Doc-Alignment

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Cucurbitales genomes. We used V.vinifera as a reference, and by comparing homologous gene locus maps and Ks values between V.vinifera and other Cucurbitales, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We created a hierarchical lists of homologous genes using V.vinifera as a reference.
  The relevant gene ids can be obtained from the Cucurbitales blast and match under the Tools module. This link is Cucurbitales blast and match.

Orthogroup analysis platform
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Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g469 . . . . . Bpe14g01179 . . . . Cma06g01421 Cma14g01693 Car06g01224 Car14g01526 . Cpe08g00253 Cpe03g01426 Bhi01g00831 . . . . . . . . . . . . . Cone14ag0839 . . . Lsi05g01435 . . Cme06g00623 Blo02g00549 Blo07g00212 Bda11g00569 . . Bpe13g00615 Bma02g00857 Bma06g01548 . Cmo06g01421 Cmo14g01738 . . . . . . . . . . . . . Cla05g00559 Cam05g0612 Cec05g0623 Cco05g0621 Clacu05g0610 Cmu05g0579 Cre05g0647 . Csa03g01348 Chy06g00594 .
Vvi5g470 . Blo12g00322 Bda03g00894 Bda08g00422 Bpe04g00839 . Bma04g00792 Bma05g00915 Cmo08g01128 Cmo17g00235 . . . . . . . . . . . . . . Cla06g00567 Cam06g0607 Cec06g0607 Cco06g0613 Clacu06g0593 Cmu06g0588 Cre06g1354 Cone14ag0840 . . . . . . . . . . . Bpe05g00733 . . . Sed09g0770 . . Cma08g01154 Cma17g00249 . Car17g00223 Cpe12g00206 . Bhi12g01730 Tan06g2537 Cmetu05g0762 Lac12g2300 Hepe03g0183 . Lcy13g0266 . . . . . . . Lsi09g01334 . . .
Vvi5g471 Blo01g00129 . Bda03g00893 Bda08g00232 Bpe04g00838 . . Bma05g01113 . . Cma06g01420 Cma14g01694 . . Sed12g0910 . . Bhi01g00829 Tan10g0859 Cmetu06g2545 . . . . . . . . . . . . . Cone7ag0240 Cone4ag0230 Lsi05g01433 . . Cme06g00621 . . . . Bpe05g00907 . . . . Cmo06g01420 Cmo14g01739 . . . . . . . . . . . . . Cla05g00558 Cam05g0611 Cec05g0621 Cco05g0617 Clacu05g0609 Cmu05g0578 Cre05g0646 . Csa03g01346 Chy06g00592 .
Vvi5g472 . . . . . . . . Cmo08g01127 Cmo17g00234 . . . . . . . . . . . . . . Cla06g00568 Cam06g0608 Cec06g0608 Cco06g0614 Clacu06g0594 Cmu06g0589 Cre06g1355 . . . . . . . . . Blo07g00213 Bda11g00570 . . Bpe13g00614 . Bma06g01549 Sed04g1889 . . Cma08g01153 Cma17g00248 . Car17g00222 Cpe12g00205 Cpe17g00141 Bhi12g01729 Tan06g2536 Cmetu05g0964 . . . Lcy13g0267 . . . . . . . Lsi09g01333 . . .
Vvi5g473 . Blo12g00323 . . . . . . . Cmo17g00233 . Cma14g01695 . . . . . Bhi01g00827 . . . . . . Cla06g00569 Cam06g0609 Cec06g0609 Cco06g0615 Clacu06g0595 Cmu06g0590 Cre06g1356 . . . Cone4ag0232 Lsi05g01432 . . Cme06g00620 Blo02g00548 . . . . Bpe13g00613 . Bma06g01550 Sed04g1890 Cmo06g01419 Cmo14g01740 . Cma17g00247 . . . . Bhi12g01728 Tan06g2535 Cmetu01g2086 Lac12g2298 Hepe03g0185 . Lcy13g0268 Cla05g00557 Cam05g0609 Cec05g0619 Cco05g0615 Clacu05g0606 Cmu05g0576 Cre05g0644 Lsi09g01332 Csa03g01345 Chy06g00591 .
