Doc-Alignment

  Inter-genomic and intra-genomic comparisons can help reveal the structural complexity of Cucurbitales genomes. We used V.vinifera as a reference, and by comparing homologous gene locus maps and Ks values between V.vinifera and other Cucurbitales, we could separate orthologous and paralogous genes produced by different polyploidization in the species genomes. We created a hierarchical lists of homologous genes using V.vinifera as a reference.
  The relevant gene ids can be obtained from the Cucurbitales blast and match under the Tools module. This link is Cucurbitales blast and match.

Orthogroup analysis platform
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Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g512 . . . Bda08g00569 . . Bma07g01601 Bma14g00510 . . . . Car02g01309 . . . . Bhi11g00211 Tan01g2012 . . . . . . . . . . . . . . . . . Csa05g00404 Chy09g01108 . Blo03g00415 . Bda07g00005 Bda09g00095 Bpe08g01434 Bpe11g00265 . . . . . . . . . . Cpe13g00226 Bhi12g00422 . . . . . . Cla01g00377 Cam01g0396 Cec01g0388 Cco01g0408 Clacu01g0397 Cmu01g0378 Cre09g2134 Lsi09g00408 . Chy06g02027 .
Vvi2g513 Blo02g01048 Blo03g00168 Bda06g00036 Bda08g00570 Bpe05g00587 Bpe07g00166 . . Cmo06g00791 Cmo16g01115 Cma02g01547 Cma15g01140 . Car15g01036 . Cpe14g00882 . Bhi11g00210 . . . . Mch10g1541 . Cla10g00275 Cam10g0284 Cec10g0292 Cco10g0289 Clacu10g0285 Cmu10g1125 Cre10g0533 . . Cone6ag0689 Cone9ag0691 Lsi07g01318 Csa05g00405 Chy09g01107 Cme06g02600 . . . . . . Bma05g00769 . . . Cmo15g01199 Cma06g00770 Cma16g01067 Car06g00688 Car16g01013 Cpe08g00748 Cpe13g00227 Bhi12g00423 . . . . . Lcy12g1809 Cla01g00378 Cam01g0397 Cec01g0389 Cco01g0409 Clacu01g0398 Cmu01g0379 Cre09g2133 Lsi09g00409 Csa03g00297 Chy06g02028 Cme09g01637
Vvi2g514 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi2g515 . . . . Bpe05g00586 . . . . . . Cma15g01138 . . Sed01g4008 . . Bhi11g00209 Tan01g2014 Cmetu09g0055 . . Mch10g1543 . Cla10g00273 Cam10g0282 Cec10g0290 Cco10g0287 Clacu10g0284 Cmu10g1124 Cre10g0532 . . Cone6ag0687 . Lsi07g01317 Csa05g00408 Chy09g01104 Cme06g02599 . . . . . . . . . . Cmo15g01197 . . . . . . Bhi12g00426 . . . . . Lcy12g1811 Cla01g00382 Cam01g0399 Cec01g0391 Cco01g0412 . . Cre09g2128 Lsi09g00412 Csa03g00295 . Cme09g01630
Vvi2g516 . . . Bda08g00572 Bpe05g00585 Bpe07g00168 Bma07g00990 . Cmo06g00792 . . Cma15g01136 . . Sed01g4005 . . Bhi11g00207 Tan01g2015 Cmetu06g0151 . Hepe06g1146 Mch10g1548 . . . . . . . . . . . . Lsi07g01314 Csa05g00410 Chy09g01101 . . . . Bda09g00096 . . Bma05g00768 Bma12g00635 . Cmo02g01588 Cmo15g01194 Cma06g00771 . . . . . Bhi12g00429 . . Lac11g2267 Hepe06g1140 . Lcy12g1814 Cla01g00384 Cam01g0400 Cec01g0393 Cco01g0414 . . Cre09g2126 Lsi09g00414 Csa03g00288 Chy06g02035 Cme09g01627
Vvi2g517 . . Bda06g00034 . . Bpe07g00169 . . Cmo06g00794 . . . . . . . . . . . . . . . Cla10g00268 Cam10g0276 Cec10g0286 Cco10g0280 Clacu10g0278 Cmu10g1118 Cre10g0527 Cone2ag0209 Cone16ag0834 Cone4ag0656 Cone7ag0615 Lsi07g01313 . . Cme06g02586 . . . . . . . Bma12g00636 . . . Cma06g00772 . Car06g00689 . Cpe08g00747 . . . . . . . . . . . . . . . . Csa03g00287 Chy06g02036 .
