Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00994 ATGAAGAACTCGGAGTCTGGTAGGCATTTGCTAGTGGCTTATGCTCCTCCTCCTGATAACATTTTTCATCCAGCGAACAAAAGTACGAATAATCGACAGCAAAGGAAGAAAGTGAGAATGCGCAAGTGGTTTTGTTGTTTTTGTCAAGTTGAAGAGACAAATGAGTCAACTGAAAATGAGCACTTGAAAAGCCCCACTAATTTTGGAGATGGCCACTCAAAGGGCCCAAACGTGTCAGCGCCTGTTAAACCTGAGGCACAAAAGGCAGCACCAACAATTGAAGTGCCTGCACTCTCCCTGGATGAACTGAAAGAAAAGACAGATAATTTTGGGTCGAAAGCATTGATTGGAGAAGGATCTTATGGTAGAGTTTACTATGCAAGCTTGAATAATGGGAAAAATGTAGCTGTAAAAAAGCTCGATGTTTCCTCTGAGCCTGACAGTAACTTTGAGTTTTTGACCCAGGTTTCTACAGTATCAAGATTGAAACATGAAAATTTTGTTGAATTGCTTGGATATTGTGTTGAAGGAAATCTTCGTGTATTGGCATATGAATATGCAACCATGGGATCTTTGCATGATGTGTTACATGGAAGGAAGGGAGTACAAGGAGCACAACCTGGTCCAGTGCTCGACTGGATGCAGCGAGTGAGAATTGCAGTTGATGCTGCCAAAGGACTGGAATACTTGCATGAGAAGGTTCAACCTGCTATTATACACCGAGATATCAGGTCCAGCAATGTGCTTCTCTTTGAGGATTTTAAAGCGAAGATAGCTGATTTTAACCTCTCCAATCAAGCCCCTGATATGGCAGCCCGTCTTCATTCAACTCGAGTTTTGGGAACTTTTGGTTACCATGCTCCAGAGTATGCAATGTCTGGACAGTTGACACAGAAGAGTGATGTATACAGCTTTGGTGTAGTTCTACTTGAGCTTTTGACTGGTAGGAAACCTGTCGATCACACGATGCCCCGCGGACAGCAAAGTTTAGTTACCTGGGCTACCCCAAGGCTAAGCGAGGACAAAGTGAAGCAATGTGTAGATCCAAGACTAAAGGGAGAATACCCTCCTAAAGGAATTGCGAAGCTAGCAGCGGTGGCTGCATTGTGTGTACAGTACGAATCTGAGTTCCGACCAAATATGAGCATAGTTGTGAAAGCCCTCCAACCTCTTTTGAAGCCCCCCGCACCTACCGGTCCCCCTGCGCCTGTGTCTTGA 1218 44.58 MKNSESGRHLLVAYAPPPDNIFHPANKSTNNRQQRKKVRMRKWFCCFCQVEETNESTENEHLKSPTNFGDGHSKGPNVSAPVKPEAQKAAPTIEVPALSLDELKEKTDNFGSKALIGEGSYGRVYYASLNNGKNVAVKKLDVSSEPDSNFEFLTQVSTVSRLKHENFVELLGYCVEGNLRVLAYEYATMGSLHDVLHGRKGVQGAQPGPVLDWMQRVRIAVDAAKGLEYLHEKVQPAIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMSGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPRLKGEYPPKGIAKLAAVAALCVQYESEFRPNMSIVVKALQPLLKPPAPTGPPAPVS 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7541379 7546196 - Cp4.1LG17g10050.1 Cpe17g00994 484312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00994 405 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Cpe17g00994 405 ProSiteProfiles Protein kinase domain profile. 110 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe17g00994 405 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 26 394 - -
Cpe17g00994 405 SMART tyrkin_6 110 388 IPR020635 GO:0004713|GO:0006468
Cpe17g00994 405 Gene3D Transferase(Phosphotransferase) domain 1 188 395 - -
Cpe17g00994 405 Pfam Protein tyrosine and serine/threonine kinase 115 388 IPR001245 GO:0004672|GO:0006468
Cpe17g00994 405 CDD STKc_IRAK 116 391 - -
Cpe17g00994 405 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 26 394 - -
Cpe17g00994 405 Gene3D Phosphorylase Kinase; domain 1 81 186 - -
Cpe17g00994 405 SUPERFAMILY Protein kinase-like (PK-like) 91 388 IPR011009 -
Cpe17g00994 405 ProSitePatterns Tyrosine protein kinases specific active-site signature. 238 250 IPR008266 GO:0004672|GO:0006468
Cpe17g00994 405 MobiDBLite consensus disorder prediction 56 76 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g00093 Cpe17g00994 CCT
Cpe03g01253 Cpe17g00994 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00360 Cpe-Chr3:1916317 Cpe17g00994 Cpe-Chr17:7541379 1.53E-39 dispersed
Cpe03g01253 Cpe-Chr3:10153402 Cpe17g00994 Cpe-Chr17:7541379 1.10E-33 dispersed
Cpe08g00093 Cpe-Chr8:579297 Cpe17g00994 Cpe-Chr17:7541379 0 dispersed
Cpe08g01321 Cpe-Chr8:9489177 Cpe17g00994 Cpe-Chr17:7541379 3.29E-179 dispersed
Cpe17g00719 Cpe-Chr17:5738044 Cpe17g00994 Cpe-Chr17:7541379 7.11E-28 dispersed
Cpe17g00994 Cpe-Chr17:7541379 Cpe20g00626 Cpe-Chr20:3917624 1.42E-84 dispersed
Cpe12g00502 Cpe-Chr12:4916159 Cpe17g00994 Cpe-Chr17:7541379 5.04E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62962 PF07714 PK_Tyr_Ser-Thr 1.40E-46 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00994 K13436 - csv:101221382 652.514