Vvi5g474 Blo01g00128 Blo12g00324 . Bda08g00233 Bpe04g00837 . Bma04g00791 Bma05g01112 Cmo08g01126 Cmo17g00232 . . . . . . . . . . . . . . Cla06g00571 Cam06g0610 Cec06g0611 Cco06g0617 Clacu06g0597 . Cre06g1358 Cone14ag0842 . . . . . . . . . . . Bpe05g00906 . . . . . . Cma08g01150 Cma17g00246 Car08g01031 Car17g00220 Cpe12g00204 Cpe17g00142 Bhi12g01725 . . Lac12g2296 . . . . . . . . . . Lsi09g01331 . . .
Vvi5g475 Blo01g00127 Blo12g00325 Bda03g00892 Bda08g00234 Bpe04g00836 Bpe14g01180 Bma04g00790 Bma05g01111 Cmo08g01125 Cmo17g00230 . . . . . . . . . . . . . . Cla06g00573 Cam06g0612 Cec06g0613 Cco06g0619 Clacu06g0599 Cmu06g0592 Cre06g1359 Cone14ag0843 Cone15ag0830 . Cone4ag0233 . . . . Blo02g00547 . . Bda13g00132 Bpe05g00905 . Bma02g00856 . Sed09g0767 . . Cma08g01148 Cma17g00244 Car08g01030 Car17g00219 Cpe12g00203 Cpe17g00143 Bhi12g01722 Tan06g2530 Cmetu05g1070 Lac12g2295 Hepe03g0188 . Lcy13g0271 . . . . . . . Lsi09g01330 . . .
Vvi5g476 Blo01g00126 . . . . . . Bma05g01110 Cmo08g01124 Cmo17g00229 . . . . . . . . . . . . . . Cla06g00574 Cam06g0613 Cec06g0614 Cco06g0620 Clacu06g0600 Cmu06g0593 Cre06g1361 . . Cone7ag0242 Cone4ag0235 . . . . . . . . Bpe05g00904 . . . Sed09g0766 . . Cma08g01147 Cma17g00242 . . . . Bhi12g01721 Tan06g2529 Cmetu05g1750 Lac12g2294 Hepe03g0189 . Lcy13g0273 . . . . . . . Lsi09g01329 . . .
Vvi5g477 . . . . . Bpe14g01181 . . . . Cma06g01417 Cma14g01696 Car06g01223 Car14g01527 Sed02g1247 Cpe08g00254 Cpe03g01427 Bhi01g00824 Tan10g0856 Cmetu06g1314 . Hepe05g1539 . Lcy11g1530 . . . . . . . . . . . Lsi05g01428 . . Cme06g00618 Blo02g00545 . . Bda13g00131 . Bpe13g00612 . . . . Cmo14g01741 . . . . . . . . . . . . . Cla05g00554 Cam05g0604 Cec05g0613 Cco05g0611 Clacu05g0600 Cmu05g0570 Cre05g0639 . Csa03g01342 Chy06g00588 .
Vvi5g478 . . Bda03g00891 . Bpe04g00835 . Bma04g00789 . Cmo08g01123 Cmo17g00228 . . . . . . . . . . . . . . Cla06g00575 Cam06g0614 Cec06g0615 Cco06g0621 Clacu06g0601 Cmu06g0594 Cre06g1362 Cone14ag0844 . . . . . . . . . . . . . . . . . . . Cma17g00241 Car08g01029 Car17g00218 Cpe12g00202 Cpe17g00144 Bhi12g01720 . . . . . . . . . . . . . Lsi09g01328 . . .