Vvi2g518 Blo02g01047 . . . . . Bma07g01600 . Cmo06g00795 . . Cma15g01133 . . Sed03g1246 . . Bhi11g00206 Tan01g2018 Cmetu06g2397 . . Mch10g1550 . Cla10g00267 Cam10g0275 Cec10g0283 Cco10g0279 Clacu10g0277 Cmu10g1117 Cre10g0526 . . . . Lsi07g01312 Csa05g00414 Chy09g01096 Cme06g02585 . Blo19g00256 . . Bpe08g01433 . . Bma12g00161 . . Cmo15g01192 Cma06g00775 . . . . . Bhi12g00431 . . Lac11g2276 . . Lcy12g1820 Cla01g00386 Cam01g0403 Cec01g0395 Cco01g0416 Clacu01g0404 Cmu01g0385 Cre09g2123 Lsi09g00416 Csa03g00286 Chy06g02037 Cme09g01625
Vvi2g519 . Blo03g00167 Bda06g00033 Bda08g00573 Bpe05g00584 Bpe07g00170 . . Cmo06g00796 Cmo16g01197 . . . . Sed04g1726 Cpe14g00950 . Bhi11g00205 Tan01g2019 Cmetu06g0268 . Hepe06g1139 Mch10g1552 . Cla10g00266 Cam10g0274 Cec10g0282 Cco10g0278 Clacu10g0276 Cmu10g1116 Cre10g0525 . . . . Lsi07g01311 . . Cme06g02584 . . . . . . Bma05g00767 Bma12g00638 . . . Cma06g00776 Cma16g01146 Car06g00690 Car16g01084 Cpe08g00746 . . . . . . . . . . . . . . . . Csa03g00285 Chy06g02038 .
Vvi2g520 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi2g521 . . . . . . . Bma14g00041 . . . Cma15g01128 . Car15g01033 . . . . . . . . . . . . . . . . . . . Cone6ag0679 Cone9ag0684 . Csa05g00415 Chy09g01095 . Blo03g00416 . Bda07g00006 . . Bpe11g00266 . . . . Cmo15g01187 . . . . . Cpe13g00228 Bhi12g00434 . . . . . Lcy12g1823 Cla01g00391 Cam01g0408 Cec01g0400 Cco01g0421 Clacu01g0409 Cmu01g0390 Cre09g2120 Lsi09g00417 . . Cme09g01623
   
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Gene_GFF

Select Chromosome Start End Strand Old_gene Gene Num
6 296723 299736 + Bda023202.1 Bda06g00033 33
6 302616 303065 + Bda023203.1 Bda06g00034 34
6 322260 324558 + Bda023205.1 Bda06g00036 36
7 75375 80554 + Bda025050.1 Bda07g00005 5
7 83066 90832 - Bda025051.1 Bda07g00006 6
8 5788366 5794881 + Bda029029.1 Bda08g00569 569
8 5807321 5810361 - Bda029030.1 Bda08g00570 570
8 5829892 5830287 - Bda029032.1 Bda08g00572 572
8 5834220 5836068 - Bda029033.1 Bda08g00573 573
9 1824771 1829345 + Bda030630.1 Bda09g00095 95
9 1836358 1836789 + Bda030631.1 Bda09g00096 96
11 4525507 4531295 + XM_039047223.1 Bhi11g00205 205
11 4562985 4563785 + XM_039049338.1 Bhi11g00206 206
11 4691245 4692018 - XM_039047754.1 Bhi11g00207 207
11 4959117 4959566 + XM_039050089.1 Bhi11g00209 209
11 5023121 5029510 + XM_039047331.1 Bhi11g00210 210
11 5051206 5059961 - XM_039049346.1 Bhi11g00211 211
12 13998866 14007509 + XM_039018898.1 Bhi12g00422 422
12 14076495 14080706 - XM_039020173.1 Bhi12g00423 423
12 14174493 14174903 + XM_039019846.1 Bhi12g00426 426
12 14348929 14349339 + XM_039019913.1 Bhi12g00429 429
