGTAGGAGGGGCAGGCCGAGGTTGGATCGCCGTAATGCGGCCAAGCACATTGAGTACGATGCACTGGCTTCATCTTCTTTGCCTGACGATTCTTCTGGATCGCTGCATACCCGCTCGCTTGAACTTCCGGATAAAACGAGCTTCCGAATAGGGGGAAGTGATGGGGAATTTGATCGTATATGTCGGAGTTTGGGGCTTTCAGGGCCGGACGACTTTACTATTCCTGCGTCGGCGTATCAATCTACGAATATCCGTTCCTCGTCTGATCGTCTACCCCACTCCAGGCTGCATAGGTTGGATAGAACTTGGGTGGAGGATGTGAAGGAGGAAGAAGACAGTGAAGCGGAAGCTGAGCTACGTGAGAGAGCAAGGGAATCGGTTAAAATTAGGGATTCGACTAAGTTACCTCGTTATGAAACAGCCGAGCTGAGTGGGAACGGGATCGTCAGTGGTAGTAGTGGAGGTGGAGGAGGCGCTGGTGGTGGAATTAAGGGTGTTCGTCCACCATTGGTTAAGCCCCCGCCTTTTATGCGCCCTCCGGTTCATGATAATGCTTCCTCAACTTGGGACATTTTCAGGGATTTTGCTCCTAATGATGAAGTAAGACCTTCAGTGGTGGTTCAAGAAGGAAACGATTCTCCTTCCGAAGATAATCACGAAGATGGAGTTGAATCCGAAGTGGGGGTCGTGGAACGAGAAGAGGGTGGAGGCACAGGCAGACTTGACGATAGTCTTCGTGAACAGTCAAATTCACCTTCATTTTCAACTTCAAATGATGATGATTCTTCAAGCACAACCACAGAGCCTTATATATCTCCAAATGGGAGACTGAAGCGGACTATTTCGAATTGGCAAAAGGGTGAACTTCTGGGGCGAGGATCATTTGGATCGGTGTACGAAGGAATTTCTGGTGATGGGTTTTTTTTCGCTGTCAAGGAAGTTTCACTGCTTGATCAAAACAATCAGGGACAACAAAGTATTATACAGCTTCAGCAGACGTATTTATTTTCTTCTGTTATTTACTCATACTCTGCTATTTATAAGTCCCAACTCTCAACAAGATCCATGAAAGAGATTGCTCTTTTAAGTCACTTTGAGCACGAGAATATAGTGCAATATTACGGCACCGAGAAGACTGAATCACACCTATTCATTTTTCTTGAGCTTGTGACAAAAGGATCCCTTATGAAGCTCTATCAGACGTATCATCTTATAGATTCTCAAGTTTCTGTATATACCAGACAAATTTTGCATGGTTTGAAATATCTTCATGATCAAAACGTGGTTCACAGGGATATTAAATGTGCGAATATATTAGTGAAATCCAGTGGAGCAGTAAAGCTTGCGGATTTTGGGTTGGCAAAGGCAACAAAAATGAATGATATTAAATCCTGCAAGGGAACAGCATTCTGGATGGCACCTGAGGTCGTTAATAGGAAGAACCAAGGATATGGTCACCCAGCTGATATTTGGGGCCTTGGTTGCACTGTATTGGAGATGTTAACAGGCAAAATTCCATACTCTGAGTTGGACAATCCAATGTCGGCATTGTTTAAAATCGGAAGTGGTAAGCTACCAGTTGTTCCGGATTGTCTATCAACAGATGCACGTGATTTTGTACTGCAGTGCTTACAGCCTAACCCACATGACCGTCCATCTGCTGCTCAACTCTTAGAGCATCCATTTGTGAAGAGATCTCTTCCTACTTCCTCAGGGCCTCAGTCGCCTACTCATCTAGCAGAAGGAAATAAAACTTTCTCCATGATAAGACTGTGA 1818 44.83 LFTSSNQTEGMDLKSRRGRPRLDRRNAAKHIEYDALASSSLPDDSSGSLHTRSLELPDKTSFRIGGSDGEFDRICRSLGLSGPDDFTIPASAYQSTNIRSSSDRLPHSRLHRLDRTWVEDVKEEEDSEAEAELRERARESVKIRDSTKLPRYETAELSGNGIVSGSSGGGGGAGGGIKGVRPPLVKPPPFMRPPVHDNASSTWDIFRDFAPNDEVRPSVVVQEGNDSPSEDNHEDGVESEVGVVEREEGGGTGRLDDSLREQSNSPSFSTSNDDDSSSTTTEPYISPNGRLKRTISNWQKGELLGRGSFGSVYEGISGDGFFFAVKEVSLLDQNNQGQQSIIQLQQTYLFSSVIYSYSAIYKSQLSTRSMKEIALLSHFEHENIVQYYGTEKTESHLFIFLELVTKGSLMKLYQTYHLIDSQVSVYTRQILHGLKYLHDQNVVHRDIKCANILVKSSGAVKLADFGLAKATKMNDIKSCKGTAFWMAPEVVNRKNQGYGHPADIWGLGCTVLEMLTGKIPYSELDNPMSALFKIGSGKLPVVPDCLSTDARDFVLQCLQPNPHDRPSAAQLLEHPFVKRSLPTSSGPQSPTHLAEGNKTFSMIRL 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19064137 19070627 + Bpe009466.1 Bpe02g01619 99768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe02g01619 605 ProSiteProfiles Protein kinase domain profile. 298 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01619 605 MobiDBLite consensus disorder prediction 39 55 - -
