Doc-Alignment

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Cucurbitales genomes. We used V.vinifera as a reference, and by comparing homologous gene locus maps and Ks values between V.vinifera and other Cucurbitales, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We created a hierarchical lists of homologous genes using V.vinifera as a reference.
  The relevant gene ids can be obtained from the Cucurbitales blast and match under the Tools module. This link is Cucurbitales blast and match.

Orthogroup analysis platform
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Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g549 Blo01g00115 . . Bda08g00247 . Bpe14g01208 . . . . . . . . . . . . . . . . . . Cla06g00606 Cam06g0644 Cec06g0647 Cco06g0650 Clacu06g0631 Cmu06g0625 Cre06g1392 . . Cone7ag0274 Cone4ag0267 . Csa02g01131 Chy05g00389 . Blo02g00522 . . . Bpe05g00889 . . . . . . Cma08g01128 . Car08g01009 . . Cpe17g00160 . . . . . . . . . . . . . . Lsi09g01299 . . .
Vvi5g550 . . . Bda08g00248 . Bpe14g01209 . Bma05g01098 Cmo08g01101 Cmo17g00206 Cma06g01375 Cma14g01743 Car06g01189 Car14g01571 Sed02g1340 Cpe08g00281 Cpe03g01461 Bhi01g00764 Tan10g0794 Cmetu06g0329 Lac12g2255 Hepe05g1583 . Lcy11g1578 Cla06g00607 Cam06g0645 Cec06g0648 Cco06g0651 Clacu06g0632 Cmu06g0626 Cre06g1393 Cone14ag0870 . Cone7ag0275 Cone4ag0268 Lsi05g01634 Csa02g01130 Chy05g00388 Cme06g00578 Blo02g00521 Blo07g00231 Bda11g00595 Bda13g00103 Bpe05g00888 Bpe13g00590 Bma02g00825 Bma06g01569 . Cmo06g01387 Cmo14g01780 Cma08g01127 Cma17g00213 Car08g01008 Car17g00189 Cpe12g00181 Cpe17g00161 . . . . . . . Cla05g00512 Cam05g0563 Cec05g0575 Cco05g0573 Clacu05g0560 Cmu05g0531 Cre05g0600 Lsi09g01298 Csa03g01294 Chy06g00549 Cme05g00481
Vvi5g551 . Blo12g00338 Bda03g00871 . Bpe04g00816 . Bma04g00766 . . Cmo17g00205 . . . . . . . . . . . . . . Cla06g00608 Cam06g0646 Cec06g0649 Cco06g0652 Clacu06g0633 Cmu06g0627 Cre06g1394 . . . . . Csa02g01129 Chy05g00387 . . . . . . . . . . . . . Cma17g00212 . Car17g00188 Cpe12g00180 . . . . . . . . . . . . . . . Lsi09g01297 . . Cme05g00483
Vvi5g552 . . . . . Bpe14g01210 . . . Cmo17g00204 . . . . . . . . . . . . . . Cla06g00609 Cam06g0647 Cec06g0650 Cco06g0653 Clacu06g0634 Cmu06g0628 Cre06g1395 . . . . . Csa02g01128 Chy05g00386 . Blo02g00588 . . . . . . . . . . . Cma17g00211 . Car17g00187 Cpe12g00179 . . . . . . . . . . . . . . . Lsi09g01296 . . Cme05g00484