12 14461933 14462389 + XM_039019939.1 Bhi12g00431 431
12 14530581 14534000 - XM_039050759.1 Bhi12g00434 434
2 40410877 40411344 + BLOR10777 Blo02g01047 1047
2 40454985 40462159 + BLOR10778 Blo02g01048 1048
3 4222379 4226127 + BLOR11348 Blo03g00167 167
3 4265054 4268226 + BLOR11349 Blo03g00168 168
3 12096021 12101167 + BLOR11596 Blo03g00415 415
3 12175808 12176927 - BLOR11597 Blo03g00416 416
19 14683761 14695689 + BLOR09599 Blo19g00256 256
5 44462381 44464247 + Bma031207 Bma05g00767 767
5 44517604 44517990 + Bma021867.1 Bma05g00768 768
5 44536492 44539517 + Bma021868.1 Bma05g00769 769
7 38514050 38514989 - Bma031391 Bma07g00990 990
7 51275234 51275704 - Bma031411 Bma07g01600 1600
7 51284187 51288637 - Bma026896.1 Bma07g01601 1601
12 2224403 2224891 - Bma007042.2 Bma12g00161 161
12 27600384 27600872 + Bma007812.1 Bma12g00635 635
12 27601778 27602617 - Bma007813.1 Bma12g00636 636
12 27625534 27627498 - Bma007816.1 Bma12g00638 638
14 530885 532054 - Bma030632 Bma14g00041 41
14 5688173 5692494 + Bma010941.1 Bma14g00510 510
5 19911479 19913320 + Bpe018000.1 Bpe05g00584 584
5 19915649 19916044 + Bpe018001.1 Bpe05g00585 585
5 19919970 19920356 + Bpe018002.1 Bpe05g00586 586
5 19929147 19932288 + Bpe018003.1 Bpe05g00587 587
7 1141900 1145491 - Bpe020976.1 Bpe07g00166 166
7 1157664 1158179 + Bpe026043 Bpe07g00168 168
7 1159143 1159814 - Bpe020978.1 Bpe07g00169 169
7 1162893 1164751 - Bpe020979.1 Bpe07g00170 170
8 15077000 15077458 - Bpe023547.2 Bpe08g01433 1433
8 15085682 15090185 - Bpe023548.2 Bpe08g01434 1434
11 1931008 1936002 + Bpe003641.1 Bpe11g00265 265
11 1937126 1938298 - Bpe003642.2 Bpe11g00266 266
1 4415594 4423834 + CaPI482276_01g003960.1 Cam01g0396 396
1 4435329 4438808 - CaPI482276_01g003970.1 Cam01g0397 397
1 4472279 4472662 + CaPI482276_01g003990.1 Cam01g0399 399
1 4477226 4477636 + CaPI482276_01g004000.1 Cam01g0400 400
1 4489658 4490068 + CaPI482276_01g004030.1 Cam01g0403 403
1 4521855 4523871 - CaPI482276_01g004080.1 Cam01g0408 408
10 4687334 4691822 + CaPI482276_10g002740.1 Cam10g0274 274
10 4707300 4707710 + CaPI482276_10g002750.1 Cam10g0275 275
10 4729825 4730547 + CaPI482276_10g002760.1 Cam10g0276 276
10 4788146 4788556 + CaPI482276_10g002820.1 Cam10g0282 282
10 4833261 4838916 + CaPI482276_10g002840.1 Cam10g0284 284
2 8711395 8712143 - Carg08776-RA Car02g01309 1309
6 4117002 4121121 - Carg25163-RA Car06g00688 688
6 4153285 4154025 - Carg25164-RA Car06g00689 689
6 4175335 4176760 - Carg25165-RA Car06g00690 690
15 8049745 8051441 + Carg23210-RA Car15g01033 1033
15 8149083 8152223 + Carg27916-RA Car15g01036 1036
