Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g669 ATGTCCTCTCACATCACCAAACCTCCGTTCTCCTCCATTGTTAAGCCGCTCGCTGAAACTCTATTCACTGAGCAGGATCACAACGCGCAGATCGGCGCCTCGTTGTGCCTCGCTTCGGCGATCGACGCTGCGCCGGATCCGGATCCTGCACTGTTGCGAAGGCTGTTGCCGAGGATCGAGAAGCTCCTGAAGTGTGATAGCTTCAAAGCGAAGCCGGCGGTTTTGACTCTAATTGGAAGCATTGTCGAAGCCGGTGGTGCGACGAGTTACAATGTGGTGAAGAATTTGGTGCCTTGTGCGGTGGGATTTTTGAGCAGTGAGGACTGGGCGGCAAGGAAGGCGGCGGCAGAGGTTCTTGTGAAGCTGGCTGTGATGGAGAGAGATATGTTGTCGGAGTTCAAGTCTTCTTGTCTGAAGACATTTGAGGCTCGAAGATTCGACAAGGTGAAGGCTGTGAGAGATACTATGAATCAGATGTTGGGAGCTTGGAAGGAGATTCCTGATGTTTCCAATGATGTCTCGCCACCGCCGCAATCACAATCATCTTCCAAAGAGAATGCAAGTGATGGGCGCTACCCACTTGAGTCCAGAAATTCTTGCACTGGTGGCTCTGAAGTGCCTCTGATGAGGAAGAAATCCATTCCAACCAGTATATCGCCTCAGCTCAATAGTTCATCTGCAACCACTGTGAGGAGGAGAGGTCCTGTAGATAAATCAGGTTCAGCAATGTTCCGGAAGCTGGAGCGTAAGAAGGCTTCTGATTTGAAAGTGGAAGTTACTGCTCCTCATGCTCCCTCTGTCATGAGGATTCATGAGGATGGCCTTAAGAAGAAAGATGAGAAAGCTCCAGAAAGAGGGGAGAATGAGAAAAATAGGTTCACAAAGCCAGAAACAAGGCGAGTCCTCTTCACTAAGAATTCAGATGACAAGATGAATAAGTTTGGTGGATTCAGGTCCGGATCTCGTGTGGTTCCATGTCAAGAGGAGAATTCTGAGACTACTGTTGAAGTGAGTAACACAACTGAGGTTCCGCATAGAAACCATAAAGAGTGTGAGGATCTATCTCTGATCCGTAAGCAGCTTGTTCAGATTGAAAACCAGCAATCCAGTCTGCTAAATCTCCTCGAGAAATTCATGGGAAGCTCCCAGAATGGATTGAGATCCCTGGAGACACGTGTTCATGGCCTAGAGCTCGCATTGGACGAGATCTCATTTGACTTGGCTGTGTCAAACAGAAGGATGTCAAGCACAGACACTGCAGGAGCCACATGCTGCATGCTACCTGGTGCTGATTTTCTGAGCTCCAAGTTTTGGAGGAAAACAGAAGGCCGGGGATCAACATCAAGGTTTTCTCCTTCTCATGCCACTCAATCAGGCACTGCCATGCGCTACATAGCTGGAAAGAATGACAATGCTGGAACATTCAAGTCGGAGAACCTAAGGTTTCGGCTCCAGGGTGGTGGTGGATTTGTTGTGAATCCATTGGCCGAGATTCCCAGTGATTCAAGGGATATTTCAGAAGTCTCGTCAAATAGAATTTCAAAGAATGCTCACGAGACTGCCTAG 1566 48.6 MSSHITKPPFSSIVKPLAETLFTEQDHNAQIGASLCLASAIDAAPDPDPALLRRLLPRIEKLLKCDSFKAKPAVLTLIGSIVEAGGATSYNVVKNLVPCAVGFLSSEDWAARKAAAEVLVKLAVMERDMLSEFKSSCLKTFEARRFDKVKAVRDTMNQMLGAWKEIPDVSNDVSPPPQSQSSSKENASDGRYPLESRNSCTGGSEVPLMRKKSIPTSISPQLNSSSATTVRRRGPVDKSGSAMFRKLERKKASDLKVEVTAPHAPSVMRIHEDGLKKKDEKAPERGENEKNRFTKPETRRVLFTKNSDDKMNKFGGFRSGSRVVPCQEENSETTVEVSNTTEVPHRNHKECEDLSLIRKQLVQIENQQSSLLNLLEKFMGSSQNGLRSLETRVHGLELALDEISFDLAVSNRRMSSTDTAGATCCMLPGADFLSSKFWRKTEGRGSTSRFSPSHATQSGTAMRYIAGKNDNAGTFKSENLRFRLQGGGGFVVNPLAEIPSDSRDISEVSSNRISKNAHETA* 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8408075 8412077 + Vvi17g669 Vvi17g669 779366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g669 521 MobiDBLite consensus disorder prediction 166 242 - -
Vvi17g669 521 MobiDBLite consensus disorder prediction 214 232 - -
Vvi17g669 521 MobiDBLite consensus disorder prediction 501 521 - -
Vvi17g669 521 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 1 510 IPR033337 GO:0005874|GO:0008017
Vvi17g669 521 MobiDBLite consensus disorder prediction 503 521 - -
Vvi17g669 521 MobiDBLite consensus disorder prediction 172 203 - -
Vvi17g669 521 Gene3D - 1 278 IPR011989 -
Vvi17g669 521 SUPERFAMILY ARM repeat 3 386 IPR016024 -
Vvi17g669 521 PANTHER TORTIFOLIA1-LIKE PROTEIN 3 1 510 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g2 Vvi17g669 ECH
Vvi1g803 Vvi17g669 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g669 - - vvi:100263859 956.822