Vvi5g553 . . . . . Bpe14g01211 . . Cmo08g01099 . Cma06g01374 . . . Sed01g1229 Cpe08g00282 . Bhi01g00762 Tan10g0793 Cmetu01g2381 . . . . Cla06g00611 Cam06g0649 Cec06g0652 Cco06g0655 Clacu06g0636 Cmu06g0630 Cre06g1397 Cone14ag0871 . Cone7ag0276 Cone4ag0269 Lsi05g01635 Csa02g01126 Chy05g00382 . . . . Bda13g00101 . Bpe13g00589 Bma02g00823 . . Cmo06g01386 . Cma08g01126 Cma17g00208 . Car17g00184 Cpe12g00177 Cpe17g00163 . . . . . . . Cla05g00511 Cam05g0562 Cec05g0574 Cco05g0572 Clacu05g0559 Cmu05g0530 Cre05g0599 Lsi09g01295 Csa03g01293 . Cme05g00486
Vvi5g554 Blo01g00111 . . Bda08g00254 . . . Bma05g01092 Cmo08g01098 Cmo17g00201 . . . . . . . . . . . . . . Cla06g00612 Cam06g0650 Cec06g0653 Cco06g0656 Clacu06g0637 Cmu06g0631 Cre06g1398 Cone14ag0872 . . . . Csa02g01125 Chy05g00381 . . Blo07g00232 Bda11g00596 . Bpe05g00883 Bpe13g00588 . Bma06g01570 Sed09g0734 . . Cma08g01125 . Car08g01006 Car17g00183 Cpe12g00176 Cpe17g00164 Bhi12g02238 Tan06g2483 Cmetu05g1474 . . . . . . . . . . . Lsi09g01294 . . Cme05g00489
Vvi5g555 . . Bda03g00867 . . . . . . . . . Car06g01188 . Sed02g1341 . . Bhi01g00761 Tan10g0792 Cmetu06g0848 Lac12g2248 Hepe05g1585 . Lcy11g1580 . . . . . . . . . Cone7ag0277 . . Csa02g01124 . Cme06g00576 . . . . . . . . . . . . . . . . . . . . . . . . Cla05g00510 Cam05g0561 Cec05g0573 Cco05g0571 Clacu05g0558 Cmu05g0529 Cre05g0598 Lsi09g01292 Csa03g01292 . .
Vvi5g556 . . . . . . Bma04g00762 . . Cmo17g00199 Cma06g01371 Cma14g01745 . Car14g01573 . Cpe08g00283 Cpe03g01463 . . . . . . . Cla06g00613 Cam06g0651 Cec06g0654 Cco06g0657 Clacu06g0638 Cmu06g0632 Cre06g1399 . . Cone7ag0278 Cone4ag0270 Lsi05g01636 . . . . . Bda11g00597 . . Bpe13g00587 . . Sed09g0733 Cmo06g01384 Cmo14g01782 . Cma17g00207 . Car17g00182 Cpe12g00175 . Bhi12g02240 Tan06g2482 Cmetu05g0857 . . . Lcy13g0312 . . . . . . . . . Chy06g00546 Cme05g00490
Vvi5g557 . . . Bda08g00255 . . . Bma05g01091 . . Cma06g01370 . Car06g01187 Car14g01574 Sed02g1342 . Cpe03g01464 Bhi01g00760 Tan10g0791 Cmetu06g1701 . Hepe05g1586 . Lcy11g1582 . . . . . . . . . . . Lsi05g01637 . . Cme06g00575 . . . . Bpe05g00882 . . . . . . . . . . . . . . . . . . . Cla05g00509 Cam05g0560 Cec05g0572 Cco05g0570 Clacu05g0557 Cmu05g0528 Cre05g0597 . Csa03g01291 . .
Vvi5g558 . . . . . . . . . . . Cma14g01746 Car06g01186 Car14g01575 Sed02g1343 Cpe08g00285 Cpe03g01466 Bhi01g00759 Tan10g0790 Cmetu06g0219 . Hepe05g1587 . Lcy11g1583 . . . . . . . . . Cone7ag0280 Cone4ag0272 Lsi05g01638 . . Cme06g00574 . Blo07g00233 Bda11g00598 . . Bpe13g00586 . Bma06g01571 . Cmo06g01383 Cmo14g01783 . . . . . . . . . . . . . Cla05g00508 Cam05g0559 Cec05g0571 Cco05g0569 Clacu05g0556 Cmu05g0527 Cre05g0596 . Csa03g01290 Chy06g00544 .