   
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Gene_GFF

Select Chromosome Start End Strand Old_gene Gene Num
3 7773625 7775256 + Bda033505 Bda03g00891 891
3 7778604 7782518 + Bda016886.1 Bda03g00892 892
3 7799577 7803094 + Bda033506 Bda03g00893 893
3 7804892 7815674 - Bda016889.1 Bda03g00894 894
8 2310712 2317578 - Bda024647.1 Bda08g00232 232
8 2333611 2339077 + Bda024649.1 Bda08g00233 233
8 2342702 2345449 - Bda033798 Bda08g00234 234
8 4274229 4283125 + Bda024870.1 Bda08g00422 422
11 5880849 5892006 + Bda005308.1 Bda11g00569 569
11 5892431 5893156 - Bda005309.1 Bda11g00570 570
13 1696960 1697562 - Bda000990.1 Bda13g00131 131
13 1700394 1702905 + Bda000991.1 Bda13g00132 132
1 15558592 15559483 - XM_039020236.1 Bhi01g00824 824
1 15603121 15607741 - XM_039029883.1 Bhi01g00827 827
1 15679242 15681017 + XM_039050974.1 Bhi01g00829 829
1 15718800 15736921 - XM_039027638.1 Bhi01g00831 831
12 55714509 55718007 + XM_039051061.1 Bhi12g01720 1720
12 55724287 55730521 - XM_039018832.1 Bhi12g01721 1721
12 55791699 55798828 + XM_039018687.1 Bhi12g01722 1722
12 55836623 55843933 - XM_039018392.1 Bhi12g01725 1725
12 55910130 55916434 + XM_039020248.1 Bhi12g01728 1728
12 55926028 55928696 + XM_039050911.1 Bhi12g01729 1729
12 55929850 55937929 - XM_039019659.1 Bhi12g01730 1730
1 1711807 1715861 - BLOR00126 Blo01g00126 126
1 1726043 1730363 + BLOR00127 Blo01g00127 127
1 1742806 1754274 - BLOR00128 Blo01g00128 128
1 1780883 1786298 + BLOR00129 Blo01g00129 129
2 9363644 9364255 - BLOR10275 Blo02g00545 545
2 9478061 9485740 + BLOR10277 Blo02g00547 547
2 9583446 9585241 - BLOR10278 Blo02g00548 548
2 9640110 9646587 - BLOR10279 Blo02g00549 549
7 2698396 2706143 + BLOR18144 Blo07g00212 212
7 2706591 2707338 - BLOR18145 Blo07g00213 213
12 18725555 18734213 + BLOR04341 Blo12g00322 322
12 18735797 18739721 - BLOR04342 Blo12g00323 323
12 18785097 18790688 + BLOR04343 Blo12g00324 324
12 18804543 18808504 - BLOR04344 Blo12g00325 325
2 45860445 45868590 + Bma015613.1 Bma02g00856 856
2 45923871 45932461 - Bma015616.1 Bma02g00857 857
4 8937796 8939590 + Bma019314.2 Bma04g00789 789
4 8945324 8948202 + Bma019315.1 Bma04g00790 790
4 8950081 8955694 - Bma019316.1 Bma04g00791 791
4 9004903 9013780 - Bma019317.2 Bma04g00792 792
5 47078947 47083700 - Bma022038.1 Bma05g00915 915
5 49860440 49865032 - Bma022283.1 Bma05g01110 1110
5 49870553 49873309 + Bma022284.1 Bma05g01111 1111
5 49876912 49880123 - Bma022285.1 Bma05g01112 1112
5 49901283 49905976 + Bma022286.1 Bma05g01113 1113
6 51823861 51833188 + Bma024665.1 Bma06g01548 1548
6 51833597 51834304 - Bma024666.1 Bma06g01549 1549
