Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe03g01253 ATGCGCAGGTGGCTTTGTTGTACTTGTCAAGTTGAGGAAGCCTACCCATTAGCAGAAAGTGAGCACCTGAAAAGCCCACGAAGTTATGGAGATGGTTATTATCGACGGGACTCGAAAGAGCCGGCTCCTGCCCCATATGAAGCACCAAAATCTCCACCTCCCATAGAAGTGCCAGCATTGTCTCTGGAAGAACTGAAAGAAAAGACAGACAACTTTGGGTCCAAGGCACTGATTGGCGAAGGATCTTATGGTCGAGTTTATTTTGCTAACTTAAACAATGGGAAATCTGTGGCGGTAAAGAAGCTGGATGTTTCGTCTGAATCTGATTCGAGTATTGACTTCTTGACTCAGGTTTCTACAGTCTCAAGGTTGAAACATGAAAATTTTGTTGAATTGCATGGATATTGTGTTGAAGGAAACCTCCGTGTACTTGCATATGAATTTGCAACTATGGGTTCTCTACACGACATATTGCATGGTAGAAAGGGTGTGCAAGGGGCACAGCCAGGTCCCGTGCTTGATTGGATACAGCGTGTGAGAATTGCGGTTGATGCAGCTCGAGGATTGGAATACTTGCACGAGAAAGCTACCCCAAGACTAAGTGAAGACAAAGTTAAACAATGTGTTGATCCAAGGCTGAAGGGTGAATATCCTCCCAAAGGAGTTGCCAAGCTGGCTGCTGTGGCAGCTCTGTGTGTCCAGTACGAAGCGGAGTTCAGGCCGAACATGAGCATCGTCGTTAAGGCTCTCCAGCCGCTTCTAAGGCCTCCTGCCCCGGCTCATGCTCCGGAACCGTGA 798 47.62 MRRWLCCTCQVEEAYPLAESEHLKSPRSYGDGYYRRDSKEPAPAPYEAPKSPPPIEVPALSLEELKEKTDNFGSKALIGEGSYGRVYFANLNNGKSVAVKKLDVSSESDSSIDFLTQVSTVSRLKHENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWIQRVRIAVDAARGLEYLHEKATPRLSEDKVKQCVDPRLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLRPPAPAHAPEP 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10153402 10157661 + Cp4.1LG03g12600.1 Cpe03g01253 466970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe03g01253 265 Gene3D Transferase(Phosphotransferase) domain 1 150 197 - -
Cpe03g01253 265 Gene3D Transferase(Phosphotransferase) domain 1 198 256 - -
Cpe03g01253 265 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 196 262 - -
Cpe03g01253 265 PANTHER TYROSINE-PROTEIN KINASE, NON-RECEPTOR JAK/TYK2-RELATED 1 198 - -
Cpe03g01253 265 PANTHER TYROSINE-PROTEIN KINASE, NON-RECEPTOR JAK/TYK2-RELATED 196 262 - -
Cpe03g01253 265 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 198 - -
Cpe03g01253 265 SUPERFAMILY Protein kinase-like (PK-like) 62 255 IPR011009 -
Cpe03g01253 265 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Cpe03g01253 265 MobiDBLite consensus disorder prediction 21 54 - -
Cpe03g01253 265 Gene3D Phosphorylase Kinase; domain 1 48 148 - -
Cpe03g01253 265 ProSiteProfiles Protein kinase domain profile. 72 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe03g01253 265 MobiDBLite consensus disorder prediction 21 43 - -
Cpe03g01253 265 Pfam Protein tyrosine and serine/threonine kinase 77 196 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01253 Cpe17g00994 CCT
Cpe03g01253 Cpe08g00093 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01547 Cpe-Chr2:13126429 Cpe03g01253 Cpe-Chr3:10153402 3.74E-54 dispersed
Cpe03g00826 Cpe-Chr3:5163373 Cpe03g01253 Cpe-Chr3:10153402 2.63E-68 dispersed
Cpe03g01253 Cpe-Chr3:10153402 Cpe17g00994 Cpe-Chr17:7541379 1.10E-33 dispersed
Cpe03g01253 Cpe-Chr3:10153402 Cpe08g00093 Cpe-Chr8:579297 6.92E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62301 PF07714 PK_Tyr_Ser-Thr 5.70E-18 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe03g01253 K13436 - csv:101215403 359.377