   
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Gene_GFF

Select Chromosome Start End Strand Old_gene Gene Num
3 7524412 7526551 - Bda016858.1 Bda03g00867 867
3 7557425 7561753 + Bda016862.1 Bda03g00871 871
8 2562876 2566273 + Bda024673.1 Bda08g00247 247
8 2567292 2570315 + Bda024674.1 Bda08g00248 248
8 2622065 2624886 + Bda024681.1 Bda08g00254 254
8 2631393 2632671 + Bda024682.1 Bda08g00255 255
11 6062334 6065403 + Bda005336.1 Bda11g00595 595
11 6070796 6073191 + Bda005337.1 Bda11g00596 596
11 6085840 6089035 + Bda005340.1 Bda11g00597 597
11 6091098 6101926 + Bda005341.1 Bda11g00598 598
13 1384930 1385365 + Bda000955.1 Bda13g00101 101
13 1392990 1396314 - Bda000957.1 Bda13g00103 103
1 14368425 14375044 - XM_039022159.1 Bhi01g00759 759
1 14413653 14416510 - XM_039022281.1 Bhi01g00760 760
1 14422110 14425594 - XM_039029217.1 Bhi01g00761 761
1 14432857 14433768 + XM_039049260.1 Bhi01g00762 762
1 14440672 14446092 - XM_039026072.1 Bhi01g00764 764
12 71709044 71714068 + XM_039050768.1 Bhi12g02238 2238
12 71719620 71720889 + XM_039050773.1 Bhi12g02240 2240
1 1537743 1549904 - BLOR00111 Blo01g00111 111
1 1603451 1604846 - BLOR00115 Blo01g00115 115
2 8576483 8579716 - BLOR10251 Blo02g00521 521
2 8593847 8612816 - BLOR10252 Blo02g00522 522
2 10973239 10974826 + BLOR10318 Blo02g00588 588
7 2892619 2895680 + BLOR18163 Blo07g00231 231
7 2912039 2917249 + BLOR18164 Blo07g00232 232
7 2918956 2936054 + BLOR18165 Blo07g00233 233
12 19194967 19196968 - BLOR04357 Blo12g00338 338
2 44747702 44747968 + Bma015570.1 Bma02g00823 823
2 44788118 44791448 - Bma015572.1 Bma02g00825 825
4 8187348 8189577 - Bma019280.1 Bma04g00762 762
4 8252657 8254335 + Bma019287.1 Bma04g00766 766
5 49637458 49638843 - Bma022259.1 Bma05g01091 1091
5 49647358 49649438 - Bma022260.1 Bma05g01092 1092
5 49747416 49750371 - Bma022270.1 Bma05g01098 1098
6 51973516 51977889 + Bma024687.1 Bma06g01569 1569
6 51983574 51985935 + Bma024688.2 Bma06g01570 1570
6 51988285 52002172 + Bma024689.1 Bma06g01571 1571
4 5388435 5390216 + Bpe015476.1 Bpe04g00816 816
5 21960206 21961575 - Bpe018293.1 Bpe05g00882 882
5 21967161 21968890 - Bpe018294.1 Bpe05g00883 883
5 21989181 21992066 - Bpe018299.1 Bpe05g00888 888
5 21992824 21994665 - Bpe018300.1 Bpe05g00889 889
13 12991434 12996927 - Bpe010289.1 Bpe13g00586 586
13 12998969 13001831 - Bpe010290.3 Bpe13g00587 587
13 13003423 13005890 - Bpe010291.1 Bpe13g00588 588
13 13008669 13009118 + Bpe010292.1 Bpe13g00589 589
13 13011376 13014396 - Bpe010293.1 Bpe13g00590 590
14 9018736 9019739 + Bpe014574.1 Bpe14g01208 1208
14 9022922 9026194 + Bpe025542 Bpe14g01209 1209
14 9027190 9028623 + Bpe014575.1 Bpe14g01210 1210
14 9049376 9049807 - Bpe014576.1 Bpe14g01211 1211
