Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi14g858 ATGAAGTCTCTGATATACCGAGTTCTTCGAATCGACCAGACCGGTGAAAACCTAACCCTGACCAGGTTGGATCTCTGGAATAACACTTGCCCCTCCCAGTTCGCTAATTCCACTCTCAATTTCACTATCTTCAATTACGGCATGGGTAACGAAGACCTAAACTTGTTCTATGGCTGCGATAGTGTGAAGCTAATTACGCCTTACAAACAGTTTAATTGCAATGCGAGTGGCAGTGCAAGTGGCAATTCAAGCTATGCTTATTATTTAATTGGTCCCGTTCCCGATCCGATTCTGAAAATTATTCGTTGTAATACTAGCCTTAGGATTCCGGTTCTTCAATCAGCGGCGAATAGTCTCACTGCCAATAACATCACCCTCGGCGAAGTTTTGACGGTGGGTTTCAATGTGAATTATAGTAACCCCTGTGAAGCCAAGTGTTCAGCATGTATTGCCTATGGTGCGCAATGTGGATATGACTATGATAAGGAAGAACCCATCTGTATTTGCAGTGATCGGATTTGTCATGTACGAGGGACAGGCGGTAATAATGTACCAAAAACAGTAGGCTATTCCGTATTAGGTGCAGTCCTTTTGGGCATTTTCCTTGGATGTCTCTTCTATTTTCTTGCCCAACGGCGAAGACGTGCATCCAAAGCTAAAAGCAAGGACCTCCCTACTCCTCCTTCAAGCAAAGGCATTGCACCATCCTTAACTGGTTTCTCTGAGAGCATCCCCTCTTATCCCTATACAAAGTCTGACATTGAAAAGGGGAGCACCTACTTTGGAGTTCAGGTCTTCAGTTACATGGAACTTGAAGAAGCCACTAACAATTTCGACCCATCTAGAGAACTTGGAGATGGAGGATTTGGCACTGTTTACTACGGTAAACTACAAGATGGGCGTGTAGTTGCAGTTAAGCGCCTATATGAGAATAATTTCAAACGTGTTGAACAGTTCATGAACGAAGTTCAGATCCTAACTCGTTTACAACATCAAAACCTCGTGAAGTTGTATGGGTGCACCTCAAGGCGAAGCCGAGAACTCCTCCTTGTTTACGAATATATTCCTAATGGAACTGTGGCAGATCATCTTCACGTCAGAAATCATACACCGTGA 1116 43.82 MKSLIYRVLRIDQTGENLTLTRLDLWNNTCPSQFANSTLNFTIFNYGMGNEDLNLFYGCDSVKLITPYKQFNCNASGSASGNSSYAYYLIGPVPDPILKIIRCNTSLRIPVLQSAANSLTANNITLGEVLTVGFNVNYSNPCEAKCSACIAYGAQCGYDYDKEEPICICSDRICHVRGTGGNNVPKTVGYSVLGAVLLGIFLGCLFYFLAQRRRRASKAKSKDLPTPPSSKGIAPSLTGFSESIPSYPYTKSDIEKGSTYFGVQVFSYMELEEATNNFDPSRELGDGGFGTVYYGKLQDGRVVAVKRLYENNFKRVEQFMNEVQILTRLQHQNLVKLYGCTSRRSRELLLVYEYIPNGTVADHLHVRNHTP* 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 20429727 20435382 + Vvi14g858 Vvi14g858 775925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi14g858 371 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 3 368 - -
Vvi14g858 371 Pfam Wall-associated receptor kinase C-terminal 100 171 IPR032872 -
Vvi14g858 371 ProSitePatterns Protein kinases ATP-binding region signature. 284 306 IPR017441 GO:0005524
Vvi14g858 371 Pfam Protein tyrosine and serine/threonine kinase 281 367 IPR001245 GO:0004672|GO:0006468
Vvi14g858 371 ProSiteProfiles Protein kinase domain profile. 278 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi14g858 371 Gene3D Phosphorylase Kinase; domain 1 250 354 - -
Vvi14g858 371 SUPERFAMILY Protein kinase-like (PK-like) 244 369 IPR011009 -
Vvi14g858 371 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 368 IPR044652 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi14g858 Vvi17g289 ECH
Vvi1g347 Vvi14g858 ECH
Vvi1g348 Vvi14g858 ECH
Vvi14g858 Vvi17g288 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76231 PF07714 PK_Tyr_Ser-Thr 1.80E-16 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi14g858 - - oeu:111385488 419.083