6 51835853 51837489 - Bma024667.1 Bma06g01550 1550
4 5489724 5491458 + Bpe015495.1 Bpe04g00835 835
4 5494067 5496961 + Bpe015496.1 Bpe04g00836 836
4 5499025 5504590 - Bpe015497.1 Bpe04g00837 837
4 5511228 5514685 + Bpe015498.1 Bpe04g00838 838
4 5516404 5526312 - Bpe015499.1 Bpe04g00839 839
5 20807724 20821019 - Bpe018146.2 Bpe05g00733 733
5 22061185 22065878 - Bpe018315.1 Bpe05g00904 904
5 22076457 22079233 + Bpe018316.2 Bpe05g00905 905
5 22083375 22088803 - Bpe018317.1 Bpe05g00906 906
5 22096810 22101773 + Bpe018318.1 Bpe05g00907 907
13 13132386 13132943 - Bpe010310.1 Bpe13g00612 612
13 13135851 13137701 + Bpe010312.1 Bpe13g00613 613
13 13138679 13139392 + Bpe010313.1 Bpe13g00614 614
13 13139709 13149129 - Bpe010314.1 Bpe13g00615 615
14 8817026 8825123 + Bpe014553.1 Bpe14g01179 1179
14 8832830 8836185 - Bpe014554.1 Bpe14g01180 1180
14 8838815 8839426 + Bpe025534 Bpe14g01181 1181
5 5280774 5281403 - CaPI482276_05g006040.1 Cam05g0604 604
5 5302887 5304747 - CaPI482276_05g006090.1 Cam05g0609 609
5 5324050 5330059 + CaPI482276_05g006110.1 Cam05g0611 611
5 5331060 5344285 - CaPI482276_05g006120.1 Cam05g0612 612
6 8231757 8238883 + CaPI482276_06g006070.1 Cam06g0607 607
6 8240989 8243093 - CaPI482276_06g006080.1 Cam06g0608 608
6 8251264 8256078 - CaPI482276_06g006090.1 Cam06g0609 609
6 8283391 8289332 + CaPI482276_06g006100.1 Cam06g0610 610
6 8320553 8325729 - CaPI482276_06g006120.1 Cam06g0612 612
6 8349786 8354958 + CaPI482276_06g006130.1 Cam06g0613 613
6 8356279 8359612 - CaPI482276_06g006140.1 Cam06g0614 614
6 8857893 8858516 - Carg17412-RA Car06g01223 1223
6 8866284 8873805 - Carg17411-RA Car06g01224 1224
8 7023476 7025923 + Carg15908-RA Car08g01029 1029
8 7037692 7042401 + Carg15909-RA Car08g01030 1030
8 7045674 7051821 - Carg15910-RA Car08g01031 1031
14 12533359 12542241 + Carg23806-RA Car14g01526 1526
14 12555319 12555948 + Carg23805-RA Car14g01527 1527
17 1333815 1336038 + Carg05422-RA Car17g00218 218
17 1342405 1348840 + Carg05423-RA Car17g00219 219
17 1354369 1360279 - Carg05424-RA Car17g00220 220
17 1374663 1376476 + Carg05426-RA Car17g00222 222
17 1376376 1377681 - Carg05427-RA Car17g00223 223
5 4962514 4963143 - CcPI632755_05g006110.1 Cco05g0611 611
5 4979520 4982859 - CcPI632755_05g006150.1 Cco05g0615 615
5 4994536 4996312 + CcPI632755_05g006170.1 Cco05g0617 617
5 5026165 5039387 - CcPI632755_05g006210.1 Cco05g0621 621
6 6682195 6689319 + CcPI632755_06g006130.1 Cco06g0613 613
6 6691531 6693793 - CcPI632755_06g006140.1 Cco06g0614 614
6 6702390 6707134 - CcPI632755_06g006150.1 Cco06g0615 615
6 6736794 6744074 + CcPI632755_06g006170.1 Cco06g0617 617