16 8623372 8627472 - Carg23217-RA Car16g01013 1013
16 9316497 9321763 + Carg26184-RA Car16g01084 1084
1 4100755 4109067 + CcPI632755_01g004080.1 Cco01g0408 408
1 4119445 4122933 - CcPI632755_01g004090.1 Cco01g0409 409
1 4164289 4164699 + CcPI632755_01g004120.1 Cco01g0412 412
1 4176904 4177314 + CcPI632755_01g004140.1 Cco01g0414 414
1 4183289 4183699 + CcPI632755_01g004160.1 Cco01g0416 416
1 4216120 4218317 - CcPI632755_01g004210.1 Cco01g0421 421
10 3188695 3192995 + CcPI632755_10g002780.1 Cco10g0278 278
10 3207858 3208268 + CcPI632755_10g002790.1 Cco10g0279 279
10 3236151 3236882 + CcPI632755_10g002800.1 Cco10g0280 280
10 3310303 3310713 + CcPI632755_10g002870.1 Cco10g0287 287
10 3363561 3369205 + CcPI632755_10g002890.1 Cco10g0289 289
1 4108887 4117105 + CePI673135_01g003880.1 Cec01g0388 388
1 4126757 4130358 - CePI673135_01g003890.1 Cec01g0389 389
1 4166578 4166961 + CePI673135_01g003910.1 Cec01g0391 391
1 4177183 4177593 + CePI673135_01g003930.1 Cec01g0393 393
1 4187382 4187792 + CePI673135_01g003950.1 Cec01g0395 395
1 4219488 4221506 - CePI673135_01g004000.1 Cec01g0400 400
10 3333946 3338441 + CePI673135_10g002820.1 Cec10g0282 282
10 3353509 3353919 + CePI673135_10g002830.1 Cec10g0283 283
10 3399604 3400335 + CePI673135_10g002860.1 Cec10g0286 286
10 3469147 3469557 + CePI673135_10g002900.1 Cec10g0290 290
10 3513611 3519301 + CePI673135_10g002920.1 Cec10g0292 292
6 24265222 24271889 + Chy6G125550.1 Chy06g02027 2027
6 24284466 24291496 - Chy6G125560.1 Chy06g02028 2028
6 24505869 24506540 + Chy6G125630.1 Chy06g02035 2035
6 24521322 24522122 - Chy6G125640.1 Chy06g02036 2036
6 24539204 24539769 - Chy6G125650.1 Chy06g02037 2037
6 24547440 24550665 - Chy6G125660.1 Chy06g02038 2038
9 13236492 13237594 + Chy9G168110.1 Chy09g01095 1095
9 13248618 13249561 - Chy9G168120.1 Chy09g01096 1096
9 13269590 13274786 - Chy9G168170.1 Chy09g01101 1101
9 13280072 13286187 - Chy9G168200.1 Chy09g01104 1104
9 13312569 13316540 + Chy9G168230.1 Chy09g01107 1107
9 13324497 13330230 - Chy9G168240.1 Chy09g01108 1108
1 4053896 4062112 + ClG42_01g0039700.10 Clacu01g0397 397
1 4074377 4077851 - ClG42_01g0039800.10 Clacu01g0398 398
1 4129585 4129995 + ClG42_01g0040400.10 Clacu01g0404 404
1 4161538 4163551 - ClG42_01g0040900.10 Clacu01g0409 409
10 3486627 3491116 + ClG42_10g0027600.10 Clacu10g0276 276
10 3512092 3512502 + ClG42_10g0027700.10 Clacu10g0277 277
10 3532767 3533489 + ClG42_10g0027800.10 Clacu10g0278 278
10 3606143 3606553 + ClG42_10g0028400.10 Clacu10g0284 284
10 3646754 3652310 + ClG42_10g0028500.10 Clacu10g0285 285
1 4198875 4207720 + ClCG01G003910.2 Cla01g00377 377