Bpe02g01619 605 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Bpe02g01619 605 MobiDBLite consensus disorder prediction 581 596 - -
Bpe02g01619 605 MobiDBLite consensus disorder prediction 159 197 - -
Bpe02g01619 605 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 111 - -
Bpe02g01619 605 SMART serkin_6 298 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01619 605 Pfam Protein kinase domain 299 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe02g01619 605 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 174 347 - -
Bpe02g01619 605 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 371 587 - -
Bpe02g01619 605 MobiDBLite consensus disorder prediction 227 255 - -
Bpe02g01619 605 MobiDBLite consensus disorder prediction 214 290 - -
Bpe02g01619 605 MobiDBLite consensus disorder prediction 1 61 - -
Bpe02g01619 605 MobiDBLite consensus disorder prediction 257 290 - -
Bpe02g01619 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Bpe02g01619 605 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 14 111 - -
Bpe02g01619 605 MobiDBLite consensus disorder prediction 12 31 - -
Bpe02g01619 605 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 174 347 - -
Bpe02g01619 605 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 371 587 - -
Bpe02g01619 605 MobiDBLite consensus disorder prediction 580 605 - -
Bpe02g01619 605 SUPERFAMILY Protein kinase-like (PK-like) 271 585 IPR011009 -
Bpe02g01619 605 Gene3D Transferase(Phosphotransferase) domain 1 295 599 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00081 Bpe02g01619 CCT
Bpe02g01619 Bpe14g00364 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01619 Bpe-Chr2:19064137 Bpe03g00140 Bpe-Chr3:1911806 1.61E-77 dispersed
Bpe06g00511 Bpe-Chr6:16298357 Bpe02g01619 Bpe-Chr2:19064137 7.93E-19 transposed
Bpe12g00747 Bpe-Chr12:12984004 Bpe02g01619 Bpe-Chr2:19064137 2.21E-140 transposed
Bpe14g00364 Bpe-Chr14:3471716 Bpe02g01619 Bpe-Chr2:19064137 0 wgd
Bpe02g00081 Bpe-Chr2:608986 Bpe02g01619 Bpe-Chr2:19064137 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63193 PF00069 Pkinase 3.30E-62 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe02g01619 K13414 - pop:7463181 622.083