Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe14g00855 | ATGGAGGGAGGAGAAGGGGATGCCGGAAATGGGGCTACTGCAGCTGCAGGATCAAGTCCTCCGAGACCTGAGATGGCAGCTCCGGCACCGGAAGGTGGCGGTCCGGTGAGTTCTGCCGCGGCGGTGGCGGGGAAGAAGAAGAGGGGAAGACCGAGGAAGTATGGGCCGGACGGGAAGTTGAATTTGGCGGCGCTGTCGCCGAAGCCGATATCGGCGTCGGCACCTGCACGGTCGGCGGTGATTGATTTCTCGGCGGAGAAACGTGGGAAAGTGCGGCCGGCGAGTTCGTTGAGCAAAACCAAACATGAAACGGAGAATTTAGGGGTTAATTTTGGTTGTTATGAAGGTGAATGGGTACCTTGTTCAGTTGGAGCTAATTTCACACCCCATATCATCACTGTCAACACTGGTGAGGACGTTACGATGAAGGTTCTCTCCTTTTCTCAACAAGGACCTCGAGCCATTTGTATTCTCTCTGCTAACGGTGTGATTTCGAGCGTCACTCTTCGTCAACCCGATTCTTCTGGAGGAACATTAACATATGAGGTGGTAGTAGGAAGCTTTATATTTGGGAACCAACACGAGCAAAAGTCGAAGAAGCCGAAACAAGATGTTATATTACCGGTTTCTTTTTTTCCAATTTCGAGTGTTGAACCGAAATCATACATGACAACAACGACGACGACGACGACAACATCTTCCCTTCGTGCTGAAACGTGGTCACCTTTAGTTCCAGATTTAAAGAGTCAACCAACTGATATCAATGTATCGTTAACTAGTGGTTAA | 786 | 49.75 | MEGGEGDAGNGATAAAGSSPPRPEMAAPAPEGGGPVSSAAAVAGKKKRGRPRKYGPDGKLNLAALSPKPISASAPARSAVIDFSAEKRGKVRPASSLSKTKHETENLGVNFGCYEGEWVPCSVGANFTPHIITVNTGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEVVVGSFIFGNQHEQKSKKPKQDVILPVSFFPISSVEPKSYMTTTTTTTTTSSLRAETWSPLVPDLKSQPTDINVSLTSG | 261 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 7073358 | 7075469 | + | Cp4.1LG14g08590.1 | Cpe14g00855 | 481239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe14g00855 | 261 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 129 | 175 | IPR005175 | - | |
| Cpe14g00855 | 261 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 30 | 182 | IPR039605 | GO:0003680 | |
| Cpe14g00855 | 261 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 | 30 | 182 | - | - | |
| Cpe14g00855 | 261 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 126 | 192 | - | - | |
| Cpe14g00855 | 261 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 | 183 | 258 | - | - | |
| Cpe14g00855 | 261 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 183 | 258 | IPR039605 | GO:0003680 | |
| Cpe14g00855 | 261 | ProSiteProfiles | PPC domain profile profile. | 124 | 261 | IPR005175 | - | |
| Cpe14g00855 | 261 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
| Cpe14g00855 | 261 | CDD | DUF296 | 128 | 195 | IPR005175 | - | |
| Cpe14g00855 | 261 | Gene3D | - | 129 | 193 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe14g00855 | Cpe15g00219 | CCT | |
| Cpe08g00488 | Cpe14g00855 | CCT | |
| Cpe13g00201 | Cpe14g00855 | CCT | |
| Cpe13g00201 | Cpe14g00855 | ECH | |
| Cpe08g00488 | Cpe14g00855 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe05g00182 | Cpe-Chr5:955937 | Cpe14g00855 | Cpe-Chr14:7073358 | 4.04E-30 | dispersed | |
| Cpe14g00855 | Cpe-Chr14:7073358 | Cpe15g00219 | Cpe-Chr15:1895199 | 6.40E-21 | dispersed | |
| Cpe13g00201 | Cpe-Chr13:1547397 | Cpe14g00855 | Cpe-Chr14:7073358 | 4.33E-55 | wgd | |
| Cpe14g00855 | Cpe-Chr14:7073358 | Cpe03g01680 | Cpe-Chr3:12807604 | 4.39E-37 | wgd | |
| Cpe14g00855 | Cpe-Chr14:7073358 | Cpe05g00281 | Cpe-Chr5:1584860 | 7.37E-58 | wgd | |
| Cpe14g00855 | Cpe-Chr14:7073358 | Cpe08g00773 | Cpe-Chr8:6170305 | 2.40E-124 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe14g00855 | - | - | csv:101205374 | 313.538 |