6 6777568 6782756 - CcPI632755_06g006190.1 Cco06g0619 619
6 6811424 6816689 + CcPI632755_06g006200.1 Cco06g0620 620
6 6817966 6821216 - CcPI632755_06g006210.1 Cco06g0621 621
5 4983853 4984482 - CePI673135_05g006130.1 Cec05g0613 613
5 5007981 5009842 - CePI673135_05g006190.1 Cec05g0619 619
5 5030351 5035689 + CePI673135_05g006210.1 Cec05g0621 621
5 5037236 5049969 - CePI673135_05g006230.1 Cec05g0623 623
6 6763703 6774326 + CePI673135_06g006070.1 Cec06g0607 607
6 6776506 6778607 - CePI673135_06g006080.1 Cec06g0608 608
6 6786854 6791626 - CePI673135_06g006090.1 Cec06g0609 609
6 6817305 6824635 + CePI673135_06g006110.1 Cec06g0611 611
6 6851439 6856599 - CePI673135_06g006130.1 Cec06g0613 613
6 6881118 6886165 + CePI673135_06g006140.1 Cec06g0614 614
6 6887489 6890793 - CePI673135_06g006150.1 Cec06g0615 615
6 3999967 4000787 - Chy6G111160.1 Chy06g00588 588
6 4013364 4015207 - Chy6G111190.1 Chy06g00591 591
6 4019896 4021653 + Chy6G111200.1 Chy06g00592 592
6 4033840 4042136 - Chy6G111220.1 Chy06g00594 594
5 4996205 4996834 - ClG42_05g0060000.10 Clacu05g0600 600
5 5018389 5020249 - ClG42_05g0060600.10 Clacu05g0606 606
5 5040537 5046532 + ClG42_05g0060900.10 Clacu05g0609 609
5 5047513 5060533 - ClG42_05g0061000.10 Clacu05g0610 610
6 6778890 6786029 + ClG42_06g0059300.10 Clacu06g0593 593
6 6788214 6790224 - ClG42_06g0059400.10 Clacu06g0594 594
6 6798688 6803424 - ClG42_06g0059500.10 Clacu06g0595 595
6 6830764 6836720 + ClG42_06g0059700.10 Clacu06g0597 597
6 6865369 6870542 - ClG42_06g0059900.10 Clacu06g0599 599
6 6897898 6903122 + ClG42_06g0060000.10 Clacu06g0600 600
6 6904456 6907698 - ClG42_06g0060100.10 Clacu06g0601 601
5 5047525 5048154 - ClCG05G005225.1 Cla05g00554 554
5 5066645 5074891 - ClCG05G005243.1 Cla05g00557 557
5 5094604 5100599 + ClCG05G005247.1 Cla05g00558 558
5 5102100 5115267 - ClCG05G005250.2 Cla05g00559 559
6 6873535 6881777 + ClCG06G006050.2 Cla06g00567 567
6 6885181 6887300 - ClCG06G006060.1 Cla06g00568 568
6 6895738 6900474 - ClCG06G006065.1 Cla06g00569 569
6 6927363 6936087 + ClCG06G006080.2 Cla06g00571 571
6 6963246 6969017 - ClCG06G006090.2 Cla06g00573 573
6 6997070 7002675 + ClCG06G006100.1 Cla06g00574 574
6 7003529 7007071 - ClCG06G006110.1 Cla06g00575 575
6 9123630 9124253 - CmaCh06G014170.1 Cma06g01417 1417
6 9128030 9130778 - CmaCh06G014200.1 Cma06g01420 1420
6 9132888 9141153 - CmaCh06G014210.1 Cma06g01421 1421
8 7071442 7076131 - CmaCh08G011470.1 Cma08g01147 1147
8 7081493 7085956 + CmaCh08G011480.1 Cma08g01148 1148
8 7089518 7095435 - CmaCh08G011500.1 Cma08g01150 1150
8 7102379 7103112 + CmaCh08G011530.1 Cma08g01153 1153
