Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo18g00165 ATGGCAGCTCTTTCTAACAAATATGGCCCTCTAATGCTCCTAAAGCTTGGCCAGAGGCAAACCCTTGTGGTTTCATCAGCAAAAATGGCTAGAGAAGTGATGAAGAGCCATGACATCATATTCTCCAACAGGCCCCAAACCACTGCCGCACAGGAACTGCTGTACCAATGTCAAGACATTGTCTTTGGTCAATATGGTGCGTACTGGAGACAAGCCAGGAAAGTGTGCGCTCTTGAGCTTTTTAGTGTCAAAAGAGTGATCTCCTTTCAGCACGTAAGGGATGAGGAAGTTGGTGGGCTGATGGACAGGATTAGTGAAGCTAGTGTGAGCGGTGAGACTGTGAATCTTAGCCAGTTGTTCCTTCAAACCTCGAACAATATAGTGTCCAGATGTGTTTTGGGAGAGAAATTTGAGGATGAAAATGGGAATAGTCGATTTGGGGACATAACCAGAAGGAGTATGGTGCTAATTGCGGCGTTTTGTGTAGCTGATTTTTTTCCTTCTCTTTGGTGGATTGATGTCATTAGAGGGTTCAATAAGGAGTTGAAAGATTGTTCCAAAATATTGGATACATTTGTTAGTAAAGTGGTTGAAGAACACAAAGCAAAGAAAAGAGATGGTGTTGGAACTGATGAACCTAAGAAGGATTTTGTGGATATCATGTTGCAGCTCCAACAGGATGACATGGTTGACTATCATTACTCTCCTGACAACCTCAAAGCAACGTTGCTGGACATGTTTGTTGGAGGAAGTGACACAACAGCAACGGTATTGGAGTGGACAATGACAGAGCTGATGAGAAACCCAGCCGCCATGAAGAAAGTTCAAGAGGAAGTAAGAACAATAACAGGAAAGAAACCAAAGATCGAAGCGGAAGATATTCAAAAAATGGAGTACATGCACTCTATCATAAATGAATCTTTGAGGCTCCACCCGCCAATTCCTCTACTAGTGCCACGAGAAACAACAGCAGATGTGGAGATCGATGGCTACCATATTCCATCAAAAACAAGAGTTTTTGTGAATGCTTGGAAAATCCATAGGGATCCCGAATATTGGCTCAATCCAAACGAGTTCATTCCAGAGAGGTTTATGGATAATAGATCCGTGGATTACAAAGGTCAAAACTACGAGTATATTCCGTTTGGGAGTGGAAGAAGGAAGTGCCCAGGAATGTCATTTGGGGTTTCTTCATTTGAACAGGCATTGGCTAATCTTCTCCATTGGTTTGATTGGAAGCTTCCCAGTGGCTGTGAATTGAGCGTTGAAGAAGAAAATGGCATCACTGTTCGCAAGAAAACCCCCCTCGTCCTTAACCCAATACCATGGTTCTAA 1335 43.07 MAALSNKYGPLMLLKLGQRQTLVVSSAKMAREVMKSHDIIFSNRPQTTAAQELLYQCQDIVFGQYGAYWRQARKVCALELFSVKRVISFQHVRDEEVGGLMDRISEASVSGETVNLSQLFLQTSNNIVSRCVLGEKFEDENGNSRFGDITRRSMVLIAAFCVADFFPSLWWIDVIRGFNKELKDCSKILDTFVSKVVEEHKAKKRDGVGTDEPKKDFVDIMLQLQQDDMVDYHYSPDNLKATLLDMFVGGSDTTATVLEWTMTELMRNPAAMKKVQEEVRTITGKKPKIEAEDIQKMEYMHSIINESLRLHPPIPLLVPRETTADVEIDGYHIPSKTRVFVNAWKIHRDPEYWLNPNEFIPERFMDNRSVDYKGQNYEYIPFGSGRRKCPGMSFGVSSFEQALANLLHWFDWKLPSGCELSVEEENGITVRKKTPLVLNPIPWF 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1158785 1160761 - CmoCh18G001650.1 Cmo18g00165 401938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo18g00165 444 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 443 - -
Cmo18g00165 444 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 382 391 IPR017972 GO:0005506|GO:0016705
Cmo18g00165 444 PRINTS E-class P450 group I signature 301 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PRINTS E-class P450 group I signature 342 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PRINTS E-class P450 group I signature 5 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PRINTS E-class P450 group I signature 29 50 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PRINTS E-class P450 group I signature 123 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PRINTS E-class P450 group I signature 389 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PRINTS E-class P450 group I signature 379 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PRINTS E-class P450 group I signature 238 255 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PRINTS E-class P450 group I signature 258 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 Pfam Cytochrome P450 2 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 443 - -
Cmo18g00165 444 PRINTS P450 superfamily signature 380 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PRINTS P450 superfamily signature 302 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 PRINTS P450 superfamily signature 249 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 Gene3D Cytochrome P450 1 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo18g00165 444 SUPERFAMILY Cytochrome P450 2 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo10g00092 Cmo18g00165 CCT
Cmo13g00794 Cmo18g00165 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo18g00165 Cmo-Chr18:1158785 Cmo18g00169 Cmo-Chr18:1173597 0 dispersed
Cmo18g00172 Cmo-Chr18:1186032 Cmo18g00165 Cmo-Chr18:1158785 4.38E-31 dispersed
Cmo18g00164 Cmo-Chr18:1153072 Cmo18g00165 Cmo-Chr18:1158785 6.41E-57 tandem
Cmo18g00165 Cmo-Chr18:1158785 Cmo18g00166 Cmo-Chr18:1163363 3.77E-98 tandem
Cmo10g00091 Cmo-Chr10:399381 Cmo18g00165 Cmo-Chr18:1158785 2.43E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo18g00165 K20617 K00495 csv:101207136 652.514