Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma12g00488 ATGGCATCCAAATCTCCCCCGTCGTCAGCCGAGAAGCATAGAGATTTCTTCAATCATCTCGAAGCTTACCTCGCAAAGAGAGACGGCGTTGACAAGCTCTTGAAAATCTCCAGGTACGCCACCAAGATCATCCTCTCCTCTTCCGCCCTTCCCGAATCCCTTCCTCTCACGCAACGTCTCAAGAGCTTCGAGTCCAACGTCGGCGTCAGCCGTAAAGCCTTCCGCCTTGGGAAGTTCGTGCAGGACCTCAACGCTTTGAGAAACTCGCATTTTGAATCGAGCCAAGAACTTGTGCTCGCGATCGTCGCGTATGGCGGCGAGGGGATTTATTACTTCATCGAACAGTTTATTTGGTTGGTTAAAGCTGGTTTGATTGATAAACGATACTCTAGTCGTCTGCAGAAGATCAGTGGGTGGGCGGAATTTATTGGTTATATTGGGAGTATTTCGTTGAAATTTAGGGATTTCAATCAGATTGTTGAAGACGAGGCGTGTTTGAAAGCGAGTATGGATATTGCGGTGTCTAAGGGAGATGGAAATCGGGAAGAGGAAGAGAAGATGAAGAAGTTGCAGGCGAAAAAATTGATGAAGAAACTTTCAATCGTTCAAGACTTTGCCGATGGATTCATGGCGTTGGCTGACATTCGTGATGGGAATGGCCGGCTTTCAGGGCCACTTTTTCTATCTTGTGCTGGGCTTCTCTCGGCTTTGATTAGCACCCATAAGAACTGGATATCATGCTGA 744 47.45 MASKSPPSSAEKHRDFFNHLEAYLAKRDGVDKLLKISRYATKIILSSSALPESLPLTQRLKSFESNVGVSRKAFRLGKFVQDLNALRNSHFESSQELVLAIVAYGGEGIYYFIEQFIWLVKAGLIDKRYSSRLQKISGWAEFIGYIGSISLKFRDFNQIVEDEACLKASMDIAVSKGDGNREEEEKMKKLQAKKLMKKLSIVQDFADGFMALADIRDGNGRLSGPLFLSCAGLLSALISTHKNWISC 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2538169 2538912 - CmaCh12G004880.1 Cma12g00488 304978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma12g00488 247 PANTHER PEROXISOMAL MEMBRANE PROTEIN 11A 9 247 - -
Cma12g00488 247 Pfam Peroxisomal biogenesis factor 11 (PEX11) 18 244 IPR008733 GO:0005779|GO:0016559
Cma12g00488 247 PANTHER PEROXISOMAL BIOGENESIS FACTOR 11 9 247 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma05g00226 Cma12g00488 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g00488 Cma-Chr12:2538169 Cma05g00226 Cma-Chr5:963953 6.07E-155 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma12g00488 - - cpep:111798495 450.669