5 4947409 4954011 - CaPI482276_05g005590.1 Cam05g0559 559
5 4958190 4961154 - CaPI482276_05g005600.1 Cam05g0560 560
5 4968875 4971651 - CaPI482276_05g005610.1 Cam05g0561 561
5 4977443 4977835 + CaPI482276_05g005620.1 Cam05g0562 562
5 4983780 4988456 - CaPI482276_05g005630.1 Cam05g0563 563
6 8666725 8668795 + CaPI482276_06g006440.1 Cam06g0644 644
6 8698724 8702024 + CaPI482276_06g006450.1 Cam06g0645 645
6 8705212 8706449 - CaPI482276_06g006460.1 Cam06g0646 646
6 8708742 8711838 + CaPI482276_06g006470.1 Cam06g0647 647
6 8719776 8720240 - CaPI482276_06g006490.1 Cam06g0649 649
6 8734586 8739304 + CaPI482276_06g006500.1 Cam06g0650 650
6 8741048 8741968 + CaPI482276_06g006510.1 Cam06g0651 651
6 8698113 8704311 - Carg06171-RA Car06g01186 1186
6 8705908 8707694 - Carg06170-RA Car06g01187 1187
6 8709018 8712827 - Carg06169-RA Car06g01188 1188
6 8717984 8719375 - Carg06168-RA Car06g01189 1189
8 6906738 6910988 - Carg15884-RA Car08g01006 1006
8 6921000 6925297 - Carg15886-RA Car08g01008 1008
8 6929417 6932145 - Carg15887-RA Car08g01009 1009
14 12825637 12828206 + Carg23492-RA Car14g01571 1571
14 12832263 12834258 + Carg23490-RA Car14g01573 1573
14 12835035 12835908 + Carg23489-RA Car14g01574 1574
14 12836936 12843673 + Carg23488-RA Car14g01575 1575
17 1119169 1120537 - Carg10049-RA Car17g00182 182
17 1121634 1126051 - Carg10048-RA Car17g00183 183
17 1128726 1129097 + Carg10047-RA Car17g00184 184
17 1136523 1138241 - Carg10044-RA Car17g00187 187
17 1139978 1140949 + Carg10043-RA Car17g00188 188
17 1142559 1145381 - Carg10042-RA Car17g00189 189
5 4614667 4621266 - CcPI632755_05g005690.1 Cco05g0569 569
5 4630701 4633694 - CcPI632755_05g005700.1 Cco05g0570 570
5 4641607 4645810 - CcPI632755_05g005710.1 Cco05g0571 571
5 4649963 4650353 + CcPI632755_05g005720.1 Cco05g0572 572
5 4656381 4661299 - CcPI632755_05g005730.1 Cco05g0573 573
6 7190290 7192364 + CcPI632755_06g006500.1 Cco06g0650 650
6 7224826 7228123 + CcPI632755_06g006510.1 Cco06g0651 651
6 7231242 7232559 - CcPI632755_06g006520.1 Cco06g0652 652
6 7234789 7237784 + CcPI632755_06g006530.1 Cco06g0653 653
6 7245853 7246300 - CcPI632755_06g006550.1 Cco06g0655 655
6 7262215 7266866 + CcPI632755_06g006560.1 Cco06g0656 656
6 7268624 7269545 + CcPI632755_06g006570.1 Cco06g0657 657
5 4643271 4650259 - CePI673135_05g005710.1 Cec05g0571 571
5 4654143 4657123 - CePI673135_05g005720.1 Cec05g0572 572
5 4665211 4669554 - CePI673135_05g005730.1 Cec05g0573 573
5 4673753 4674146 + CePI673135_05g005740.1 Cec05g0574 574
5 4678547 4684695 - CePI673135_05g005750.1 Cec05g0575 575
6 7230084 7232207 + CePI673135_06g006470.1 Cec06g0647 647
6 7262559 7265858 + CePI673135_06g006480.1 Cec06g0648 648
6 7269007 7270259 - CePI673135_06g006490.1 Cec06g0649 649
6 7272566 7275732 + CePI673135_06g006500.1 Cec06g0650 650
6 7283685 7284146 - CePI673135_06g006520.1 Cec06g0652 652
6 7298659 7303378 + CePI673135_06g006530.1 Cec06g0653 653
6 7305135 7306056 + CePI673135_06g006540.1 Cec06g0654 654
5 4113914 4120822 - Chy5G094270.1 Chy05g00381 381
5 4129629 4130167 + Chy5G094280.1 Chy05g00382 382
5 4138497 4140293 - Chy5G094320.1 Chy05g00386 386
5 4140716 4142184 + Chy5G094330.1 Chy05g00387 387
5 4144516 4147817 - Chy5G094340.1 Chy05g00388 388
5 4174853 4176944 - Chy5G094350.1 Chy05g00389 389
6 3702218 3708227 - Chy6G110720.1 Chy06g00544 544
6 3719849 3723685 - Chy6G110740.1 Chy06g00546 546
6 3731565 3735639 - Chy6G110770.1 Chy06g00549 549
5 4660448 4667062 - ClG42_05g0055600.10 Clacu05g0556 556
5 4671295 4674259 - ClG42_05g0055700.10 Clacu05g0557 557
5 4681702 4684664 - ClG42_05g0055800.10 Clacu05g0558 558
5 4690132 4690525 + ClG42_05g0055900.10 Clacu05g0559 559
5 4696438 4701201 - ClG42_05g0056000.10 Clacu05g0560 560
6 7225351 7227436 + ClG42_06g0063100.10 Clacu06g0631 631
6 7257425 7260725 + ClG42_06g0063200.10 Clacu06g0632 632
6 7263715 7264950 - ClG42_06g0063300.10 Clacu06g0633 633
6 7267204 7270150 + ClG42_06g0063400.10 Clacu06g0634 634
6 7277931 7278385 - ClG42_06g0063600.10 Clacu06g0636 636
6 7294358 7299053 + ClG42_06g0063700.10 Clacu06g0637 637
6 7300753 7301673 + ClG42_06g0063800.10 Clacu06g0638 638
5 4694716 4701819 - ClCG05G004860.1 Cla05g00508 508
5 4706797 4709763 - ClCG05G004870.1 Cla05g00509 509
5 4717207 4720169 - ClCG05G004880.2 Cla05g00510 510
5 4725637 4726030 + ClCG05G004890.1 Cla05g00511 511
5 4731895 4736658 - ClCG05G004900.1 Cla05g00512 512
6 7344480 7346794 + ClCG06G006430.1 Cla06g00606 606
6 7379633 7383165 + ClCG06G006440.1 Cla06g00607 607
6 7388480 7389715 - ClCG06G006450.1 Cla06g00608 608
6 7391991 7395019 + ClCG06G006460.1 Cla06g00609 609
6 7404093 7404790 - ClCG06G006480.1 Cla06g00611 611
6 7420379 7424826 + ClCG06G006490.2 Cla06g00612 612
6 7426868 7428151 + ClCG06G006500.2 Cla06g00613 613
6 8944268 8953821 - CmaCh06G013700.1 Cma06g01370 1370
6 8954752 8958236 - CmaCh06G013710.1 Cma06g01371 1371
6 8963820 8964110 + CmaCh06G013740.1 Cma06g01374 1374
6 8966041 8967345 - CmaCh06G013750.1 Cma06g01375 1375
8 6956617 6960695 - CmaCh08G011250.1 Cma08g01125 1125
8 6964267 6964998 + CmaCh08G011260.1 Cma08g01126 1126
8 6968030 6975273 - CmaCh08G011270.1 Cma08g01127 1127
8 6979986 6982689 - CmaCh08G011280.1 Cma08g01128 1128
14 12755533 12758495 + CmaCh14G017430.1 Cma14g01743 1743
14 12761925 12763490 + CmaCh14G017450.1 Cma14g01745 1745
14 12764441 12773142 + CmaCh14G017460.1 Cma14g01746 1746
17 1073070 1079421 - CmaCh17G002070.1 Cma17g00207 207
17 1081269 1081640 + CmaCh17G002080.1 Cma17g00208 208
