Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00500 ATGCAATTTTCCTCTCACCTTCCTTCTCCATTATCAGCCATGGCTTTCCACTCAGCCTTCTTTCTTCTTCTGTTCTTCACTTCCTCCATGGCTTCTTCTCAAGCTCTTACTGCCGCCATAGCCAACCAGTCCCAGTTCTTCCTTCTCATGCAAACAACTGCCTCAGGTGACCTCCTCTCCAATTGGGATCTTTCACAAGGAAAATCCTTCTGCAACTTCACTGGAATCCGCTGCAATGACCGTGGTCACGTCGTTCGGATCGATATCTCCGGCCACCCTCTCTCCGGTACCTTCCCGGACGATGTATGCTCTTACCTGCCATCACTCAGAGTTCTTCGCCTCGCTGATACCGGATTGTCGGGGCGTTTTCCCTCAGGAATCACCAACTGCTCTCTCATTCAAGAGCTTGACTTGAGTTCTCTATATCTCAATGGAACAATCCCGGACTTATCGCAAATGAAACAACTCCGTGTACTCGAACTCTCCTACAATTCGTTCACCGGAGATTTCCCCATGTCGGTTTTCGACCTTGTTAATCTCGAGATACTGAATTTCAACGAGAATTATAATCTCAACTTATGGAAATTACCTGAGAAGATCTCTAGATTGAAGAAGCTGAAATCTATGGTGTTGACAACATGTATGTTGGATGGAGAAATCCCTCGATCGATCGGGAATATGACGTCGCTTATTGATCTCGAACTAAGTGGGAACTTTCTCAAGGGAGAGATTCCAAAAGAAATCTCCTTGCTCAAGAACCTGCAACAACTTGAACTCTATTACAATGAACTCACAGGAAACATACCAGAAGAGCTCGGAAATCTAACCGAGCTCGTCGACGTCGACATGTCGGTGAACCTTTTGACAGGGGAGATTCCGGAATCTATATGCAAACTCCCTAAGCTTAAAGTTCTACAGATTTACAACAATAGCCTAACAGGAGAGATTCCAAGTGTATTAGCTAACTCAACAACACTAACTATGCTATCACTTTATGACAATTTTCTTACAGGACAGATTCCACAAAAGTTGGGGAAGTTCTCACCTATGGTCGTCGTCGACTTGTCGGAGAATCGCCTGTCGGGGGCATTGCCATTGGATATATGCAGAGGAGGGGAATTGCTCTACTTTCTTGTTCTTCAAAACAGCCTTTCCGGAGAAATTCCGGCGAGTTTTGCTGAATGCCGGTCACTTTTAAGGTTTAGAATTAGTTTCAATCAGCTGGTCGGAGCAATTCCTGAAGGTGTTCTTGGTCTCCCCCATGTTTCAATCATTGATGTTGCTCATAATAACCTCACTGAATATGCATATTCATCGAAGGAGACAACGAAGAGCGACGTGTATAGCTTTGGGGTGGTGTTAATGGAGCTGATCACCGGGAAGACGCCGATTGCGGCGGAGTACGGCGAGAACAAGAACATTGTGTTCTGGGTTTCGAATAAAATGGACACAAAAGAAGGGGTTCTTGAGATTCTTGACAAGAGATTAAAAGGGTTGTTCATGGATGAGATGATTAAGGCCTTGAGGATCGCCATTCGCTGCACTTACAAGAATCCAGCGCTCCGACCCGCCATGGGAGAGGTGGTTCAGCTTCTCCAAGAGGTCAAAAAGGGCGAAGATACGTATGATGTCACTCAAATAAAGTACCCTTTTTGA 1656 45.35 MQFSSHLPSPLSAMAFHSAFFLLLFFTSSMASSQALTAAIANQSQFFLLMQTTASGDLLSNWDLSQGKSFCNFTGIRCNDRGHVVRIDISGHPLSGTFPDDVCSYLPSLRVLRLADTGLSGRFPSGITNCSLIQELDLSSLYLNGTIPDLSQMKQLRVLELSYNSFTGDFPMSVFDLVNLEILNFNENYNLNLWKLPEKISRLKKLKSMVLTTCMLDGEIPRSIGNMTSLIDLELSGNFLKGEIPKEISLLKNLQQLELYYNELTGNIPEELGNLTELVDVDMSVNLLTGEIPESICKLPKLKVLQIYNNSLTGEIPSVLANSTTLTMLSLYDNFLTGQIPQKLGKFSPMVVVDLSENRLSGALPLDICRGGELLYFLVLQNSLSGEIPASFAECRSLLRFRISFNQLVGAIPEGVLGLPHVSIIDVAHNNLTEYAYSSKETTKSDVYSFGVVLMELITGKTPIAAEYGENKNIVFWVSNKMDTKEGVLEILDKRLKGLFMDEMIKALRIAIRCTYKNPALRPAMGEVVQLLQEVKKGEDTYDVTQIKYPF 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2919597 2923765 + Cp4.1LG11g05010.1 Cpe11g00500 477294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00500 551 SUPERFAMILY Protein kinase-like (PK-like) 434 541 IPR011009 -
Cpe11g00500 551 Gene3D Ribonuclease Inhibitor 45 191 IPR032675 -
Cpe11g00500 551 Gene3D Ribonuclease Inhibitor 351 433 IPR032675 -
Cpe11g00500 551 Gene3D Ribonuclease Inhibitor 195 350 IPR032675 -
Cpe11g00500 551 Pfam Protein tyrosine and serine/threonine kinase 436 531 IPR001245 GO:0004672|GO:0006468
Cpe11g00500 551 Pfam Leucine rich repeat N-terminal domain 54 79 IPR013210 -
Cpe11g00500 551 SUPERFAMILY L domain-like 78 437 - -
Cpe11g00500 551 Gene3D Transferase(Phosphotransferase) domain 1 436 548 - -
Cpe11g00500 551 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 434 536 - -
Cpe11g00500 551 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 20 433 - -
Cpe11g00500 551 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 434 536 - -
Cpe11g00500 551 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 433 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe06g00472 Cpe11g00500 CCT
Cpe07g00194 Cpe11g00500 CCT
Cpe02g00496 Cpe11g00500 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00473 Cpe-Chr6:2792097 Cpe11g00500 Cpe-Chr11:2919597 1.31E-23 dispersed
Cpe10g00174 Cpe-Chr10:1032082 Cpe11g00500 Cpe-Chr11:2919597 2.89E-16 dispersed
Cpe11g00500 Cpe-Chr11:2919597 Cpe01g02151 Cpe-Chr1:18099141 3.04E-50 dispersed
Cpe11g00500 Cpe-Chr11:2919597 Cpe15g00410 Cpe-Chr15:5252990 6.51E-25 wgd
Cpe11g00500 Cpe-Chr11:2919597 Cpe19g00710 Cpe-Chr19:5545685 1.46E-70 wgd
Cpe11g00500 Cpe-Chr11:2919597 Cpe06g00472 Cpe-Chr6:2787761 1.97E-13 wgd
Cpe11g00500 Cpe-Chr11:2919597 Cpe07g00194 Cpe-Chr7:1225364 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62707 PF07714 PK_Tyr_Ser-Thr 2.40E-06 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00500 - - csv:101220145 714.916