Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g347 ATGCTTTTGTTGTTGAATTGGGGATTTCGCATGGGTTCTGTTTCTTTTCTTGTTCTATTTCTTCTCTCTCATTCTGTGCTTCTTTCCTCTGCTGAAGAAGAAAGGAAACAGCCTCCAACTTGTCCACCCTTTCACTGTGAAAAACTGGGCTGGCTTCACTTTCCCTTCAACAACGAAACAAACCCAGAATGCGGTTTTTGCACAGTAACAAGATGTACTGAAGGGCTTCCACGGATCCAACTGGAAAGGGAAGGAAGATATTTTGGGGTGAAAAACATCTCTCAGGCTGATACCATAGTAATTCAAGATAAGCGGCTTCAAGAGAACTTGCAACGCGGCATATGTGAATTCATTGATAACTTAACTCGTTTCCGTTCTCCTTCTGTTTCTTTCAAACCAGTACCCCCTCTAGCCGAACTAACCCTGTTCAAATGCCACCGTAATCTCAATATTGATCTTACTACAGATCATAATTATACCGATTGTCAAGACTACATCATCCACTATAATCATCCAAATCATACTTCCATTCCTCCACCTCTACCTCATAATCAACCAAACCATACTCCCACTCTTCCACCTCCAGCTCCACTGGACTGTTCTATTATTCAGTATCCAATAAACATGAGTTTAGGAATGGACAACCTGGTTGCCCTGTTGACTTCTGATATCACTCTTGAAGTGCATCTGTCCCGTGAATGTCGGAAGTGTCACTCTAGTGGAGGCCAATGTCGAGATGACGAGGGAAAATTCCGGTGTGCACATACAGGGAATGACAAGCGACTGAAGCTAGCCCTAGGATTAGGTATCAGTGCCGGAAGCATTACCATCTTAATAATTTGTTTCTTTATCATCTGGCAGAGCCATAAGAGGAAGTACGCTCCAACTTTCCTCTCAAGAAACACTTGTTCAGATCCCTCTTCAAAATCAGAGTTGGAAATAACGGGGGCGTATTTTGGCATCCCCATTTTTCCCTACACTGAACTTGAAGAAGCCACTAATTATTTTGACCCTGATAGAGAAATTGGAGATGGAGGTTTTGGAACTGTATACCATGGACAACTGCGAGATGGGCGAGAGGTTGCTGTCAAGCGCCTATACGAGAACAATCACAGGCGGGTTGAACAGTTCATGAATGAAGTTCAAATCCTCACTCGTTTGCGCCACCGGAATCTTGTCTCCCTTTACGGCTGCACCTCACGCCACAGCCGTGAACTCCTTCTGGTTTACGAATTTATTCCCAATGGCACAGTCGCTGATCATCTCCACGGGGATCGAGCAGATTCAGGCTTACTCACATGGCCTATCCGATTGAGTATTGCCATAGAAACTGCCACTGCATTATGTTATCTCCATGCTTCTGATGTTGTACACCGGGACGTGAAAACTAAGAACATTCTCCTGGACGATAGTTTCTGTGTTAAAGTCGCAGATTTCGGGCTTTCACGACTCTTCCCGACCGATGTTACCCATGTCTCAACCGCTCCACAAGGGACTCCCGGCTATGTTGATCCAGAATATCACCAATGTTACCAGCTTACAGATAAGAGCGATGTTTACAGCTTTGGGGTTGTCCTTATTGAGCTCATATCATCACTGCCTGCTGTAGACATTAATAGGCATAGGCATGAGATCAATTTGTCTAACTACGCTATAAACAAGATACAAAAATGCGCATTTCACGAGCTGATAGACCCACGTCTTGGATTTGATTCAGATCTTGCGGTTAATAGGATGACTACTCTGGTGGCAGAATTGGCCTTTCGCTGTCTGCAACCTGATAAGGAAATGAGGCCTTCCATGGATGAAGTCTTGGAGATTTTGAAGGAAATTGAGAGTGACAAGCATGAATCGGAGAACATGGACATAGCAACCGACAGTGTTGGATCGTCGATGCATGAGCCACCGCTTCCACCTTCACCAGATTGTGATGAAGTGGGGTTGTTGAAAAGTGTCCAGCTGATGCCATCACTAGATACTGTGACCGCTCAATGGCCCAGTAGGTCTACTACACCAAGCGCCACAGATACAGAAGAGAAAACATGGCTTAAAGGGAGAGGAAGATTACCCTGTTGCCGTCGGTTTGGTGCCATGCTTTTGTTGTTGAATTGGGGATTTCGCATGGGATCTGTTTCTTTTCTTGTTCTAGTTATTCTCTCTCATTCTGTGCTTCTTTCTTCTTCAGGAAAAGAAGGGAAACACCCTCCAAATTGTTCATTCTTCCAATGTGGAAAACTGGGCTGGCTTAAATTTCCCTTCAACAATGAAACAAATCCAGAATGCGGATTGCGTACAATAGTAAATTGCACTGAAGAGGCTCCGAAGATCCAACTGGAAAGGGGAGGAAGACATTTTGAGGTGAAAAACATCCAGGGTGATACCATAATAATTCAAGATGAGCAGCTTCAAGAGCACTTGAAACATGGCAGATGTGACTTCATCGACAACTTAACTTCTTCCCCTTCTCCTTCTGTTTTTTTCACACCAGTACCCACCCTAACCGAACTAACCCTGTTTAAATGCCACCGTAGTCACAATATTGATCTTATTACAGAGTATAATTATACCAGATGTCAAGACTACATTATCCACTATAATCATTCAAATCATATTCCTCCAACTCCACCTCCACCTGGCTGTTCAATTATTCAGTATCCAGTAAACATGAGTACTGTAGGTATCGCTAAACTGGATTCCCTGTTGACTCCTGATATCACTCTTGAAGTGAATGTGTTCTCACACTGTTGGAATTGTCTCAATAGAGGAGGCCAATGCCAAGATGATGAAAAGGGAAAATTCCAGTGTGCACATGTGAAAGGGAATGACAATCGATTGAAGCTAGCCCTAGGATCAGGTATCAGCGCCGGAGGCATTACCATCTTAATAATTTGTTTCATCATCCGACAGCGCCATAAAAGGAAGTATGCTTCAACTTTCCTCTCAAGGAACACTTCTTCAGATCCCTCTTCACAACCAGGATTGGAAACAACGGGGACGTATTTTGGCATCCCCATTTTCCCCTACAGTGAACTTGAAGAAGCCACTTATCATTTTGTCCCTGATAGAGAAATTGGAGATGGAGGTTTTGGAACTGTATACCATGGACAACTGCGAGATGGGCGAGAGGTTGCCGTCAAGCGCCTATACGAGAACAATTACAGGCGGGTTGAACAGTTCATGAATGAAGTTCAAATCCTCACTCGTTTGCGCCACCGGAATCTTGTCTCCCTTTACGGCTGCACCTCACGCCACAGCCGTGAACTCCTTCTGGTTTACGAATTTATTCCCAATGGAACAGTCGCTGATCATCTCCACGGGAATCGAGCAGATTCAGGCTTACTCACATGGCCTATCCGATTGAGTATTGCCATAGAAACTGCCAGCGCATTATGTTATCTCCATGCTTCTGATGTTGTACACCGGGACGTGAAAACTAAGAACATTCTCCTGGATAATAGTTTCTGCGTTAAAGTCGCAGATTTCGGGCTTTCACGACTCTTCCCCACTGATGTTACCCATGTCTCAACCGCTCCACAGGGAACTCCCGGCTATGTTGATCCAGAATATCACCTATGTCACCAGCTTACCGACAAGAGCGATGTTTACAGCTTCGGGGTTGTCCTTATTGAACTCATATCATCACTGCCTGCTGTAGACTTTAGTAGGCTTAAGCATGAGATCAATTTGTCTAACTACGCTATAAACAAGATACAAAAATGTGCATTTCACGAGCTGATTGACCCACATCTTGGATTCAATTCAGATCTTGCGGTTAATAGGATGACTACTCTGGTAGCAGAATTAGCCTTTCGCTGTCTGCAACCTGACAAGGAAATGAGGCCTTCCATGGATGAAGTTTTGGAGATTTTGAAGGAAATTGAGAGTAACAGGCATGAATTGGAGAACATGGACGCAGCAGCGGACAGTGTTGGATCATCGATGCGTGAGCCGCCGCCACCTTCACCAGATTGTGATGAAGTGGGGTTGTTGAAAAGCGTCCAGCTGATGCCATCACCAGATAGTACGACCGCTCAATGGGCCAGTAGGTCTACTACACCAAGCGCCATTCCGTTATGTCTCAACAGGGAAGCATTGATTAGCTCTTAA 4107 44.58 MLLLLNWGFRMGSVSFLVLFLLSHSVLLSSAEEERKQPPTCPPFHCEKLGWLHFPFNNETNPECGFCTVTRCTEGLPRIQLEREGRYFGVKNISQADTIVIQDKRLQENLQRGICEFIDNLTRFRSPSVSFKPVPPLAELTLFKCHRNLNIDLTTDHNYTDCQDYIIHYNHPNHTSIPPPLPHNQPNHTPTLPPPAPLDCSIIQYPINMSLGMDNLVALLTSDITLEVHLSRECRKCHSSGGQCRDDEGKFRCAHTGNDKRLKLALGLGISAGSITILIICFFIIWQSHKRKYAPTFLSRNTCSDPSSKSELEITGAYFGIPIFPYTELEEATNYFDPDREIGDGGFGTVYHGQLRDGREVAVKRLYENNHRRVEQFMNEVQILTRLRHRNLVSLYGCTSRHSRELLLVYEFIPNGTVADHLHGDRADSGLLTWPIRLSIAIETATALCYLHASDVVHRDVKTKNILLDDSFCVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSLPAVDINRHRHEINLSNYAINKIQKCAFHELIDPRLGFDSDLAVNRMTTLVAELAFRCLQPDKEMRPSMDEVLEILKEIESDKHESENMDIATDSVGSSMHEPPLPPSPDCDEVGLLKSVQLMPSLDTVTAQWPSRSTTPSATDTEEKTWLKGRGRLPCCRRFGAMLLLLNWGFRMGSVSFLVLVILSHSVLLSSSGKEGKHPPNCSFFQCGKLGWLKFPFNNETNPECGLRTIVNCTEEAPKIQLERGGRHFEVKNIQGDTIIIQDEQLQEHLKHGRCDFIDNLTSSPSPSVFFTPVPTLTELTLFKCHRSHNIDLITEYNYTRCQDYIIHYNHSNHIPPTPPPPGCSIIQYPVNMSTVGIAKLDSLLTPDITLEVNVFSHCWNCLNRGGQCQDDEKGKFQCAHVKGNDNRLKLALGSGISAGGITILIICFIIRQRHKRKYASTFLSRNTSSDPSSQPGLETTGTYFGIPIFPYSELEEATYHFVPDREIGDGGFGTVYHGQLRDGREVAVKRLYENNYRRVEQFMNEVQILTRLRHRNLVSLYGCTSRHSRELLLVYEFIPNGTVADHLHGNRADSGLLTWPIRLSIAIETASALCYLHASDVVHRDVKTKNILLDNSFCVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYHLCHQLTDKSDVYSFGVVLIELISSLPAVDFSRLKHEINLSNYAINKIQKCAFHELIDPHLGFNSDLAVNRMTTLVAELAFRCLQPDKEMRPSMDEVLEILKEIESNRHELENMDAAADSVGSSMREPPPPSPDCDEVGLLKSVQLMPSPDSTTAQWASRSTTPSAIPLCLNREALISS* 1369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3595151 3609449 - Vvi1g347 Vvi1g347 769547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g347 1368 CDD STKc_IRAK 342 611 - -
Vvi1g347 1368 Coils Coil 601 621 - -
Vvi1g347 1368 ProSiteProfiles Protein kinase domain profile. 1018 1301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g347 1368 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 665 - -
Vvi1g347 1368 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 717 1348 - -
Vvi1g347 1368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1138 1150 IPR008271 GO:0004672|GO:0006468
Vvi1g347 1368 Gene3D Transferase(Phosphotransferase) domain 1 413 625 - -
Vvi1g347 1368 Gene3D Transferase(Phosphotransferase) domain 1 1095 1307 - -
Vvi1g347 1368 Coils Coil 1283 1303 - -
Vvi1g347 1368 Pfam Protein tyrosine and serine/threonine kinase 339 607 IPR001245 GO:0004672|GO:0006468
Vvi1g347 1368 Pfam Protein tyrosine and serine/threonine kinase 1021 1289 IPR001245 GO:0004672|GO:0006468
Vvi1g347 1368 SUPERFAMILY Protein kinase-like (PK-like) 994 1290 IPR011009 -
Vvi1g347 1368 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g347 1368 SMART serkin_6 1018 1289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g347 1368 SUPERFAMILY Protein kinase-like (PK-like) 311 608 IPR011009 -
Vvi1g347 1368 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 665 IPR044652 -
Vvi1g347 1368 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 717 1348 IPR044652 -
Vvi1g347 1368 ProSitePatterns Protein kinases ATP-binding region signature. 1024 1046 IPR017441 GO:0005524
Vvi1g347 1368 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Vvi1g347 1368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Vvi1g347 1368 Gene3D Phosphorylase Kinase; domain 1 995 1094 - -
Vvi1g347 1368 Gene3D Phosphorylase Kinase; domain 1 309 412 - -
Vvi1g347 1368 ProSiteProfiles Protein kinase domain profile. 336 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g347 Vvi17g289 ECH
Vvi1g347 Vvi14g858 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76502 PF07714 PK_Tyr_Ser-Thr 1.30E-46 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g347 - - vvi:100259351 1345.49