17 1088228 1089905 - CmaCh17G002110.1 Cma17g00211 211
17 1090988 1092085 + CmaCh17G002120.1 Cma17g00212 212
17 1093636 1096766 - CmaCh17G002130.1 Cma17g00213 213
5 4458640 4462595 + MELO3C014288.2.1 Cme05g00481 481
5 4465377 4466651 - MELO3C031180.2.1 Cme05g00483 483
5 4466515 4468084 + MELO3C014286.2.1 Cme05g00484 484
5 4475997 4476795 - MELO3C014284.2.1 Cme05g00486 486
5 4503421 4508299 + MELO3C014283.2.1 Cme05g00489 489
5 4509540 4510619 + MELO3C014282.2.1 Cme05g00490 490
6 3647238 3653459 - MELO3C006500.2.1 Cme06g00574 574
6 3658545 3661339 - MELO3C006501.2.1 Cme06g00575 575
6 3664683 3668238 - MELO3C006502.2.1 Cme06g00576 576
6 3677221 3681665 - MELO3C006503.2.1 Cme06g00578 578
1 1006746 1007362 + PI0020366.1 Cmetu01g2381 2381
5 19122713 19123612 - PI0019870.1 Cmetu05g0857 857
5 19125368 19130344 - PI0016385.1 Cmetu05g1474 1474
6 3900355 3907070 - PI0027824.1 Cmetu06g0219 219
6 3930683 3935314 - PI0003670.1 Cmetu06g0329 329
6 3917440 3920358 - PI0008080.1 Cmetu06g0848 848
6 29828413 29834743 + PI0012544.1 Cmetu06g1701 1701
6 10158115 10164800 - CmoCh06G013830.1 Cmo06g01383 1383
6 10166157 10173534 - CmoCh06G013840.1 Cmo06g01384 1384
6 10176512 10176802 + CmoCh06G013860.1 Cmo06g01386 1386
6 10179074 10180481 - CmoCh06G013870.1 Cmo06g01387 1387
8 7044552 7048643 - CmoCh08G010980.1 Cmo08g01098 1098
8 7052319 7053149 + CmoCh08G010990.1 Cmo08g01099 1099
8 7056498 7063138 - CmoCh08G011010.1 Cmo08g01101 1101
14 13729193 13732632 + CmoCh14G017800.1 Cmo14g01780 1780
14 13736223 13738331 + CmoCh14G017820.1 Cmo14g01782 1782
14 13739183 13747848 + CmoCh14G017830.1 Cmo14g01783 1783
17 1182369 1183882 - CmoCh17G001990.1 Cmo17g00199 199
17 1185419 1189477 - CmoCh17G002010.1 Cmo17g00201 201
17 1200498 1202310 - CmoCh17G002040.1 Cmo17g00204 204
17 1203977 1204945 + CmoCh17G002050.1 Cmo17g00205 205
17 1206528 1209749 - CmoCh17G002060.1 Cmo17g00206 206
5 4503938 4510552 - CmPI595203_05g005270.1 Cmu05g0527 527
5 4514822 4517781 - CmPI595203_05g005280.1 Cmu05g0528 528
5 4525221 4528184 - CmPI595203_05g005290.1 Cmu05g0529 529
5 4533650 4534041 + CmPI595203_05g005300.1 Cmu05g0530 530
5 4539970 4544730 - CmPI595203_05g005310.1 Cmu05g0531 531
6 7031747 7033832 + CmPI595203_06g006250.1 Cmu06g0625 625
6 7063832 7067132 + CmPI595203_06g006260.1 Cmu06g0626 626
6 7070092 7071327 - CmPI595203_06g006270.1 Cmu06g0627 627
6 7073583 7076532 + CmPI595203_06g006280.1 Cmu06g0628 628
6 7084308 7084762 - CmPI595203_06g006300.1 Cmu06g0630 630
6 7100819 7105514 + CmPI595203_06g006310.1 Cmu06g0631 631
6 7107224 7108144 + CmPI595203_06g006320.1 Cmu06g0632 632
4 1197017 1198824 + Conep04aG0027600.1 Cone4ag0267 267
4 1202420 1205693 + Conep04aG0027700.1 Cone4ag0268 268
4 1209366 1210060 - Conep04aG0027800.1 Cone4ag0269 269