1 4222987 4226476 - ClCG01G003920.1 Cla01g00378 378
1 4271585 4271995 + ClCG01G003930.1 Cla01g00382 382
1 4279851 4280261 + ClCG01G003935.1 Cla01g00384 384
1 4286295 4286705 + ClCG01G003940.1 Cla01g00386 386
1 4322307 4324433 - ClCG01G003970.2 Cla01g00391 391
10 3360792 3366369 + ClCG10G002830.2 Cla10g00266 266
10 3379451 3379861 + ClCG10G002835.1 Cla10g00267 267
10 3399887 3401181 + ClCG10G002840.2 Cla10g00268 268
10 3463551 3463961 + ClCG10G002895.1 Cla10g00273 273
10 3504272 3510672 + ClCG10G002910.1 Cla10g00275 275
2 8780074 8783002 + CmaCh02G015470.1 Cma02g01547 1547
6 3940348 3944279 - CmaCh06G007700.1 Cma06g00770 770
6 3957914 3958330 - CmaCh06G007710.1 Cma06g00771 771
6 3976402 3977142 - CmaCh06G007720.1 Cma06g00772 772
6 4004267 4004677 - CmaCh06G007750.1 Cma06g00775 775
6 4007233 4013975 - CmaCh06G007760.1 Cma06g00776 776
15 7178372 7180570 + CmaCh15G011280.1 Cma15g01128 1128
15 7198636 7199046 - CmaCh15G011330.1 Cma15g01133 1133
15 7219132 7219506 - CmaCh15G011360.1 Cma15g01136 1136
15 7227211 7227585 - CmaCh15G011380.1 Cma15g01138 1138
15 7244611 7248198 + CmaCh15G011400.1 Cma15g01140 1140
16 8166490 8171306 - CmaCh16G010670.1 Cma16g01067 1067
16 8803741 8809433 + CmaCh16G011460.1 Cma16g01146 1146
6 32847319 32851006 + MELO3C013951.2.1 Cme06g02584 2584
6 32859343 32860106 + MELO3C013952.2.1 Cme06g02585 2585
6 32874311 32875449 + MELO3C013953.2.1 Cme06g02586 2586
6 33137468 33138246 + MELO3C013958.2.1 Cme06g02599 2599
6 33188601 33195135 + MELO3C013960.2.1 Cme06g02600 2600
9 20989032 20991991 + MELO3C005539.2.1 Cme09g01623 1623
9 21006001 21006659 - MELO3C005541.2.1 Cme09g01625 1625
9 21012307 21012992 - MELO3C005542.2.1 Cme09g01627 1627
9 21053023 21053715 - MELO3C005549.2.1 Cme09g01630 1630
9 21087635 21091820 + MELO3C005553.2.1 Cme09g01637 1637
6 28471115 28471853 + PI0022635.1 Cmetu06g0151 151
6 28537031 28540974 - PI0005299.1 Cmetu06g0268 268
6 28529065 28529953 - PI0003111.1 Cmetu06g2397 2397
9 3126305 3127410 + PI0020678.1 Cmetu09g0055 55
2 9157087 9157506 - CmoCh02G015880.1 Cmo02g01588 1588
6 4169077 4173603 - CmoCh06G007910.1 Cmo06g00791 791
6 4189023 4189433 - CmoCh06G007920.1 Cmo06g00792 792
6 4207908 4208648 - CmoCh06G007940.1 Cmo06g00794 794
6 4236234 4236644 - CmoCh06G007950.1 Cmo06g00795 795
6 4239387 4245540 - CmoCh06G007960.1 Cmo06g00796 796
15 8240313 8245327 + CmoCh15G011870.1 Cmo15g01187 1187
15 8263393 8263803 - CmoCh15G011920.1 Cmo15g01192 1192
15 8271696 8272106 - CmoCh15G011940.1 Cmo15g01194 1194
15 8286418 8286792 - CmoCh15G011970.1 Cmo15g01197 1197
15 8315063 8318270 + CmoCh15G011990.1 Cmo15g01199 1199
16 7887437 7891875 - CmoCh16G011150.1 Cmo16g01115 1115
