Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g803 ATGTTGCGAATGATAATTCCCCGCGAGCCTCTCTCGGACAAAACCGTCTCAACTCGTGATCTGAAGCACCGAGTCATCACCTGCCTCAACAAGCTCTCCGACCGGGACACCCTCGCTGTCGGGACGGCCGAGCTCGAATCCATCGCTCGGAATCTCACGCACGATTCCTTCTCTCCCTTCCTCTCATGCCTCTATGGTACCGATTCCTCCGAGAAATCGCCTGTAAGGAAGCAATGCGTTCGTCTCTTAGGTGTGCTCTCGGAGACTCACGGCGACTCTCTCTCTCCTCACCTCTCCAAAATGCTATCCAACGTCGTTCGTCGCCTTCGTGACTCCGATTCCGCCGTCCGATTGGCCTGCGTTGACGCCGTCGGTGTTATGTCGTCGCAGATCACGAAACCACCATTTTCCGCATTTTTGAAGCCCTTGACTGATTCAATATTGCTTGAGCAAGATTATAATTTGCAAATCGGTTCCGCGCTTTGCATTGCGGCAGCGATCGAGGCCGCGCCCGATCCAGAGCCGGAGCAGCTGCTGAAGCTCCTGCCGAGGCTACTGAAGTTAGCAAAGAGCGAGAGCTTCAGAGCGAAGCCGGCATTGTTGTCGCTCATCGGTAGCATTATTGGTGCCGGTGGGGCGTCCACTCGTGGTGTGTTGAATAGTCTGGTTCCGTGCTTGGTTGAGTTTTTGAGTAGTGAGGACTGGGCAGCGAGGAAGGCTTCGGCGGAGGCGTTGGCTAGATTAGCTCTCGTGGAGAGAGATTTGGCAACCGAGTTCAAGTCCTCGTCTTTGTCTTCTTTGGAGAGTCGGAGATTTGATAAGGTCAAGGTGGTCAGGGACACTATGAATCGCACCTTGGATTTGTGGAAGGAGCTTCCATGTGACTCCAACGGTCTCTTGCCCCTGTCTCCATCTAAAGCTTCTTCAAAAGATAATGGTGCTGGTGGATGCTTCCCTCCTGCCTCCAAAATTTCCTGTGATGTTGGTTTTGAGACTCCTCAGCCAAAGAAAATAATCCCCACAAGATCACCTCCATCAGATAATTCATTAGTAACCACTGCGAGAAAGAGAAGCCCTTTACAGAGTAGTAATAATGGGAAATCGACTACTGCAATGTTCCGTAAGCTAGACTGCAAGAAACCCTCTGATTGGAAAGTTGAAGTTGCTGTTCCCCATCCATCCTCTTCAAAAGTGGCTTGTGAAGATGATCTTAAAAGGAGGTACTTGGTAGTTTCAGATTCGGAGGAGAATGGAAACTGCGGGGATTCAAGACCAGAAACAAACCGTGTCCTCTTTAGTAAGATCAGTAATGAAAAAATGCATAAATTTGGTTGCTTGAGATCTGGGTCTCGCATTGTCCCCTTTCATGAGAATAATAATTCTGAGTCAGCTGTCGTGGATAGCAATGCTACTGAAGAAGAAATCTATGAAAACCAAAAGGACATAGAGGATCTGTCTTTGATTCGCAAACAGCTTATCCAGATTGAGAACCAGCAATCCAGTATGTTAAATCTCCTCCAGAGGTTTATTGGCAACTCCCAAAGTGGGATAAACTCTCTGGAGACCCGTGTAAATGGCCTGGAGATGGTACTGGAGGAAATATCATTTGATTTGGCAATATCAAGTGGAAGGGTATCAAACTCTGATTCTGCAGGGAACACATGTTGCAAGCTGCCCGGAGCAGAATTCTTGAGTTCTAAGTTTTGGAAGAGAACAGAAGGCCATACGACTTCAAGATTCTCTTCTACTGGCAGCATCCAAGCATTAACTACCATAAATAATATGCCCAATAAATATGCCAGCAATATGGTAGATGAACAAAAGCTTCAGCACCAAAATTTGGATGGATTTGTTGCAAATCCATTAGCTGATATTCATGGCACTTCAAGAACTCTAATTGATGGGGCATCTCCAGCTACTCAAACAATGCCAGTGAACCTTAGCCGCAGATTAGCTGCATAG 1962 47.55 MLRMIIPREPLSDKTVSTRDLKHRVITCLNKLSDRDTLAVGTAELESIARNLTHDSFSPFLSCLYGTDSSEKSPVRKQCVRLLGVLSETHGDSLSPHLSKMLSNVVRRLRDSDSAVRLACVDAVGVMSSQITKPPFSAFLKPLTDSILLEQDYNLQIGSALCIAAAIEAAPDPEPEQLLKLLPRLLKLAKSESFRAKPALLSLIGSIIGAGGASTRGVLNSLVPCLVEFLSSEDWAARKASAEALARLALVERDLATEFKSSSLSSLESRRFDKVKVVRDTMNRTLDLWKELPCDSNGLLPLSPSKASSKDNGAGGCFPPASKISCDVGFETPQPKKIIPTRSPPSDNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVPHPSSSKVACEDDLKRRYLVVSDSEENGNCGDSRPETNRVLFSKISNEKMHKFGCLRSGSRIVPFHENNNSESAVVDSNATEEEIYENQKDIEDLSLIRKQLIQIENQQSSMLNLLQRFIGNSQSGINSLETRVNGLEMVLEEISFDLAISSGRVSNSDSAGNTCCKLPGAEFLSSKFWKRTEGHTTSRFSSTGSIQALTTINNMPNKYASNMVDEQKLQHQNLDGFVANPLADIHGTSRTLIDGASPATQTMPVNLSRRLAA* 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9978810 9987365 + Vvi1g803 Vvi1g803 770003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g803 653 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 13 632 IPR033337 GO:0005874|GO:0008017
Vvi1g803 653 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 13 632 - -
Vvi1g803 653 SUPERFAMILY ARM repeat 41 279 IPR016024 -
Vvi1g803 653 MobiDBLite consensus disorder prediction 341 371 - -
Vvi1g803 653 Gene3D - 14 314 IPR011989 -
Vvi1g803 653 MobiDBLite consensus disorder prediction 333 372 - -
Vvi1g803 653 Pfam HEAT repeat 222 249 IPR000357 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g803 Vvi17g669 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g803 - - vvi:100260313 1186.4