4 1212363 1214314 + Conep04aG0027900.1 Cone4ag0270 270
4 1221407 1226749 + Conep04aG0028100.1 Cone4ag0272 272
7 1149328 1151240 + Conep07aG0027900.1 Cone7ag0274 274
7 1155506 1158895 + Conep07aG0028000.1 Cone7ag0275 275
7 1160897 1161741 - Conep07aG0028100.1 Cone7ag0276 276
7 1164070 1165189 + Conep07aG0028200.1 Cone7ag0277 277
7 1165274 1167314 + Conep07aG0028300.1 Cone7ag0278 278
7 1172448 1177601 + Conep07aG0028500.1 Cone7ag0280 280
14 5572146 5575339 + Conep14aG0088700.1 Cone14ag0870 870
14 5593733 5594140 - Conep14aG0088800.1 Cone14ag0871 871
14 5607392 5611498 + Conep14aG0088900.1 Cone14ag0872 872
3 11635555 11638132 + Cp4.1LG03g10560.1 Cpe03g01461 1461
3 11642018 11643918 + Cp4.1LG03g10550.1 Cpe03g01463 1463
3 11644910 11645838 + Cp4.1LG03g10540.1 Cpe03g01464 1464
3 11646857 11653641 + Cp4.1LG03g10530.1 Cpe03g01466 1466
8 1812882 1814900 + Cp4.1LG08g03970.1 Cpe08g00281 281
8 1817988 1818278 - Cp4.1LG08g03850.1 Cpe08g00282 282
8 1821665 1825119 + Cp4.1LG08g03950.1 Cpe08g00283 283
8 1829585 1836216 + Cp4.1LG08g03940.1 Cpe08g00285 285
12 1138386 1139777 - Cp4.1LG12g01800.1 Cpe12g00175 175
12 1140816 1145265 - Cp4.1LG12g01830.1 Cpe12g00176 176
12 1147777 1148148 + Cp4.1LG12g01730.1 Cpe12g00177 177
12 1156063 1157812 - Cp4.1LG12g01760.1 Cpe12g00179 179
12 1159268 1160829 + Cp4.1LG12g01680.1 Cpe12g00180 180
12 1161573 1164857 - Cp4.1LG12g01840.1 Cpe12g00181 181
17 1013103 1015920 + Cp4.1LG17g01480.1 Cpe17g00160 160
17 1020615 1024664 + Cp4.1LG17g01660.1 Cpe17g00161 161
17 1030802 1031796 - Cp4.1LG17g01710.1 Cpe17g00163 163
17 1038124 1045265 + Cp4.1LG17g01670.1 Cpe17g00164 164
5 5291826 5298439 - CrPI670011_05g005960.1 Cre05g0596 596
5 5302740 5305635 - CrPI670011_05g005970.1 Cre05g0597 597
5 5313961 5318281 - CrPI670011_05g005980.1 Cre05g0598 598
5 5322256 5322650 + CrPI670011_05g005990.1 Cre05g0599 599
5 5328597 5333469 - CrPI670011_05g006000.1 Cre05g0600 600
6 8100329 8102442 + CrPI670011_06g013920.1 Cre06g1392 1392
6 8134605 8137905 + CrPI670011_06g013930.1 Cre06g1393 1393
6 8141059 8142307 - CrPI670011_06g013940.1 Cre06g1394 1394
6 8144609 8147716 + CrPI670011_06g013950.1 Cre06g1395 1395
6 8155706 8156167 - CrPI670011_06g013970.1 Cre06g1397 1397
6 8171412 8176046 + CrPI670011_06g013980.1 Cre06g1398 1398
6 8177806 8178727 + CrPI670011_06g013990.1 Cre06g1399 1399
2 11016700 11017600 - CsaV3_2G013400.1 Csa02g01124 1124
2 11018865 11024192 - CsaV3_2G013410.1 Csa02g01125 1125
2 11032234 11033149 + CsaV3_2G013420.1 Csa02g01126 1126
2 11040204 11041998 - CsaV3_2G013440.1 Csa02g01128 1128
2 11042202 11044394 + CsaV3_2G013450.1 Csa02g01129 1129
2 11045612 11049764 - CsaV3_2G013460.1 Csa02g01130 1130
2 11070748 11073864 - CsaV3_2G013470.1 Csa02g01131 1131