16 8542766 8547943 + CmoCh16G011970.1 Cmo16g01197 1197
1 4000583 4008797 + CmPI595203_01g003780.1 Cmu01g0378 378
1 4021047 4024524 - CmPI595203_01g003790.1 Cmu01g0379 379
1 4076303 4076713 + CmPI595203_01g003850.1 Cmu01g0385 385
1 4108265 4110278 - CmPI595203_01g003900.1 Cmu01g0390 390
10 3611688 3616177 + CmPI595203_10g011160.1 Cmu10g1116 1116
10 3629225 3629635 + CmPI595203_10g011170.1 Cmu10g1117 1117
10 3649909 3650631 + CmPI595203_10g011180.1 Cmu10g1118 1118
10 3714775 3715185 + CmPI595203_10g011240.1 Cmu10g1124 1124
10 3763561 3769124 + CmPI595203_10g011250.1 Cmu10g1125 1125
2 1099183 1099978 + Conep02aG0021400.1 Cone2ag0209 209
4 3121566 3123126 + Conep04aG0067900.1 Cone4ag0656 656
6 3442801 3444017 + Conep06aG0070100.1 Cone6ag0679 679
6 3465276 3465620 - Conep06aG0070900.1 Cone6ag0687 687
6 3480139 3482994 + Conep06aG0071100.1 Cone6ag0689 689
7 3009073 3011275 + Conep07aG0063100.1 Cone7ag0615 615
9 3263979 3265198 + Conep09aG0070100.1 Cone9ag0684 684
9 3311531 3314564 + Conep09aG0070800.1 Cone9ag0691 691
16 8991064 8992175 - Conep16aG0320100.1 Cone16ag0834 834
8 5932462 5938638 + Cp4.1LG08g07450.1 Cpe08g00746 746
8 5973778 5975006 + Cp4.1LG08g07460.1 Cpe08g00747 747
8 6006789 6010830 + Cp4.1LG08g07500.1 Cpe08g00748 748
13 1717144 1723278 + Cp4.1LG13g02230.1 Cpe13g00226 226
13 1728382 1731388 - Cp4.1LG13g02260.1 Cpe13g00227 227
13 1796999 1799098 - Cp4.1LG13g02350.1 Cpe13g00228 228
14 7302086 7306741 - Cp4.1LG14g08830.1 Cpe14g00882 882
14 8008037 8012960 + Cp4.1LG14g09440.1 Cpe14g00950 950
9 40188211 40190392 + CrPI670011_09g021200.1 Cre09g2120 2120
9 40206039 40206461 + CrPI670011_09g021230.1 Cre09g2123 2123
9 40223874 40224284 - CrPI670011_09g021260.1 Cre09g2126 2126
9 40234070 40234480 - CrPI670011_09g021280.1 Cre09g2128 2128
9 40275112 40278619 + CrPI670011_09g021330.1 Cre09g2133 2133
9 40288584 40297015 - CrPI670011_09g021340.1 Cre09g2134 2134
10 4596853 4601334 + CrPI670011_10g005250.1 Cre10g0525 525
10 4614482 4614892 + CrPI670011_10g005260.1 Cre10g0526 526
10 4635653 4636378 + CrPI670011_10g005270.1 Cre10g0527 527
10 4700160 4700570 + CrPI670011_10g005320.1 Cre10g0532 532
10 4750404 4756099 + CrPI670011_10g005330.1 Cre10g0533 533
3 2317555 2321725 + CsaV3_3G002850.1 Csa03g00285 285
3 2321727 2328268 + CsaV3_3G002860.1 Csa03g00286 286
3 2343747 2344962 + CsaV3_3G002870.1 Csa03g00287 287
3 2348859 2350076 - CsaV3_3G002880.1 Csa03g00288 288
3 2427151 2428410 + CsaV3_3G002950.1 Csa03g00295 295
3 2456721 2464079 + CsaV3_3G002970.1 Csa03g00297 297
5 2663368 2671331 + CsaV3_5G004040.1 Csa05g00404 404