8 7103231 7112327 - CmaCh08G011540.1 Cma08g01154 1154
14 12574030 12582948 + CmaCh14G016930.1 Cma14g01693 1693
14 12583458 12590999 - CmaCh14G016940.1 Cma14g01694 1694
14 12595148 12597599 + CmaCh14G016950.1 Cma14g01695 1695
14 12598569 12599195 + CmaCh14G016960.1 Cma14g01696 1696
17 1226862 1234334 + CmaCh17G002410.1 Cma17g00241 241
17 1234856 1238125 - CmaCh17G002420.1 Cma17g00242 242
17 1239972 1245561 + CmaCh17G002440.1 Cma17g00244 244
17 1252380 1258429 - CmaCh17G002460.1 Cma17g00246 246
17 1268310 1271184 + CmaCh17G002470.1 Cma17g00247 247
17 1272975 1275021 + CmaCh17G002480.1 Cma17g00248 248
17 1275208 1282796 - CmaCh17G002490.1 Cma17g00249 249
6 3952140 3953081 - MELO3C006539.2.1 Cme06g00618 618
6 3962094 3963858 - MELO3C006541.2.1 Cme06g00620 620
6 3964885 3967035 - MELO3C006542.2.1 Cme06g00621 621
6 3978677 3994098 - MELO3C006545.2.1 Cme06g00623 623
1 7982076 7983367 - PI0013640.1 Cmetu01g2086 2086
5 21185552 21193086 - PI0023585.1 Cmetu05g0762 762
5 21181107 21183779 + PI0011146.1 Cmetu05g0964 964
5 21125382 21131239 + PI0001001.1 Cmetu05g1070 1070
5 21105210 21111161 - PI0022926.1 Cmetu05g1750 1750
6 4198526 4199547 - PI0005049.1 Cmetu06g1314 1314
6 4212694 4215137 - PI0023378.1 Cmetu06g2545 2545
6 10326791 10328568 - CmoCh06G014190.1 Cmo06g01419 1419
6 10330004 10332032 - CmoCh06G014200.1 Cmo06g01420 1420
6 10333906 10341537 - CmoCh06G014210.1 Cmo06g01421 1421
8 7161906 7163483 + CmoCh08G011230.1 Cmo08g01123 1123
8 7163852 7168694 - CmoCh08G011240.1 Cmo08g01124 1124
8 7172876 7177297 + CmoCh08G011250.1 Cmo08g01125 1125
8 7181023 7187228 - CmoCh08G011260.1 Cmo08g01126 1126
8 7194381 7195307 + CmoCh08G011270.1 Cmo08g01127 1127
8 7198056 7208024 - CmoCh08G011280.1 Cmo08g01128 1128
14 13545890 13553614 + CmoCh14G017380.1 Cmo14g01738 1738
14 13554471 13559772 - CmoCh14G017390.1 Cmo14g01739 1739
14 13563636 13565911 + CmoCh14G017400.1 Cmo14g01740 1740
14 13566791 13567417 + CmoCh14G017410.1 Cmo14g01741 1741
17 1343928 1346247 + CmoCh17G002280.1 Cmo17g00228 228
17 1346865 1350251 - CmoCh17G002290.1 Cmo17g00229 229
17 1352438 1358174 + CmoCh17G002300.1 Cmo17g00230 230
17 1364458 1370739 - CmoCh17G002320.1 Cmo17g00232 232
17 1379606 1382133 + CmoCh17G002330.1 Cmo17g00233 233
17 1384546 1386527 + CmoCh17G002340.1 Cmo17g00234 234
17 1386457 1394930 - CmoCh17G002350.1 Cmo17g00235 235
5 4839889 4840518 - CmPI595203_05g005700.1 Cmu05g0570 570
5 4862052 4863912 - CmPI595203_05g005760.1 Cmu05g0576 576
5 4884150 4890170 + CmPI595203_05g005780.1 Cmu05g0578 578
5 4891151 4904164 - CmPI595203_05g005790.1 Cmu05g0579 579