3 9861878 9868715 - CsaV3_3G012900.1 Csa03g01290 1290
3 9871823 9874637 - CsaV3_3G012910.1 Csa03g01291 1291
3 9877596 9881390 - CsaV3_3G012920.1 Csa03g01292 1292
3 9884117 9885224 + CsaV3_3G012930.1 Csa03g01293 1293
3 9889513 9893829 - CsaV3_3G012940.1 Csa03g01294 1294
5 65457927 65464079 + Hsped.05g15830.1 Hepe05g1583 1583
5 65479792 65483026 + Hsped.05g15850.1 Hepe05g1585 1585
5 65489523 65492523 + Hsped.05g15860.1 Hepe05g1586 1586
5 65496453 65504458 + Hsped.05g15870.1 Hepe05g1587 1587
12 39618601 39619531 - Lag0016620.1 Lac12g2248 2248
12 39663445 39666709 - Lag0016627.1 Lac12g2255 2255
11 39612899 39618737 + Maker00031395 Lcy11g1578 1578
11 39633384 39635493 + Maker00031996 Lcy11g1580 1580
11 39640266 39644368 + Maker00031472 Lcy11g1582 1582
11 39646834 39654065 + Maker00031872 Lcy11g1583 1583
13 3383617 3385215 + Maker00023187 Lcy13g0312 312
5 23994067 23998463 + Lsi05G016340.1 Lsi05g01634 1634
5 24006136 24006518 - Lsi05G016350.1 Lsi05g01635 1635
5 24013655 24017275 + Lsi05G016360.1 Lsi05g01636 1636
5 24021504 24025463 + Lsi05G016370.1 Lsi05g01637 1637
5 24031103 24040020 + Lsi05G016380.1 Lsi05g01638 1638
9 20776421 20777711 - Lsi09G012920.1 Lsi09g01292 1292
9 20779904 20783983 - Lsi09G012940.1 Lsi09g01294 1294
9 20795732 20796613 + Lsi09G012950.1 Lsi09g01295 1295
9 20805162 20808391 - Lsi09G012960.1 Lsi09g01296 1296
9 20811590 20815317 + Lsi09G012970.1 Lsi09g01297 1297
9 20820003 20830713 - Lsi09G012980.1 Lsi09g01298 1298
9 20857704 20860678 - Lsi09G012990.1 Lsi09g01299 1299
1 9129625 9130977 - Sed0010903.1 Sed01g1229 1229
2 49735447 49741269 + Sed0003921.1 Sed02g1340 1340
2 49752848 49757378 + Sed0009282.1 Sed02g1341 1341
2 49760525 49763425 + Sed0000515.1 Sed02g1342 1342
2 49766258 49776557 + Sed0002276.1 Sed02g1343 1343
9 12764057 12766706 - Sed0022372.1 Sed09g0733 733
9 12767038 12772739 - Sed0024780.1 Sed09g0734 734
6 77542872 77543785 - Tan0014924.1 Tan06g2482 2482
6 77544765 77549936 - Tan0014723.1 Tan06g2483 2483
10 6545826 6552541 - Tan0007913.2 Tan10g0790 790
10 6556693 6559454 - Tan0020817.1 Tan10g0791 791
10 6564857 6568671 - Tan0012763.1 Tan10g0792 792
10 6584297 6585271 + Tan0021925.1 Tan10g0793 793
10 6597302 6602659 - Tan0004055.1 Tan10g0794 794
5 5692343 5695265 + Vvi5g549 Vvi5g549 549
5 5705510 5709264 + Vvi5g550 Vvi5g550 550
5 5713009 5714251 - Vvi5g551 Vvi5g551 551
5 5718041 5720567 + Vvi5g552 Vvi5g552 552
5 5725670 5726108 - Vvi5g553 Vvi5g553 553
5 5731875 5738598 + Vvi5g554 Vvi5g554 554
5 5739314 5740456 + Vvi5g555 Vvi5g555 555
5 5740522 5747815 + Vvi5g556 Vvi5g556 556
5 5751268 5752716 + Vvi5g557 Vvi5g557 557
5 5754361 5770514 + Vvi5g558 Vvi5g558 558
       

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