5 2676969 2681210 - CsaV3_5G004050.1 Csa05g00405 405
5 2712454 2712786 + CsaV3_5G004080.1 Csa05g00408 408
5 2718419 2719080 + CsaV3_5G004100.1 Csa05g00410 410
5 2737344 2738284 + CsaV3_5G004140.1 Csa05g00414 414
5 2751454 2758923 - CsaV3_5G004150.1 Csa05g00415 415
6 60477050 60485213 + Hsped.06g11390.1 Hepe06g1139 1139
6 60506485 60506892 + Hsped.06g11400.1 Hepe06g1140 1140
6 60665772 60666176 + Hsped.06g11460.1 Hepe06g1146 1146
11 38794608 38795021 + Lag0032905.1 Lac11g2267 2267
11 38839567 38839956 - Lag0032914.1 Lac11g2276 2276
12 39217025 39220753 - Maker00038204 Lcy12g1809 1809
12 39258186 39258599 + Maker00037857 Lcy12g1811 1811
12 39276246 39276659 + Maker00037925 Lcy12g1814 1814
12 39335299 39335766 - Maker00038212 Lcy12g1820 1820
12 39350938 39353383 - Maker00037952 Lcy12g1823 1823
7 19149419 19155676 + Lsi07G013110.1 Lsi07g01311 1311
7 19168704 19169051 + Lsi07G013120.1 Lsi07g01312 1312
7 19191393 19192121 + Lsi07G013130.1 Lsi07g01313 1313
7 19209800 19223090 - Lsi07G013140.1 Lsi07g01314 1314
7 19266257 19266667 + Lsi07G013170.1 Lsi07g01317 1317
7 19310712 19318314 + Lsi07G013180.1 Lsi07g01318 1318
9 4341826 4352295 + Lsi09G004080.1 Lsi09g00408 408
9 4358759 4362516 - Lsi09G004090.1 Lsi09g00409 409
9 4410095 4410505 + Lsi09G004120.1 Lsi09g00412 412
9 4422721 4423143 + Lsi09G004140.1 Lsi09g00414 414
9 4439825 4441653 - Lsi09G004160.1 Lsi09g00416 416
9 4441686 4444057 - Lsi09G004170.1 Lsi09g00417 417
10 15416931 15423507 - MC10g1218 Mch10g1541 1541
10 15453784 15454188 - MC10g1220 Mch10g1543 1543
10 15499633 15499899 + MC10g1225 Mch10g1548 1548
10 15531089 15531493 - MC10g1227 Mch10g1550 1550
10 15542508 15550581 - MC10g1229 Mch10g1552 1552
1 69091538 69092279 - Sed0017326.1 Sed01g4005 4005
1 69107791 69108698 - Sed0021316.1 Sed01g4008 4008
3 7979068 7979478 + Sed0001758.1 Sed03g1246 1246
4 31897134 31902335 + Sed0015074.1 Sed04g1726 1726
1 22569295 22577989 + Tan0004004.2 Tan01g2012 2012
1 22630559 22630975 - Tan0012650.1 Tan01g2014 2014
1 22654034 22655048 + Tan0008612.1 Tan01g2015 2015
1 22756671 22757477 - Tan0016646.1 Tan01g2018 2018
1 22783238 22796770 - Tan0018008.1 Tan01g2019 2019
2 5078323 5098974 + Vvi2g512 Vvi2g512 512
2 5105825 5110126 - Vvi2g513 Vvi2g513 513
2 5116473 5116683 + Vvi2g514 Vvi2g514 514
2 5125429 5126116 - Vvi2g515 Vvi2g515 515
2 5131035 5131778 + Vvi2g516 Vvi2g516 516
2 5134355 5135658 - Vvi2g517 Vvi2g517 517
2 5141539 5142274 - Vvi2g518 Vvi2g518 518
2 5147925 5157582 - Vvi2g519 Vvi2g519 519
2 5158143 5159790 + Vvi2g520 Vvi2g520 520
2 5164313 5166352 - Vvi2g521 Vvi2g521 521
       

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