6 6585530 6592669 + CmPI595203_06g005880.1 Cmu06g0588 588
6 6594847 6596857 - CmPI595203_06g005890.1 Cmu06g0589 589
6 6605305 6610098 - CmPI595203_06g005900.1 Cmu06g0590 590
6 6671886 6677054 - CmPI595203_06g005920.1 Cmu06g0592 592
6 6704337 6709565 + CmPI595203_06g005930.1 Cmu06g0593 593
6 6710899 6714128 - CmPI595203_06g005940.1 Cmu06g0594 594
4 1050028 1051662 + Conep04aG0023900.1 Cone4ag0230 230
4 1060186 1061820 - Conep04aG0024100.1 Cone4ag0232 232
4 1062585 1064967 - Conep04aG0024200.1 Cone4ag0233 233
4 1067113 1069381 + Conep04aG0024400.1 Cone4ag0235 235
7 1011578 1014454 - Conep07aG0024500.1 Cone7ag0240 240
7 1019205 1023000 + Conep07aG0024700.1 Cone7ag0242 242
14 5202862 5211036 + Conep14aG0085600.1 Cone14ag0839 839
14 5213351 5221551 + Conep14aG0085700.1 Cone14ag0840 840
14 5274312 5281243 + Conep14aG0085900.1 Cone14ag0842 842
14 5283459 5288073 - Conep14aG0086000.1 Cone14ag0843 843
14 5303448 5305471 - Conep14aG0086100.1 Cone14ag0844 844
15 5973791 5981455 + Conep15aG0084600.1 Cone15ag0830 830
3 11452607 11462640 + Cp4.1LG03g10930.1 Cpe03g01426 1426
3 11478546 11479175 + Cp4.1LG03g10890.1 Cpe03g01427 1427
8 1655299 1663296 + Cp4.1LG08g04330.1 Cpe08g00253 253
8 1671271 1671894 + Cp4.1LG08g04270.1 Cpe08g00254 254
12 1301052 1303274 + Cp4.1LG12g02040.1 Cpe12g00202 202
12 1309047 1314328 + Cp4.1LG12g02050.1 Cpe12g00203 203
12 1320520 1327037 - Cp4.1LG12g02090.1 Cpe12g00204 204
12 1341445 1343247 + Cp4.1LG12g02020.1 Cpe12g00205 205
12 1342957 1350914 - Cp4.1LG12g02100.1 Cpe12g00206 206
17 880581 881444 - Cp4.1LG17g01400.1 Cpe17g00141 141
17 887695 895789 + Cp4.1LG17g01320.1 Cpe17g00142 142
17 897963 902193 - Cp4.1LG17g01430.1 Cpe17g00143 143
17 919674 921612 - Cp4.1LG17g01560.1 Cpe17g00144 144
5 5629216 5629845 - CrPI670011_05g006390.1 Cre05g0639 639
5 5651341 5653201 - CrPI670011_05g006440.1 Cre05g0644 644
5 5674219 5680305 + CrPI670011_05g006460.1 Cre05g0646 646
5 5681479 5694491 - CrPI670011_05g006470.1 Cre05g0647 647
6 7652294 7659454 + CrPI670011_06g013540.1 Cre06g1354 1354
6 7661666 7663857 - CrPI670011_06g013550.1 Cre06g1355 1355
6 7672287 7677094 - CrPI670011_06g013560.1 Cre06g1356 1356
6 7704239 7710202 + CrPI670011_06g013580.1 Cre06g1358 1358
6 7737564 7742741 - CrPI670011_06g013590.1 Cre06g1359 1359
6 7766926 7772083 + CrPI670011_06g013610.1 Cre06g1361 1361
6 7773340 7776642 - CrPI670011_06g013620.1 Cre06g1362 1362
3 10130704 10132104 - CsaV3_3G013420.1 Csa03g01342 1342
3 10147681 10149824 - CsaV3_3G013450.1 Csa03g01345 1345
3 10154240 10156473 + CsaV3_3G013460.1 Csa03g01346 1346
3 10167760 10177026 - CsaV3_3G013480.1 Csa03g01348 1348
3 2297330 2305003 + Hsped.03g01830.1 Hepe03g0183 183
3 2317226 2322593 - Hsped.03g01850.1 Hepe03g0185 185
3 2379299 2384792 - Hsped.03g01880.1 Hepe03g0188 188
3 2425277 2435102 + Hsped.03g01890.1 Hepe03g0189 189
5 65025844 65027149 + Hsped.05g15390.1 Hepe05g1539 1539
12 40085580 40089666 - Lag0016666.1 Lac12g2294 2294
12 40110714 40115618 + Lag0016667.1 Lac12g2295 2295
12 40126296 40132207 - Lag0016668.1 Lac12g2296 2296
12 40156068 40160523 + Lag0016670.1 Lac12g2298 2298
12 40172889 40180612 - Lag0016672.1 Lac12g2300 2300
11 39208850 39209473 + Maker00031325 Lcy11g1530 1530
13 2795702 2803963 + Maker00023649 Lcy13g0266 266
13 2805415 2809160 - Maker00023198 Lcy13g0267 267
13 2813532 2818291 - Maker00023546 Lcy13g0268 268
13 2866530 2871991 - Maker00024005 Lcy13g0271 271
13 2903679 2908343 + Maker00023641 Lcy13g0273 273
5 22189624 22190247 - Lsi05G014280.1 Lsi05g01428 1428
5 22202115 22215349 - Lsi05G014320.1 Lsi05g01432 1432
5 22221784 22223634 + Lsi05G014330.1 Lsi05g01433 1433
5 22236508 22251642 - Lsi05G014350.1 Lsi05g01435 1435
9 21154401 21158541 + Lsi09G013280.1 Lsi09g01328 1328
9 21159598 21166983 - Lsi09G013290.1 Lsi09g01329 1329
9 21184788 21190508 + Lsi09G013300.1 Lsi09g01330 1330
9 21206212 21214111 - Lsi09G013310.1 Lsi09g01331 1331
9 21238634 21244601 + Lsi09G013320.1 Lsi09g01332 1332
9 21250236 21257892 + Lsi09G013330.1 Lsi09g01333 1333
9 21265832 21276580 - Lsi09G013340.1 Lsi09g01334 1334
2 49242606 49243576 - Sed0026123.1 Sed02g1247 1247
4 33580308 33583307 - Sed0025285.1 Sed04g1889 1889
4 33587743 33594054 - Sed0006293.1 Sed04g1890 1890
9 14781331 14786732 - Sed0010229.1 Sed09g0766 766
9 14846616 14863650 + Sed0013933.1 Sed09g0767 767
9 14987461 15019620 - Sed0002312.1 Sed09g0770 770
12 5707787 5712210 + Sed0007778.1 Sed12g0910 910
6 77947310 77951789 - Tan0017632.1 Tan06g2529 2529
6 77991067 77997115 + Tan0006133.1 Tan06g2530 2530
6 78050140 78057251 + Tan0007623.1 Tan06g2535 2535
6 78062406 78064930 + Tan0022680.1 Tan06g2536 2536
6 78067026 78074536 - Tan0009833.1 Tan06g2537 2537
10 7122550 7123507 - Tan0010367.1 Tan10g0856 856
10 7151032 7154594 - Tan0002344.1 Tan10g0859 859
5 4804235 4828082 + Vvi5g469 Vvi5g469 469
5 4831092 4846705 + Vvi5g470 Vvi5g470 470
5 4851996 4853925 + Vvi5g471 Vvi5g471 471
5 4860980 4865193 - Vvi5g472 Vvi5g472 472
5 4868679 4873486 - Vvi5g473 Vvi5g473 473
5 4894749 4899096 + Vvi5g474 Vvi5g474 474
5 4912437 4920416 - Vvi5g475 Vvi5g475 475
5 4934966 4939395 + Vvi5g476 Vvi5g476 476
5 4942882 4943919 + Vvi5g477 Vvi5g477 477
5 4948288 4950406 - Vvi5g478 Vvi5g478 478
       

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